bioSyntax: Syntax Highlighting For Computational Biology
preprint
OA: closed
Abstract
Computational biology requires the reading and comprehension of biological data files. Plain-text formats such as SAM, VCF, GTF, PDB and FASTA, often contain critical information that is obfuscated by the complexity of the data structures. bioSyntax ( http://bioSyntax.org ) is a freely available suite of syntax highlighting packages for vim, gedit, Sublime , and less , which aids computational scientists to parse and work with their data more efficiently.
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