Partitioning the colonization and extinction components of beta diversity: Spatiotemporal species turnover across disturbance gradients

ABSTRACT Changes in species diversity often result from species losses and gains. The dynamic nature of beta diversity (i.e., spatial variation in species composition) that derives from such temporal species turnover, however, has been largely overlooked. Here, we disentangled extinction and colonization components of beta diversity by using the sets of species that went locally extinct and that newly colonized the given sites. We applied this concept of extinction and colonization beta diversity to plant communities that have been repeatedly measured in experimentally disturbed forests. We first found no difference in beta diversity across disturbance gradients when it was analyzed for communities at a single point in time. From this result, we might conclude that disturbance caused no impact on how species assemble across space. However, when we analyzed the extinction and colonization beta diversity, both measures were found to be significantly lower in disturbed sites compared to undisturbed sites. These results indicate that disturbance removed similar subsets of species across space, making communities differentiate, but at the same time induced spatially uniform colonization of new species, causing communities to homogenize. Consequently, the effects of these two processes canceled each other out. The relative importance of extinction and colonization components per se also changed temporally after disturbance. Analyses using extinction and colonization beta diversity allowed us to detect nonrandom dis- and re-assembly dynamics in plant communities. Our results suggest that common practices of analyzing beta diversity at one point in time can mask significant variation driven by disturbance. Acknowledging the extinction–colonization dynamics behind beta diversity is essential for understanding the spatiotemporal organization of biodiversity.