Elmaliki, Kristine

No ORCID on file · 28 papers in corpus · active 2022

Study types

  • other 22
  • article 6

Condition tags

  • endometriosis 28
  • infertility 2
other 2022
·doi:10.6084/m9.figshare.21117815.v1

Additional file 10. A reanalysis of endometriosis cases and controls after removal of one subject on hormones. The Log2 odd ratios (OR) with cell subsets enriched in controls (n=9) on the left and cell subsets enriched in cases (n=10) on th…

other 2022
·doi:10.6084/m9.figshare.21117815

Additional file 10. A reanalysis of endometriosis cases and controls after removal of one subject on hormones. The Log2 odd ratios (OR) with cell subsets enriched in controls (n=9) on the left and cell subsets enriched in cases (n=10) on th…

other 2022
·doi:10.6084/m9.figshare.21117818

Additional file 11. A reanalysis of stromal cells from endometriosis cases (n=10) and controls (N=9) after removal of one subject on hormones. Not surprisingly, this revised figure shows alterations in the spatial distribution of the UMAP c…

other 2022
·doi:10.6084/m9.figshare.21117818.v1

Additional file 11. A reanalysis of stromal cells from endometriosis cases (n=10) and controls (N=9) after removal of one subject on hormones. Not surprisingly, this revised figure shows alterations in the spatial distribution of the UMAP c…

other 2022
·doi:10.6084/m9.figshare.21117824.v1

Additional file 12. Stromal cells exhibit distinguishing gene markers differentially regulated in ME from endometriosis cases (n=11) and controls (n=9). Violin plots of the top 10 genes that distinguish endometriosis cases and controls with…

other 2022
·doi:10.6084/m9.figshare.21117824

Additional file 12. Stromal cells exhibit distinguishing gene markers differentially regulated in ME from endometriosis cases (n=11) and controls (n=9). Violin plots of the top 10 genes that distinguish endometriosis cases and controls with…

other 2022
·doi:10.6084/m9.figshare.21117827

Additional file 13. uNK cells exhibit distinguishing gene markers differentially regulated in ME from endometriosis cases and controls. Violin plots of the top 10 genes that distinguish endometriosis cases (n=11) and controls (n=9) in an an…

other 2022
·doi:10.6084/m9.figshare.21117827.v1

Additional file 13. uNK cells exhibit distinguishing gene markers differentially regulated in ME from endometriosis cases and controls. Violin plots of the top 10 genes that distinguish endometriosis cases (n=11) and controls (n=9) in an an…

other 2022
·doi:10.6084/m9.figshare.21117833

Additional file 1. Comparison of UMAP plots of ME digests using fresh cells vs. methanol fixation. Virtually identical UMAP plots are observed using either fresh or methanol fixed cells from a single subject. The ME samples were prepared by…

other 2022
·doi:10.6084/m9.figshare.21117833.v1

Additional file 1. Comparison of UMAP plots of ME digests using fresh cells vs. methanol fixation. Virtually identical UMAP plots are observed using either fresh or methanol fixed cells from a single subject. The ME samples were prepared by…

article 2022
·doi:10.6084/m9.figshare.21117839

Additional file 2. Markers for UMAP plots of major cell clusters.

article 2022
·doi:10.6084/m9.figshare.21117839.v1

Additional file 2. Markers for UMAP plots of major cell clusters.

other 2022
·doi:10.6084/m9.figshare.21117842.v1

Additional file 3. Cell cluster composition of ME is similar when ME is analyzed after enrichment for endometrial tissues and digested or analyzed as digested whole ME. Comparison of UMAP plots is shown for ME samples prepared by tissue enr…

other 2022
·doi:10.6084/m9.figshare.21117842

Additional file 3. Cell cluster composition of ME is similar when ME is analyzed after enrichment for endometrial tissues and digested or analyzed as digested whole ME. Comparison of UMAP plots is shown for ME samples prepared by tissue enr…

other 2022
·doi:10.6084/m9.figshare.21117845.v1

Additional file 4. Cell clusters of ME samples distinguish endometriosis cases and symptomatic cases vs. controls. The combined UMAP plot shown in Fig. 1 is split into controls (n = 9), cases (n = 11), and subjects with suggestive symptoms …

other 2022
·doi:10.6084/m9.figshare.21117845

Additional file 4. Cell clusters of ME samples distinguish endometriosis cases and symptomatic cases vs. controls. The combined UMAP plot shown in Fig. 1 is split into controls (n = 9), cases (n = 11), and subjects with suggestive symptoms …

article 2022
·doi:10.6084/m9.figshare.21117848.v1

Additional file 5. Top 10 genes in groups 2 and 4 stromal cell subclusters from Figs. 5 and 6.

article 2022
·doi:10.6084/m9.figshare.21117848

Additional file 5. Top 10 genes in groups 2 and 4 stromal cell subclusters from Figs. 5 and 6.

article 2022
·doi:10.6084/m9.figshare.21117851.v1

Additional file 6. References for genes described in Fig. 6.

article 2022
·doi:10.6084/m9.figshare.21117851

Additional file 6. References for genes described in Fig. 6.

other 2022
·doi:10.6084/m9.figshare.21117854

Additional file 7. Stromal cell subclusters in ME samples map to stromal cell clusters found in first trimester decidua. We have compared the mapping of stromal subclusters reported by Vento-Tormo [26], based on the analysis of decidua in t…

other 2022
·doi:10.6084/m9.figshare.21117854.v1

Additional file 7. Stromal cell subclusters in ME samples map to stromal cell clusters found in first trimester decidua. We have compared the mapping of stromal subclusters reported by Vento-Tormo [26], based on the analysis of decidua in t…

other 2022
·doi:10.6084/m9.figshare.21117857.v1

Additional file 8. uNK subclusters reveal a proliferating uNK subcluster enriched in control ME. We have examined subclusters of uterine NK (uNK) cells in our dataset and identified a subcluster whose gene expression patterns reflect cell p…

other 2022
·doi:10.6084/m9.figshare.21117857

Additional file 8. uNK subclusters reveal a proliferating uNK subcluster enriched in control ME. We have examined subclusters of uterine NK (uNK) cells in our dataset and identified a subcluster whose gene expression patterns reflect cell p…

other 2022
·doi:10.6084/m9.figshare.21117860.v1

Additional file 9. The UMAP plot derived from a reanalysis of endometriosis cases (n=10) and controls (n=9) after removal of one subject on hormones. For this reanalysis, a total of 1112 singlet cells were eliminated from the ME-tissue run …