Omphalolith: An underdiagnosed entity

Case report OA: gold public-domain-us
⚙ AI-generated summary by qwen3.7-flash, 2026-09-26 ⓘ

This case report presents two new instances of omphalolith, a rare umbilical condition caused by sebum and keratin accumulation, to highlight its underdiagnosis and the importance of early recognition.

One-sentence paraphrase of the abstract; not a substitute for reading it. No clinical advice. How this works

⚙ AI-generated deep summary by qwen3.7-flash, 2026-09-07 · read from full text ⓘ

This case report describes two patients presenting with omphalolith, a rare benign condition characterized by the accumulation of sebum and keratin in the umbilicus. The authors detail clinical features such as firm, pigmented nodules and emphasize that early recognition is crucial to prevent complications like infection or unnecessary invasive investigations. The paper highlights differential diagnoses for umbilical masses, noting that while malignancies must be ruled out, benign entities like omphalolith are often underdiagnosed due to lack of awareness. Relevance to endometriosis: listed as one of the differential diagnoses for umbilical nodules, though the paper's main focus is on this distinct benign entity.

Read from the paper's body, not the abstract. Not a substitute for reading the paper. No clinical advice. How this works

Abstract

Omphalolith is a rare and underdiagnosed entity due to the accumulation of sebum and keratin in the umbilicus. It usually occurs in the elderly with deep and narrow umbilicus. Early recognition of omphalolith is important to prevent complications, unnecessary investigations, and anxiety. We report herein two new cases of omphalolith.
Full text 6,672 characters · extracted from pmc-nxml · 6 sections · click to expand

Case

A 28‐year‐old female patient presented with a dark nodule on the umbilicus. She did not report pain, bleeding, discharge, or trauma and denied recent fever or weight loss. Past medical history was consistent with Wilson's disease with cirrhosis and hyperkinetic extrapyramidal symptoms. She was entirely dependent on her mother for daily activities. Clinical examination revealed a firm, keratotic, black nodule protruding out of the umbilicus, measuring 2 × 1 cm (Figure  1A ). The surrounding skin was otherwise normal. Gentle traction of the nodule using dermal forceps allowed its extraction (Figure  1B ). The underlying skin did not show signs of inflammation. Histopathological examination revealed laminated keratin (Figure  1C ). The diagnosis of omphalolith was made. Proper hygiene was advised. (A) Black nodule of the ombilicus (black arrow); (B) Omphalolith after removal. Three black nodules with horny‐like projections (black arrow); (C) Histopathological aspect of the omphalolith showing laminated keratin (black arrow) (HE x20) A 54‐year‐old obese female patient with no medical history presented with a firm, keratotic, brownish nodule protruding out of the umbilicus, measuring 1.5 × 1 cm (Figure  2A ). The surrounding skin was otherwise normal. Dermoscopic examination revealed a dry crusted pigmented lamellar keratotic material (Figure  2B ). The diagnosis of omphalolith was suspected. After 15 mn application of petroleum jelly, gentle traction using dermal forceps allowed its extraction (Figure  2C ). It revealed a narrow and deep umbilicus with no signs of inflammation or ulceration (Figure  2D ). The patient was reassured of the benign character of the condition, and proper body hygiene was advised. (A) Keratotic, brownish nodule protruding out of the umbilicus (black arrow); (B) Omphalolith after removal: black keratotic nodule (black arrow); (C) Narrow and deep umbilicus with no signs of inflammation or ulceration; (D) Dermoscopic aspect: dry crusted pigmented lamellar keratotic material (black arrow)

Author

Dr Wafa jouini and Pr Noureddine Litaiem contributed to the first draft of the manuscript, took the clinical pictures, and managed the literature search. Pr Faten Zeglaoui revised and approved the final version of the manuscript. All the authors contributed to and have approved the final manuscript.

Ethical

Personal data have been respected.

Discussion

Omphalolith or umbilical concretion is a rare and benign affection due to the accumulation of sebum and keratin in the umbilicus. 3 , 4 It usually presents as a firm black mass. The pigmented color of the majority of omphaloliths is explained by melanin accumulation and lipid oxidation. 5 Omphalolith mainly affects elderly women with deep and narrow umbilicus and poor corporal hygiene. 6 Obesity is another predisposing factor. 6 , 7 In the first case, a deep and retracted umbilicus associated with insufficient hygiene led to the formation of the omphalolith in a young and non‐obese female patient. Having Wilson's disease with neurological symptoms and being dependent on her mother may explain insufficient hygiene in this case. In the second case, a narrow and deep umbilicus associated with obesity predispose to omphalolith. Omphalolith usually remains asymptomatic for several years. It can be noticed by chance or after secondary complications. 4 Repetitive trauma can cause irritation, erosions, bleeding, and pyogenic granuloma. Secondary infection, abscess formation, cellulite, or even peritonitis can also be the revealing symptoms of this condition. 4 , 5 , 7 The diagnosis of omphalolith is based on clinical examination. Dermoscopy shows aggregates of pigmented keratin. If a histopathological examination is performed, it reveals laminated keratin associated with amorphous sebaceous material. Differential diagnoses include malignant tumors comprising Mary Joseph's nodule and malignant melanoma. Benign affections can mimic umbilical concretion such as keloids, umbilical endometriosis, dermatofibroma, cholesteatoma, foreign bodies like terminal hairs (trichobezoar), and persistent omphalomesenteric duct. 1 , 3 , 7 Therefore, early recognition of omphalolith is important to prevent unnecessary investigations. However, in some difficult and complicated cases, imaging like magnetic resonance imaging (MRI) can be useful to rule out an umbilical sinus. 2 The treatment consists of a gentle extraction of the calculus using forceps. 6 , 7 In our cases, it allowed the extraction of the entire mass with no bleeding. A prior softening with glycerin or olive oil may facilitate its extraction. 7 Excision of an associated pyogenic granuloma can be necessary in some cases. Patients' education on proper corporeal hygiene is paramount to prevent recurrences. 4 , 5 , 7 The excision of the umbilicus may be recommended in some recalcitrant cases. 1 In conclusion, omphalolith is an underdiagnosed condition due to poor awareness of its clinical characteristics. The treatment is simple and consists of the extraction of the mass with forceps. However, a delay in the diagnosis and treatment may lead to complications, mainly infections. Omphalolith should be included in the differential diagnosis of an umbilical nodule to avoid misdiagnosis and unnecessary overtreatment. The prevention focuses on patients' education about the importance of personal hygiene.

Conclusions

Written informed consent was obtained from the patient to publish this report in accordance with the journal's patient consent policy.

Introduction

The umbilicus is a remaining scar in the center of the abdomen following the removal of the umbilical cord. 1 It has different shapes. Multiple affections can raise in this area including metastasis (Mary Joseph's nodule) and endometriosis. Less commonly reported yet benign conditions are important to diagnose. Omphalolith, also known as omphalokeratolith, omphalith, or umbolith, 2 is a rare and underdiagnosed entity due to the accumulation of sebum and keratin in the umbilicus. Omphalolith is derived from two Greek words: omphalos (navel) and lithos (stone). 3 It usually occurs in the elderly with deep and narrow umbilicus. Neglect and poor corporal hygiene represent the main risk factors. Early recognition of omphalolith is important to prevent unnecessary investigations and anxiety. Delayed diagnosis may lead to complications including irritation, erosions, bleeding, pyogenic granuloma, abscess formation, cellulitis, or even peritonitis. We report herein two new cases of omphalolith and provide a comprehensive summary of its characteristics.

Text is read by the "Ask this paper" AI Q&A widget below. Extraction quality varies by source — PMC NXML preserves structure cleanly, OA-HTML may include some navigation residue, and OA-PDF can have broken hyphenation. The publisher copy (via DOI) is the canonical version.

My notes (saved in your browser only)

⚙ Ask this paper AI returns verbatim quotes from the full text · source: pmc-nxml ⓘ

Answers must be backed by verbatim quotes from this paper's full text. Hallucinated quotes are dropped automatically; if no verbatim passage answers the question, we say so. How this works

Citation neighborhood (no data yet)

We don't have any in-corpus citations linked to this paper yet. The paper's references may be in our DB but unresolved to ``paper_id`` (resolution happens at ingest when the cited DOI matches a row we already have). Run the cross-source citation reconcile pass to retry.

Source provenance

europepmc
last seen: 2026-10-04T09:26:46.659050+00:00
pubmed
last seen: 2026-10-08T21:37:06.835816+00:00
License: public-domain-us · commercial use OK · attribution required
Courtesy of the U.S. National Library of Medicine