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Long-term proxy records could help understand the impact of elevated CO2 on tropical vegetation. We provide observationally inferred evidence that the evolution of the Atlantic Forest in SE Brazil between ~ 150 and 65 ka was influenced by CO2 variability rather than temperature or precipitation on both precessional and millennial time scales. Plant wax n-alkanes in a marine core were used to trace forest cover fluctuations and compared with continental records of fossil pollen, revealing a strong correlation with CO2 levels. This highlights CO2 fertilization as a key driver of the past Atlantic Forest evolution, emphasizing the need for protection initiatives to preserve its long-term capacity in carbon storage. Further research is needed to understand the long-term effects of CO2 on tropical forests at the ecosystem scale. Figures Figure 1 Figure 2 Figure 3 Figure 4 Introduction The Neotropical Atlantic Forest is one of the world’s most biodiverse and endangered ecosystems 1,2 that originally covered 12 % of Brazil’s national territory with a latitudinal range of ca. 29° extending into tropical and subtropical regions (Figure 1). The massive agricultural expansion with the arrival of European colonists in the 16 th century, followed by intense industrialization and urban development, has resulted in an impressive habitat loss. Currently, the Atlantic Forest is confined to only ca . 7 % of its original extent 3 and composed of small, isolated, and degraded fragments, making this ecosystem a global priority for biodiversity conservation 2–4 . Tropical forests, like the Atlantic Forest, are characterized by the dominance of tree life forms, creating a closed canopy and complex arrangements that provide diverse ecosystem services 5 . Among these, carbon uptake is the most recognized, with about one-third of anthropogenic carbon dioxide emitted being removed by such forests 6 . Carbon uptake in terrestrial ecosystems seems to have increased globally 7 , likely due to the fertilization effect of rising CO 2 levels. Indeed, one of the primary expected effects of higher atmospheric CO 2 is an increase in the photosynthetic rate and a decrease in the transpiration rate occurring at the enzymatic and stomatal scales, which ultimately regulates C uptake 8–10 . This effect may result in important negative feedback on anthropogenic-induced global warming 11 , 12 . Otherwise, studies argue that this capacity is not being sustained because increasing air temperature and reduced water availability would raise plant respiration exponentially, reducing forest productivity 13,14 . Such conflicting conclusions emphasize our poor understanding of the long-term response of tropical forests to rising CO 2 levels. In this regard, paleoclimate data may provide relevant insight for investigating past vegetation changes under naturally varying atmospheric CO 2 concentrations at different time scales. Leaf gas-exchange modeling on temperate and tropical fossil flora from the early Miocene suggests enhanced leaf-level productivity and water-use efficiency under elevated CO 2 (~ 450-550 ppm), which likely contributed to forest survival in climates where currently tropical savannas and grasslands dominate 15 . In the Quaternary, the triple isotopic ratio of atmospheric oxygen recovered from Antarctica ice cores indicates that marine and terrestrial biosphere productivity changes coeval to glacial-interglacial variability, with the latter largely driven by atmospheric CO 2 16 . In subtropical SE Africa, the main extension of woodlands during the Pleistocene occurred under interglacial conditions of raised CO 2 even though these intervals were regionally drier than glacial periods 17 . Likewise, the Pleistocene evolution of NW African savanna ecosystems was strongly controlled by atmospheric p CO2, whereby rising atmospheric carbon dioxide led to increased woody cover 18 . Tropical forests in South America experienced a marked expansion since the Last Glacial Maximum (LGM), leading to a 20%-100% increase in carbon storage 19 . For the Atlantic forest realm, the increase in carbon storage was estimated in the order of 4.9 10 9 tC (55%), making this biome an important locus for atmospheric CO 2 sequestration 19 . Changes in past vegetation cover/dynamics of the Atlantic forest have usually been ascribed to climate (i.e., temperature and moisture), while the (possible) control of atmospheric CO 2 has not been strongly explored 20,21 . Here, we investigate an 85 kyr time interval from late Marine Isotope Stage (MIS) 6 to early MIS 4, which spans over glacial, transitional, and interglacial climate phases, encompassing a large range of CO 2 conditions (from ~ 200 to ~280 ppm) 22,23 and includes periods of different monsoonal rainfall regimes in the South America 24,25 . We provide a record of vegetation changes from plant wax composition and soil-derived discharges based on the abundance of branched glycerol dialkyl glycerol tetraether in a marine sediment core from the continental slope of SE Brazil (GL-1090, 24.92 ºS, 42.51 ºW, 2225 m water depth) 26,27 . The core site receives terrestrial inputs through runoff from the adjacent hinterland that hosts the central and south areas of the South American Atlantic Forest 28 . We discuss our records with regional pollen data, monsoonal precipitation, and global CO 2 concentrations. Our findings sustain that under natural climate variability, the atmospheric CO 2 concentration is the key driver of the Atlantic Forest changes (arboreal cover) on precessional and millennial time scales. A potential vegetation simulation with the CPTEC-PVM2 model 29 corroborates this interpretation. Our data support the effect of CO 2 fertilization over the Atlantic Forest and urge protection and reforestation initiatives to preserve its natural long-term capacity in carbon storage. Results A suite of long chain odd-carbon numbered homologs dominates the distribution of n -alkanes and is typical of inputs from epicuticular waxes of terrestrial higher plants 32 . Their Average Chain Length (ACL) varies between 29.6 and 30.7 and exhibits glacial-interglacial oscillations (Figure 2a), with generally higher values during full glacial or cold MIS 5 substages (MIS 5d and 5b). The largest ACL change (~ 0.7) occurs at the transition from the penultimate glacial maximum (late MIS 6) to the Last Interglacial (MIS 5e), where relatively steady low ACL values (~ 29.7) dominate the pattern. From early MIS 5e toward MIS 4, a Mann-Kendall statistically significant increasing trend exists (p < 0.01), leading the ACL from its low Last Interglacial to higher full glacial values (~ 30.4). The long-term increasing ACL trend is overprinted by rapid, millennial-scale, negative excursions (~ 0.3 – 0.4), mainly during the warm MIS 5c and 5a substages. Branched glycerol dialkyl glycerol tetraethers (brGDGTs) concentrations vary between 0 and 250ng/g of dry sediment. Their variations in core GL-1090 follow the ACL pattern (Figure 2a), whereby lower concentrations are generally followed by reduced ACL, with the lowest values observed during MIS 5e. Rapid millennial-scale spikes lead brGDGT from its lower baseline to peaks of ~ 150 – 200 ng/g, mainly at the transition from late MIS 6 to 5e, during cold MIS 5 substages (MIS 5d and b), and at the end of MIS 5 (Figure 2b). Discussion Plant life form, function, and metabolic pathway have been found to dictate the chain length distribution of leaf waxes (ACL) in terrestrial plants 32–34 . Several studies have also provided evidence that climate factors (i.e., temperature and moisture) may modulate the ACL, consistent with the role of the leaf wax layer in regulating water loss of the plant. Positive (negative) relations between growth temperature (moisture availability) and n -alkane chain length (ACL) have been reported (e.g., 35–40 ). In our GL-1090 record, we can readily argue that temperature does not exert a dominant control on leaf wax chain length because higher ACL values are observed during cold glacial climates and not during warm intervals (Figure 2a). The possible control of moisture on the ACL can be explored by considering long-term variations in rainfall patterns. In SE Brazil, rainfall is strongly controlled by the South American Summer Monsoon (SAMS) 41,42 , the intensity of which is primarily driven by precession-forced changes in insolation 24,43 . Accordingly, high austral summer insolation during late MIS6 and Termination II would strengthen SAMS activity and rainfall in SE Brazil (Figure 3b), while the opposite would occur during MIS 5e (Figure 3b and c). Further, abrupt hydroclimate change occurred in the tropics during glacial Terminations, and a strengthening of SAMS rainfall 44–46 is largely reported, also linked to a southern placement of the Intertropical Convergence Zone (ITCZ) and decreased Atlantic cross-equatorial heat transport 47,48 . Data-model assessments indicate drier austral tropics during the Last Interglacial, with an accentuated decline of summer and spring and almost unchanged autumn/winter rainfall in South America 25 . Likewise, a speleothem δ 18 O record from the Amazon region (and also under the influence of SAMS) shows a relatively weak monsoon during MIS 5e in phase with low austral summer insolation 49 . In core GL-1090, terrigenous inputs traced with soil-derived brGDGTs (Supplementary material; Supplementary Figure 1) are ultimately controlled by changes in the rainfall rate in SE Brazil. Their pattern indicates stronger runoff (intensified SAMS) during Termination II and lower rainfall (weakend SAMS) during the Last Interglacial (Fig 3d), supported by complementary multi-proxy magnetic and isotopic studies 50,51 . Terrigenous supply from runoff is thus consistent with changes in rainfall rates dictated by austral summer insolation patterns (Figure 3b). The inferred decrease in monsoonal rainfall from the end of Termination II to MIS 5e is accompanied by a decrease in ACL values in core GL-1090 (Figure 3b), suggesting that a precipitation deficit is not pressuring plant life forms. This pattern strongly suggests that rainfall changes are unlikely the leading factor behind the observed ACL variation. Having ruled out temperature and precipitation as the primary controls on ACL variations, we argue that the ACL record likely reflects vegetation changes in the adjacent hinterland. Among C 3 plants, deciduous and evergreen broadleaf trees (angiosperms) show overall lower ACL values (ca. ≤ 29-30) compared to herbaceous and conifer vegetation (ACL > 30), and C 3 savannah plants produce longer-chain n -alkanes (higher ACL) than the C 3 rainforest plants 33,52 . We thus propose that the ACL in core GL-1090 traces changes in the Atlantic Forest in SE Brazil with lower (higher) ACL indicating expansion (retraction) of the forest. A previous record in the study area has suggested using ACL as a proxy for changes in the Atlantic Forest 53 . In order to further constrain the ACL as a tracer of vegetation (Atlantic Forest) changes, we compared our results with available pollen data from the Colônia crater in SE Brazil located only a few kilometers from the shoreline 30 . The higher (~ 30.4) ACL values during late MIS 6 are consistent with the dominant presence of grassland vegetation composed of an association of Poaceae , conifers ( Araucaria and Podocarpus ), and shrubs 30 as the ones noted today at high elevation in the state of Paraná (southern Brazil) 54 . Toward the Last Interglacial, the vegetation composition fluctuated with the same species as during the penultimate glacial, except for the Poaceae, which decreased sharply, allowing shrubs to expand 55 . During MIS 5e, trees replaced shrubs, as shown in the high arboreal pollen frequencies 30 , and this trend is mirrored in the concurrent smooth decreasing of ACL (Figures 3c and e). Such a coherent variation between ACL and arboreal pollen data, already observed in other studies (e.g. 56 ), strengthens our interpretation of ACL as a proxy of Atlantic Forest variations in SE Brazil. In this sense, the Last Interglacial likely shows the largest expansion of the arboreal cover of the Atlantic Forest over the studied period. Upon the demise of the Last Interglacial and towards MIS 4, a linear increasing trend is embedded in our ACL, with values reaching close to those of MIS 6 (Figure 3c). Throughout this interval, an orbital pattern is clearly distinguished following MIS 5 substages, with MIS 5d and b (MIS 5c and a) presenting a pattern toward higher (lower) ACL. Superimposed on this orbital scale, noticeable millennial-scale ACL negative excursions through MIS 5 substages likely indicate periods of short-term Atlantic Forest expansions briefly interrupting this long-term retraction. Our data require a mechanism to account for the inferred variations of the Atlantic Forest vegetation distribution on orbital and millennial time scales. Here, we propose that these variations were primarily driven by the global atmospheric concentration of carbon dioxide, whereby elevated atmospheric CO 2 enhances forest plant growth through the “fertilization” effect (increased photosynthesis) and promotes decreased stomatal conductance that reduces transpiration (water loss) 8–10 . The role of this mechanism and its effect on biomass gains, biodiversity, and mortality rates, mainly over long-term periods, is still uncertain 57 . Modeling results with a potential vegetation model for Brazilian biomes indicated an increase in humid forest cover for future high-emission scenarios, although this tends to be counteracted by decreasing precipitation and rising temperatures 57 . Based on our record and the complementary pollen data, we argue that raising atmospheric CO 2 during the penultimate deglaciation promoted the expansion of the Atlantic Forest in SE Brazil during MIS5e (Figure 3c). Interestingly, a similar conclusion is drawn by a pollen record combined with leaf wax data from the SE African margin. According to the authors, the development of interglacial woodlands would be primarily favored by higher CO 2 levels that allow decreased stomatal conductivity, relieving drought stress 17 . Aside from orbital variation, the ACL in core GL-1090 also varies on millennial time scales, revealing rapid changes in the SE Brazil biomes. During glacial intervals, the abrupt climate oscillations between the so-called Dansgaard-Oescheger (DO) stadial and interstadial conditions (Figures 3a and f) are linked with precipitation changes in (sub)tropical South America 24 that have the potential to promote a vegetation response. However, the wetter climate during Dansgaard-Oescheger (DO) stadials, shown in the Botuvera cave δ 18 O record, does not involve lower ACL (i.e., forest expansion) (Figures 3a and c). In contrast, short-term forest expansion, denoted by lower ACL, is observed in DO interstadials (e.g., 19-21 and, to a lesser extent, 23-24 (Figures 3a and c)). The negative ACL excursions are nearly synchronous with millennial-scale CO 2 increments of ~10 – 20 ppm (Figures 3a and c), implying the role of CO 2 in driving a rapid Atlantic Forest response. Furthermore, the link between ACL (Atlantic Forest) and CO 2 is endorsed by the isospectral correlation, which yields a strong significant correlation between them (R > -0.80, p < 0.01) (Figure 3g). Further, wavelet coherency analysis between ACL and CO 2 shows a well-defined anti-phased (180 º) signal taking place at precessional variability (~ 20 ka), which means that on orbital time scales, CO 2 and arboreal Atlantic Forest are synchronous. A wide coherency region at ~ 5 – 10 ka time scales could be related to large background changes of global atmospheric CO 2 since they occur at main transition periods (i.e., Termination II and MIS 5/4 boundary) (Figure 3g). The phase-angle during Termination II could still indicate a slight leading of atmospheric CO 2 related to the Atlantic Forest, which aligns with our interpretation. Biome changes may impact the stability of the underlying soils as increasing vegetation cover (forest expansion) contributes to stabilizing and reducing soil erosion. The main peaks in soil material (brGDGT concentration) occur in periods of reduced arboreal cover (higher ACL) and enhanced precipitation (Figures 3a, c, and d), with this being conditioned by the core stratigraphy, disregarding chronological uncertainties (Figure 2). In this sense, our data highlight the dynamic response of the Atlantic rainforest and underlying soils in SE Brazil induced by global CO 2 changes. Aiming to quantify the effects of CO 2 over biomass gains, we ran potential vegetation simulations with the CPTEC-PVM2 initialized with the 1961–1990 climatology 61 , which reasonably reproduces the main South American biomes 29 (Figure 4). We evaluated the distribution of net primary productivity (kgC/m²yr) in experiments where only CO 2 is changed from penultimate glacial (180 ppm) to Last Interglacial (280 ppm) levels (Figure 4a). Simulations indicate that regions of tropical evergreen forest, which under the current climatology occur in the Amazon region and SE Brazil, suffer a loss in net primary productivity under penultimate glacial CO 2 concentration compared with the present (Figure 4b). Otherwise, when atmospheric CO 2 concentration is set to the Last Interglacial level, it favors a biomass gain of roughly 0.16 – 0.24 kgC/m²yr relative to glacial conditions (Figure 4b). Future projections of vegetation cover in a range of conditions where only CO 2 or CO 2 and climate (temperature and precipitation) are considered suggest that tropical biomes are maintained or increase their productivity if the long-term CO 2 fertilization effect plays a role 29 . This positive feedback caused by atmospheric CO 2 is only countered if the dry season is longer than four months 29 . However, no observational evidence suggests that the CO 2 fertilization effect will likely play an important role in tropical forests on longer time scales 29 . In this sense, our data will work as long-term evidence that the CO 2 fertilization effect is a pervasive mechanism operating on millennial to orbital time scales. Evidently, the role of precipitation and temperature cannot be neglected 29 . Monitoring Brazilian non-Amazon tropical forests shows that recent drying and warming trends in the southeastern region have increased the annual carbon loss, turning carbon sink areas into carbon sources 62 . Considering this view, we hypothesize that past millennial-scale decreases in precipitation or even the drier condition of the Last Interglacial for the southern tropics 25 still yielded a sufficient rainfall supply to allow the CO 2 fertilization effect to occur. In this scenario, dry seasons likely do not exceed four months, and the range of CO 2 variability is not large enough to cause saturation within enzymatic scales 29 . Our study sheds light on the role of humid forests as carbon sinks during past periods of natural warming, working likely as negative feedback to slow down global warming and capture carbon released from the deep ocean. Deforestation of remaining Atlantic Forest areas seriously threatens any future carbon-induced biomass gain, urging protection and reforestation initiatives to preserve its natural long-term capacity in carbon storage. Methods Core GL-1090 and age model Sediment core GL-1090 was collected in subtropical western South Atlantic (Santos basin - 24.92 ºS, 42.51 ºW) by Petrobras at a water depth of 2225 m. GL-1090 consists mostly of greenish to olive glacial sediments somewhat rich in foraminifera-bearing silty clay with Last Interglacial sediments represented by whitish clays 26 . The uppermost circulation in the region is dominated by the southward-flowing Brazil current that originates at ~ 10 ºS from the southern branch of the bifurcation of the South Equatorial Current 63 . Several minor rivers drain the narrow coastal plain north of the core location, with the Paraíba do Sul the most important. About 10 °S south of the GL-1090 site, the Plata River meets the subtropical Atlantic Ocean, in which the Plata Basin represents the largest source of terrigenous material to the western South Atlantic 50 . The chronology of the 1914 cm sediment length is resolved by radiocarbon dating and benthic foraminifera δ 18 O tuning with sediment core MD95-2042. The age model employed was modified after refs. 27,64 with a new tie-point collection during Termination II and throughout MIS 5. Final interpolation occurred on Bacon 2.3, which creates a more realistic Bayesian sediment accumulation history 65 . Average chain length of n -alkanes and brGDGT The n -alkanes and brGDGTs were analyzed between 150.51 - 64.86 ka (689 – 1591 cm) along core GL-1090. Lipids were solvent extracted from freeze-dried sediments with sonication and separated into three fractions by silica gel chromatography following the procedures described in ref. 66 . n -alkanes were analyzed on an Agilent 6890N gas chromatography coupled to a flame ionization detector (GC-FID) and equipped with a 30 m DB-5 capillary column (0.32 mm internal diameter, 0.25 µm film thickness). The detector was set at 330 °C. The oven temperature program was initiated at 50 °C, increased by a rate of 30 °C min -1 to 120 °C, and subsequently by a rate of 5 °C min -1 until 320 °C (held for 10 min). Helium was used as carrier gas at constant flow (2.0 mL min -1 ). The individual n-alkanes were quantified by comparing their peak area with the area of an internal standard. The average chain length (ACL; ref. 67 ) was calculated using the most abundant C 27 to C 33 odd-carbon numbered n-alkanes; ACL= S (i*X i )/ S X i , where X is abundance, and i ranges from 27 to 33. GDGTs (Glycerol dialkyl glycerol tetraethers) were analyzed by high-pressure liquid chromatography coupled with mass spectrometry with an atmospheric pressure chemical ionization source (HPLC–APCI-MS) using a Shimadzu LCMS 2020 in selected ion monitoring mode, equipped with two Acquity UHPLC BEH HILIC columns in tandem (150 mm × 2.1 mm, 1.7 μm; Waters, USA), thermally controlled at 40 ◦C; following the procedure detailed in ref. 68 . Potential Vegetation Model We used the Center for Weather Forecasting and Climate Studies Potential Vegetation Model version 2 (CPTEC-PVM2). This model is skillful in reproducing the main South American biomes like tropical forests over Amazonia and the Atlantic coastal region, savannas over central Brazil (‘cerrado’), dry shrublands (‘caatinga’) over northeastern Brazil and the Chaco region, grasslands over the Pampas, and semidesert vegetation over Patagonia 57 , 29 . CPTEC-PVM2 shows a reasonable performance over South America due to considering seasonality as a factor delimitating savannas and forests. CPTEC-PVM2 takes into account plant physiological responses to this seasonality. The biome allocation rules rely mainly on a given grid cell's optimum net primary productivity values, which demands gross primary productivity and plant respiration calculation. This is done aside with a water balance submodel using 1961 – 1990 surface temperature and precipitation climatologies from http://climate.geog.udel.edu/~climate/html_pages/download.html. Global and especially South American net primary productivity simulated by CPTEC-PVM2 is comparable to that from observations and other models 29 . In this study, we run a “CO 2 -only” experiment with atmospheric carbon dioxide concentrations relative to the penultimate glacial maximum (180 ppm) and Last Interglacial (280 ppm) in which the climate (precipitation and temperature) are kept unchanged as taken from 1961 – 1990 average. Correlation analysis Correlation exercises were done in the Python 3.9 application Pyleoclim 69 . Merged atmospheric CO 2 from refs. 22,23 and GL-1090 ACL were previously interpolated to their mean resolution and standardized with respective Pyleoclim tools. We used time-series correlation with the default isospectral method accompanied by 5,000 Monte Carlo runs. Wavelet coherence analysis was realized over the same data pair with 1,000 Monte Carlo runs. Declarations Acknowledgments We acknowledge Petrobras by the cession of sediment core GL-1090. This work was supported by the BARISTA project funded through the French National program LEFE, and by the CAPES/Paleoceano Project (23038.001417/2014e7), CAPES-IODP/Aspecto Project (88887.091731/2014e01), Project CLIMATE/Print-CAPES (88887.310301/2018e00). We acknowledge the support of the CAPES-COFECUB program through their funding of actions 32/2022 and Te 1003/23 (project numbers 8881.712022/2022-1 and 49558SM) and by the CNRS-France International Research Project SARAVA (Drivers of past changes in South Atlantic circulation and tropical South American climate). TPS also thanks the Programa de Apoio a Novos Docentes (process 22.1.09345.01.2) of the University of São Paulo. JFC thanks the support provided by CNPq (140443/2016e9) and CAPES/Programas Estrategicos (88881.145911/2017e01). RAN thanks the French Ministry of Europe and Foreign Affairs for its financial support within the MOPGA Fellowship Program. IMV acknowledges the support of FAPERJ (SEI-260003/000677/2023) (JCNE grant 200.120/2023–281226) Author contribution TPS: Writing - Original Draft, Conceptualization, Formal analysis, Data Curation. IB: Writing - Original Draft, Writing - Review & Editing, Resources, Supervision, Funding acquisition. JFC: Formal analysis, Investigation. AMSR: Formal analysis, Investigation. MPL: Writing - Review & Editing, Data Curation. AH: Writing - Review & Editing, Resources, Supervision, Funding acquisition. MHS: Formal analysis. MRL: Formal analysis. RAN: Writing - Review & Editing. IMV: Writing - Review & Editing. RLS: Writing - Review & Editing, Formal analysis. MCB: Writing - Review & Editing, Formal analysis, Supervision. ALSA: Supervision, Project administration, Funding acquisition. Data availability statement Data generated for this study accompanies the submission as supplementary material. 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Maia, V. A. et al. The carbon sink of tropical seasonal forests in southeastern Brazil can be under threat. Sci. Adv. 6 , eabd4548 (2020). Stramma, L. & England, M. On the water masses and mean circulation of the South Atlantic Ocean. Journal of Geophysical Research: Oceans 104 , 20863–20883 (1999). Ballalai, J. M. et al. Tracking Spread of the Agulhas Leakage Into the Western South Atlantic and Its Northward Transmission During the Last Interglacial. Paleoceanography and Paleoclimatology 34 , 1744–1760 (2019). Blaauw, M., Christen, J. A., Bennett, K. D. & Reimer, P. J. Double the dates and go for Bayes — Impacts of model choice, dating density and quality on chronologies. Quaternary Science Reviews 188 , 58–66 (2018). Cruz, J. F. et al. Multiproxy reconstruction of late quaternary upper ocean temperature in the subtropical southwestern Atlantic. Quaternary Science Reviews 307 , 108044 (2023). Proceedings of the Ocean Drilling Program, 116 Scientific Results . vol. 116 (Ocean Drilling Program, 1990). Rouyer-Denimal, L. et al. Subsurface warming in the tropical Atlantic for the last 3 deglaciations: Insights from organic molecular proxies. Quaternary Science Reviews 321 , 108370 (2023). Khider, D. et al. Pyleoclim: Paleoclimate Timeseries Analysis and Visualization With Python. Paleoceanog and Paleoclimatol 37 , (2022). Additional Declarations There is NO Competing Interest. Supplementary Files GL1090data.csv GL-1090 data Supplementarymaterial.docx Supplementaryfigure1.tif Cite Share Download PDF Status: Under Review Version 1 posted You are reading this latest preprint version Research Square lets you share your work early, gain feedback from the community, and start making changes to your manuscript prior to peer review in a journal. As a division of Research Square Company, we’re committed to making research communication faster, fairer, and more useful. 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Also discoverable on Platform About Our Team In Review Editorial Policies Advisory Board Help Center Resources Author Services Accessibility API Access RSS feed Manage Cookie Preferences © Research Square 2026 | ISSN 2693-5015 (online) Privacy Policy Terms of Service Do Not Sell My Personal Information {"props":{"pageProps":{"initialData":{"identity":"rs-4294907","acceptedTermsAndConditions":true,"allowDirectSubmit":false,"archivedVersions":[],"articleType":"Article","associatedPublications":[],"authors":[{"id":294245656,"identity":"51be78eb-f82e-4437-80c3-002e6b920bbc","order_by":0,"name":"Thiago Santos","email":"data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAZAAAAAyAQMAAABI0h/eAAAABlBMVEX///8AAABVwtN+AAAACXBIWXMAAA7EAAAOxAGVKw4bAAAAwElEQVRIiWNgGAWjYDACCcYGEMXYwA6mDxDWwQPXwnOAaC0QmrFBIoFILfbSzY0fv1TckZ0/843x5wKGO/mEbZE52Cwtc+aZ8YbbOWbSMxieWTYQdlhig7Rk2+HEDdI5Zsw8DIcNCNsikdj8G6Rl/swzxp+J1dIm+RGopeEGj4E0cVpuJLZZM4D8ciatTHqGwTPCWthnpD+++QMUYu2HN38uqLhDWAsIAH19AMJgIE4DMBp/wLWMglEwCkbBKMACALNAQge//Pw2AAAAAElFTkSuQmCC","orcid":"https://orcid.org/0000-0002-9273-3329","institution":"University of São Paulo","correspondingAuthor":true,"prefix":"","firstName":"Thiago","middleName":"","lastName":"Santos","suffix":""},{"id":294245657,"identity":"cbbee4f5-542a-40a2-89e0-8fce5793220c","order_by":1,"name":"Ioanna Bouloubassi","email":"","orcid":"","institution":"Sorbonne Université","correspondingAuthor":false,"prefix":"","firstName":"Ioanna","middleName":"","lastName":"Bouloubassi","suffix":""},{"id":294245658,"identity":"980094f4-7116-4704-b47e-ba2cd047696a","order_by":2,"name":"Joana 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University","correspondingAuthor":false,"prefix":"","firstName":"Marcelo","middleName":"","lastName":"Bernardes","suffix":""},{"id":294245668,"identity":"d32588d2-84a6-4f50-9078-0f82b756e849","order_by":12,"name":"Ana Albuquerque","email":"","orcid":"https://orcid.org/0000-0003-1267-6190","institution":"Universidade Federal Fluminense","correspondingAuthor":false,"prefix":"","firstName":"Ana","middleName":"","lastName":"Albuquerque","suffix":""}],"badges":[],"createdAt":"2024-04-19 20:00:25","currentVersionCode":1,"declarations":"","doi":"10.21203/rs.3.rs-4294907/v1","doiUrl":"https://doi.org/10.21203/rs.3.rs-4294907/v1","draftVersion":[],"editorialEvents":[],"editorialNote":"","failedWorkflow":false,"files":[{"id":56176448,"identity":"e15ebe4d-29c2-43e4-a540-31cb30ce1b6a","added_by":"auto","created_at":"2024-05-09 13:08:07","extension":"png","order_by":1,"title":"Figure 1","display":"","copyAsset":false,"role":"figure","size":2457050,"visible":true,"origin":"","legend":"\u003cp\u003ePosition of sediment core GL-1090 (yellow star – this study) in the western South Atlantic (Santos basin) and other continental records discussed (red circles - Colônia crater\u003csup\u003e30\u003c/sup\u003e and Botuverá cave\u003csup\u003e24\u003c/sup\u003e). The pink highlighted area presents the original cover of the Atlantic Forest in eastern South America. This figure has been partially done with PyGMT\u003csup\u003e31\u003c/sup\u003e.\u003c/p\u003e","description":"","filename":"Figure1.png","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/9743a5bd190932d9af8049d6.png"},{"id":56176476,"identity":"47e31aee-905c-4d14-abeb-6435e02bf7f0","added_by":"auto","created_at":"2024-05-09 13:08:14","extension":"png","order_by":2,"title":"Figure 2","display":"","copyAsset":false,"role":"figure","size":537127,"visible":true,"origin":"","legend":"\u003cp\u003eResults of core GL-1090 average chain length (ACL) of n-alkanes and branched glycerol dialkyl glycerol tetraethers (brGDGTs) concentrations from Marine Isotope Stage (MIS) 6 to 4. (a) GL-1090 ACL (thin black line and dots) with 3-points moving average (thick black line). (b) GL-1090 brGDGT (brown line and dots) with 3-point moving average (thick brown line). Vertical yellow bars denote the Last Interglacial and warm MIS 5 substages.\u003c/p\u003e","description":"","filename":"Figure2.png","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/391caa818b7773ef8d5ad3d3.png"},{"id":56176480,"identity":"3cd31a2c-8d6d-43d1-a668-473c4db7a5bc","added_by":"auto","created_at":"2024-05-09 13:08:19","extension":"png","order_by":3,"title":"Figure 3","display":"","copyAsset":false,"role":"figure","size":3009166,"visible":true,"origin":"","legend":"\u003cp\u003eResults of core GL-1090 average chain length (ACL) and branched glycerol dialkyl glycerol tetraether (brGDGT) concentrations in the context of Marine Isotope Stage (MIS) 6 to 4. (a) NGRIP δ\u003csup\u003e18\u003c/sup\u003eO at the AICC2012 time scale\u003csup\u003e58,59\u003c/sup\u003e (black) and high band-pass filtering of the Boutuverá cave δ\u003csup\u003e18\u003c/sup\u003eO\u003csup\u003e24\u003c/sup\u003e (blue). (b) austral summer insolation between 20 – 30 ºS\u003csup\u003e60\u003c/sup\u003e. (c) GL-1090 ACL (thin black line and dots) with 3-point moving average (thick black line) and atmospheric CO\u003csub\u003e2 \u003c/sub\u003efrom Antarctica ice cores from refs.\u003csup\u003e23\u003c/sup\u003e (orange) and ref. \u003csup\u003e22\u003c/sup\u003e (red). (d) GL-1090 brGDGT (brown, black line and dots) with 3-point moving average (thick brown line). (e) Colônia crater arboreal pollen data from ref.\u003csup\u003e30\u003c/sup\u003e. (f) EDML δ\u003csup\u003e18\u003c/sup\u003eO at the AICC2012 time scale\u003csup\u003e58,59\u003c/sup\u003e. (g) GL-1090 ACL and atmospheric CO\u003csub\u003e2\u003c/sub\u003e with the isospectral correlation and wavelet transform coherency.\u003c/p\u003e","description":"","filename":"Figure3.png","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/fba05922f8038d8f61f70154.png"},{"id":56176478,"identity":"fa08923b-1a4c-4969-bc99-90c403890006","added_by":"auto","created_at":"2024-05-09 13:08:15","extension":"png","order_by":4,"title":"Figure 4","display":"","copyAsset":false,"role":"figure","size":4694196,"visible":true,"origin":"","legend":"\u003cp\u003e“CO\u003csub\u003e2\u003c/sub\u003e-only” experiment conducted with Center for Weather Forecasting and Climate Studies Potential Vegetation Model version 2 (CPTEC-PVM2) in which precipitation and temperature are kept unchanged referent to 1961 – 1990 mean climatology. (a) Net primary productivity under the Last Interglacial (left) and penultimate glacial maximum (right) CO\u003csub\u003e2\u003c/sub\u003e concentrations. (b) Net primary productivity difference between Last Interglacial and penultimate glacial (left) and penultimate glacial and mean 1961 – 1990 CO\u003csub\u003e2\u003c/sub\u003e concentration (right).\u003c/p\u003e","description":"","filename":"Figure4.png","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/46ee1f800825a8da8fd356a1.png"},{"id":56176831,"identity":"1b651485-a4da-4af9-bed6-2823e38f67b8","added_by":"auto","created_at":"2024-05-09 13:16:37","extension":"pdf","order_by":0,"title":"","display":"","copyAsset":false,"role":"manuscript-pdf","size":15859220,"visible":true,"origin":"","legend":"","description":"","filename":"manuscript.pdf","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/86705dda-81a9-43a2-9df4-2832d9c7128a.pdf"},{"id":56176817,"identity":"e7c4ab50-1126-44c1-803a-7e49e7c8229b","added_by":"auto","created_at":"2024-05-09 13:16:06","extension":"csv","order_by":1,"title":"","display":"","copyAsset":false,"role":"supplement","size":10399,"visible":true,"origin":"","legend":"GL-1090 data","description":"","filename":"GL1090data.csv","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/e821839d0c9efa727c2dc777.csv"},{"id":56176822,"identity":"f33226df-72c2-450b-a3fd-00c6671e0a67","added_by":"auto","created_at":"2024-05-09 13:16:16","extension":"docx","order_by":2,"title":"","display":"","copyAsset":false,"role":"supplement","size":17180,"visible":true,"origin":"","legend":"\u003cp\u003e\u003cbr\u003e\u003c/p\u003e","description":"","filename":"Supplementarymaterial.docx","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/3228089f5cd88010345ae394.docx"},{"id":56176485,"identity":"1bfde747-6274-4e1e-b247-d93700334f28","added_by":"auto","created_at":"2024-05-09 13:08:27","extension":"tif","order_by":3,"title":"","display":"","copyAsset":false,"role":"supplement","size":417434,"visible":true,"origin":"","legend":"","description":"","filename":"Supplementaryfigure1.tif","url":"https://assets-eu.researchsquare.com/files/rs-4294907/v1/17fa6148afceca59adbbb2a4.tif"}],"financialInterests":"There is \u003cb\u003eNO\u003c/b\u003e Competing Interest.","formattedTitle":"Long-term adjustment of the South America Atlantic Forest to atmospheric carbon dioxide concentration","fulltext":[{"header":"Introduction","content":"\u003cp\u003e\u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp;\u0026nbsp;The Neotropical Atlantic Forest is one of the world\u0026rsquo;s most biodiverse and endangered ecosystems\u003csup\u003e1,2\u003c/sup\u003e that originally covered 12 % of Brazil\u0026rsquo;s national territory with a latitudinal range of \u003cem\u003eca.\u003c/em\u003e 29\u0026deg; extending into tropical and subtropical regions (Figure 1). The massive agricultural expansion with the arrival of European colonists in the 16\u003csup\u003eth\u003c/sup\u003e century, followed by intense industrialization and urban development, has resulted in an impressive habitat loss. Currently, the Atlantic Forest is confined to only \u003cem\u003eca\u003c/em\u003e. 7 % of its original extent\u003csup\u003e3\u003c/sup\u003e and composed of small, isolated, and degraded fragments, making this ecosystem a global priority for biodiversity conservation\u003csup\u003e2\u0026ndash;4\u003c/sup\u003e.\u003c/p\u003e\n\u003cp\u003e\u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp;\u0026nbsp;Tropical forests, like the Atlantic Forest, are characterized by the dominance of tree life forms, creating a closed canopy and complex arrangements that provide diverse ecosystem services\u003csup\u003e5\u003c/sup\u003e. Among these, carbon uptake is the most recognized, with about one-third of anthropogenic carbon dioxide emitted being removed by such forests\u003csup\u003e6\u003c/sup\u003e. Carbon uptake in terrestrial ecosystems seems to have increased globally\u003csup\u003e7\u003c/sup\u003e, likely due to the fertilization effect of rising CO\u003csub\u003e2\u0026nbsp;\u003c/sub\u003elevels. Indeed, one of the primary expected effects of higher atmospheric CO\u003csub\u003e2\u003c/sub\u003e is an increase in the photosynthetic rate and a decrease in the transpiration rate occurring at the enzymatic and stomatal scales, which ultimately regulates C uptake\u003csup\u003e8\u0026ndash;10\u003c/sup\u003e. This effect may result in important negative feedback on anthropogenic-induced global warming\u003csup\u003e11\u003c/sup\u003e\u003csup\u003e,\u003c/sup\u003e\u003csup\u003e12\u003c/sup\u003e. Otherwise, studies argue that this capacity is not being sustained because increasing air temperature and reduced water availability would raise plant respiration exponentially, reducing forest productivity\u003csup\u003e13,14\u003c/sup\u003e. Such conflicting conclusions emphasize our poor understanding of the long-term response of tropical forests to rising CO\u003csub\u003e2\u003c/sub\u003e levels.\u003c/p\u003e\n\u003cp\u003eIn this regard, paleoclimate data may provide relevant insight for investigating past vegetation changes under naturally varying atmospheric CO\u003csub\u003e2\u0026nbsp;\u003c/sub\u003econcentrations\u003csub\u003e\u0026nbsp;\u003c/sub\u003eat different time scales. Leaf gas-exchange modeling on temperate and tropical fossil flora from the early Miocene suggests enhanced leaf-level productivity and water-use efficiency under elevated CO\u003csub\u003e2\u003c/sub\u003e (~ 450-550 ppm), which likely contributed to forest survival in climates where currently tropical savannas and grasslands dominate\u003csup\u003e15\u003c/sup\u003e. In the Quaternary, the triple isotopic ratio of atmospheric oxygen recovered from Antarctica ice cores indicates that marine and terrestrial biosphere productivity changes coeval to glacial-interglacial variability, with the latter largely driven by atmospheric CO\u003csub\u003e2\u003c/sub\u003e\u003csup\u003e16\u003c/sup\u003e. In subtropical SE Africa, the main extension of woodlands during the Pleistocene occurred under interglacial conditions of raised CO\u003csub\u003e2\u0026nbsp;\u003c/sub\u003eeven though these intervals were regionally drier than glacial periods\u003csup\u003e17\u003c/sup\u003e. Likewise, the Pleistocene evolution of NW African savanna ecosystems was strongly controlled by atmospheric \u003cem\u003ep\u003c/em\u003eCO2, whereby rising atmospheric carbon dioxide\u0026nbsp;led to increased woody cover\u003csup\u003e18\u003c/sup\u003e. Tropical forests in South America experienced a marked expansion since the Last Glacial Maximum (LGM), leading to a 20%-100% increase in carbon storage\u003csup\u003e19\u003c/sup\u003e.\u0026nbsp;For the Atlantic forest realm, the increase in carbon storage was estimated in the order of 4.9 10\u003csup\u003e9\u003c/sup\u003e tC (55%), making this biome an important locus for atmospheric CO\u003csub\u003e2\u003c/sub\u003e sequestration\u003csup\u003e19\u003c/sup\u003e. Changes in past vegetation cover/dynamics of the Atlantic forest have usually been ascribed to climate (i.e., temperature and moisture), while the (possible) control of atmospheric CO\u003csub\u003e2\u003c/sub\u003e has not been strongly explored\u003csup\u003e20,21\u003c/sup\u003e.\u003c/p\u003e\n\u003cp\u003e\u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp;\u0026nbsp;Here, we investigate an 85 kyr time interval from late Marine Isotope Stage (MIS) 6 to early MIS 4, which spans over glacial, transitional, and interglacial climate phases, encompassing a large range of CO\u003csub\u003e2\u003c/sub\u003e conditions (from \u0026nbsp; ~ 200 to \u0026nbsp;~280 ppm)\u003csup\u003e22,23\u003c/sup\u003e and includes periods of different monsoonal rainfall regimes in the South America\u003csup\u003e24,25\u003c/sup\u003e. We provide a record of vegetation changes from plant wax composition and soil-derived discharges based on the abundance of branched glycerol dialkyl glycerol tetraether in a marine sediment core from the continental slope of SE Brazil \u0026nbsp; (GL-1090, 24.92 \u0026ordm;S, 42.51 \u0026ordm;W, 2225 m water depth)\u003csup\u003e26,27\u003c/sup\u003e. The core site receives terrestrial inputs through runoff from the adjacent hinterland that hosts the central and south areas of the South American Atlantic Forest\u003csup\u003e28\u003c/sup\u003e. We discuss our records with regional pollen data, monsoonal precipitation, and global CO\u003csub\u003e2\u003c/sub\u003e concentrations.\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eOur findings sustain that under natural climate variability, the atmospheric CO\u003csub\u003e2\u003c/sub\u003e concentration is the key driver of the Atlantic Forest changes (arboreal cover) on precessional and millennial time scales. A potential vegetation simulation with the CPTEC-PVM2 model\u003csup\u003e29\u003c/sup\u003e corroborates this interpretation. Our data support the effect of CO\u003csub\u003e2\u003c/sub\u003e fertilization over the Atlantic Forest and urge protection and reforestation initiatives to preserve its natural long-term capacity in carbon storage.\u003c/p\u003e"},{"header":"Results","content":"\u003cp\u003e\u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp; \u0026nbsp;\u0026nbsp;A suite of long chain odd-carbon numbered homologs dominates the distribution of \u003cem\u003en\u003c/em\u003e-alkanes and is typical of inputs from epicuticular waxes of terrestrial higher plants\u003csup\u003e32\u003c/sup\u003e. Their Average Chain Length (ACL) varies between 29.6 and 30.7 and exhibits glacial-interglacial oscillations (Figure 2a), with generally higher values during full glacial or cold MIS 5 substages (MIS 5d and 5b). The largest ACL change (~ 0.7) occurs at the transition from the penultimate glacial maximum (late MIS 6) to the Last Interglacial (MIS 5e), where relatively steady low ACL values (~ 29.7) dominate the pattern. From early MIS 5e toward MIS 4, a Mann-Kendall statistically significant increasing trend exists (p \u0026lt; 0.01), leading the ACL from its low Last Interglacial to higher full glacial values (~ 30.4). The long-term increasing ACL trend is overprinted by rapid, millennial-scale, negative excursions (~ 0.3 \u0026ndash; 0.4), mainly during the warm MIS 5c and 5a substages.\u003c/p\u003e\n\u003cp\u003eBranched glycerol dialkyl glycerol tetraethers (brGDGTs) concentrations vary between 0 and 250ng/g of dry sediment. Their variations in core GL-1090 follow the ACL pattern (Figure 2a), whereby lower concentrations are generally followed by reduced ACL, with the lowest values observed during MIS 5e. Rapid millennial-scale spikes lead brGDGT from its lower baseline to peaks of ~ 150 \u0026ndash; 200 ng/g, mainly at the transition from late MIS 6 to 5e, during cold MIS 5 substages (MIS 5d and b), and at the end of MIS 5 (Figure 2b).\u003c/p\u003e"},{"header":"Discussion","content":"\u003cp\u003ePlant life form, function, and metabolic pathway have been found to dictate the chain length distribution of leaf waxes (ACL) in terrestrial plants\u003csup\u003e32\u0026ndash;34\u003c/sup\u003e. Several studies have also provided evidence that climate factors (i.e., temperature and moisture) may modulate the ACL, consistent with the role of the leaf wax layer in regulating water loss of the plant. Positive (negative) relations between growth temperature (moisture availability) and \u003cem\u003en\u003c/em\u003e-alkane chain length (ACL) have been reported (e.g.,\u003csup\u003e35\u0026ndash;40\u003c/sup\u003e). In our GL-1090 record, we can readily argue that temperature does not exert a dominant control on leaf wax chain length because higher ACL values are observed during cold glacial climates and not during warm intervals (Figure 2a).\u003c/p\u003e\n\u003cp\u003eThe possible control of moisture on the ACL can be explored by considering long-term variations in rainfall patterns. In SE Brazil, rainfall is strongly controlled by the South American Summer Monsoon (SAMS)\u003csup\u003e41,42\u003c/sup\u003e, the intensity of which is primarily driven by precession-forced changes in insolation\u003csup\u003e24,43\u003c/sup\u003e. Accordingly, high austral summer insolation during late MIS6 and Termination II would strengthen SAMS activity and rainfall in SE Brazil (Figure 3b), while the opposite would occur during MIS 5e (Figure 3b and c). Further, abrupt hydroclimate change occurred in the tropics during glacial Terminations, and a strengthening of SAMS rainfall\u003csup\u003e44\u0026ndash;46\u003c/sup\u003e is largely reported, also linked to a southern placement of the Intertropical Convergence Zone (ITCZ) and decreased Atlantic cross-equatorial heat transport\u003csup\u003e47,48\u003c/sup\u003e. Data-model assessments indicate drier austral tropics during the Last Interglacial, with an accentuated decline of summer and spring and almost unchanged autumn/winter rainfall in South America\u003csup\u003e25\u003c/sup\u003e. Likewise, a speleothem \u0026delta;\u003csup\u003e18\u003c/sup\u003eO record from the Amazon region (and also under the influence of SAMS) shows a relatively weak monsoon during MIS 5e in phase with low austral summer insolation\u003csup\u003e49\u003c/sup\u003e.\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eIn core GL-1090, terrigenous inputs traced with soil-derived brGDGTs (Supplementary material; Supplementary Figure 1) are ultimately controlled by changes in the rainfall rate in SE Brazil. \u0026nbsp; Their pattern indicates stronger runoff (intensified SAMS) during Termination II and lower rainfall (weakend SAMS) during the Last Interglacial (Fig 3d), supported by complementary multi-proxy magnetic and isotopic studies\u003csup\u003e50,51\u003c/sup\u003e. Terrigenous supply from runoff is thus consistent with changes in rainfall rates dictated by austral summer insolation patterns (Figure 3b). The inferred decrease in monsoonal rainfall from the end of Termination II to MIS 5e is accompanied by a decrease in ACL values in core GL-1090 (Figure 3b), suggesting that a precipitation deficit is not pressuring plant life forms. This pattern strongly suggests that rainfall changes are unlikely the leading factor behind the observed ACL variation.\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eHaving ruled out temperature and precipitation as the primary controls on ACL variations, we argue that the ACL record likely reflects vegetation changes in the adjacent hinterland. Among C\u003csub\u003e3\u003c/sub\u003e plants, deciduous and evergreen broadleaf trees (angiosperms) show overall lower ACL values (ca.\u0026nbsp;\u0026le;\u0026nbsp;29-30) compared to herbaceous and conifer vegetation (ACL \u0026gt; 30), and C\u003csub\u003e3\u003c/sub\u003e savannah plants produce longer-chain \u003cem\u003en\u003c/em\u003e-alkanes (higher ACL) than the C\u003csub\u003e3\u003c/sub\u003e rainforest plants\u003csup\u003e33,52\u003c/sup\u003e. We thus propose that the ACL in core GL-1090 traces changes in the Atlantic Forest in SE Brazil with lower (higher) ACL indicating expansion (retraction) of the forest. A previous record in the study area has suggested using ACL as a proxy for changes in the Atlantic Forest\u003csup\u003e53\u003c/sup\u003e. In order to further constrain the ACL as a tracer of vegetation (Atlantic Forest) changes, we compared our results with available pollen data from the Col\u0026ocirc;nia crater in SE Brazil located only a few kilometers from the shoreline\u003csup\u003e30\u003c/sup\u003e. The higher (~ 30.4) ACL values during late MIS 6 are consistent with the dominant presence of grassland vegetation composed of an association of \u003cem\u003ePoaceae\u003c/em\u003e, conifers (\u003cem\u003eAraucaria\u0026nbsp;\u003c/em\u003eand \u003cem\u003ePodocarpus\u003c/em\u003e), and shrubs\u003csup\u003e30\u003c/sup\u003e as the ones noted today at high elevation in the state of Paran\u0026aacute; (southern Brazil)\u003csup\u003e54\u003c/sup\u003e. Toward the Last Interglacial, the vegetation composition fluctuated with the same species as during the penultimate glacial, except for the \u003cem\u003ePoaceae,\u003c/em\u003e which decreased sharply, allowing shrubs to expand\u003csup\u003e55\u003c/sup\u003e. During MIS 5e, trees replaced shrubs, as shown in the high arboreal pollen frequencies\u003csup\u003e30\u003c/sup\u003e, and this trend is mirrored in the concurrent smooth decreasing of ACL (Figures 3c and e).\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eSuch a coherent variation between ACL and arboreal pollen data, already observed in other studies (e.g.\u003csup\u003e56\u003c/sup\u003e), strengthens our interpretation of ACL as a proxy of Atlantic Forest variations in SE Brazil. \u0026nbsp;In this sense, the Last Interglacial likely shows the largest expansion of the arboreal cover of the Atlantic Forest over the studied period. Upon the demise of the Last Interglacial and towards MIS 4, a linear increasing trend is embedded in our ACL, with values reaching close to those of MIS 6 (Figure 3c). Throughout this interval, an orbital pattern is clearly distinguished following MIS 5 substages, with MIS 5d and b (MIS 5c and a) presenting a pattern toward higher (lower) ACL. Superimposed on this orbital scale, noticeable millennial-scale ACL negative excursions through MIS 5 substages likely indicate periods of short-term Atlantic Forest expansions briefly interrupting this long-term retraction.\u003c/p\u003e\n\u003cp\u003eOur data require a mechanism to account for the inferred variations of the Atlantic Forest vegetation distribution on orbital and millennial time scales. Here, we propose that these variations were primarily driven by the global atmospheric concentration of carbon dioxide, whereby elevated atmospheric CO\u003csub\u003e2\u003c/sub\u003e enhances forest plant growth through the \u0026ldquo;fertilization\u0026rdquo; effect (increased photosynthesis) and promotes decreased stomatal conductance that reduces transpiration (water loss)\u003csup\u003e8\u0026ndash;10\u003c/sup\u003e. The role of this mechanism and its effect on biomass gains, biodiversity, and mortality rates, mainly over long-term periods, is still uncertain\u003csup\u003e57\u003c/sup\u003e. Modeling results with a potential vegetation model for Brazilian biomes indicated an increase in humid forest cover for future high-emission scenarios, although this tends to be counteracted by decreasing precipitation and rising temperatures\u003csup\u003e57\u003c/sup\u003e. Based on our record and the complementary pollen data, we argue that raising atmospheric CO\u003csub\u003e2\u003c/sub\u003e during the penultimate deglaciation promoted the expansion of the Atlantic Forest in SE Brazil during MIS5e (Figure 3c). Interestingly, a similar conclusion is drawn by a pollen record combined with leaf wax data from the SE African margin. According to the authors, the development of interglacial woodlands would be primarily favored by higher CO\u003csub\u003e2\u003c/sub\u003e levels that allow decreased stomatal conductivity, relieving drought stress\u003csup\u003e17\u003c/sup\u003e.\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eAside from orbital variation, the ACL in core GL-1090 also varies on millennial time scales, revealing rapid changes in the SE Brazil biomes. During glacial intervals, the abrupt climate oscillations between the so-called Dansgaard-Oescheger (DO) stadial and interstadial conditions (Figures 3a and f) are linked with precipitation changes in (sub)tropical South America\u003csup\u003e24\u003c/sup\u003e that have the potential to promote a vegetation response. However, the wetter climate during Dansgaard-Oescheger (DO) stadials, shown in the Botuvera cave \u0026delta;\u003csup\u003e18\u003c/sup\u003eO record, does not involve lower ACL (i.e., forest expansion) (Figures 3a and c). In contrast, short-term forest expansion, denoted by lower ACL, is observed in DO interstadials (e.g., 19-21 and, to a lesser extent, 23-24 (Figures 3a and c)). The negative ACL excursions are nearly synchronous with millennial-scale CO\u003csub\u003e2\u003c/sub\u003e increments of ~10 \u0026ndash; 20 ppm (Figures 3a and c), implying the role of CO\u003csub\u003e2\u003c/sub\u003e in driving a rapid Atlantic Forest response. Furthermore, the link between ACL (Atlantic Forest) and CO\u003csub\u003e2\u003c/sub\u003e is endorsed by the isospectral correlation, which yields a strong significant correlation between them (R \u0026gt; -0.80, \u003cem\u003ep\u003c/em\u003e \u0026lt; 0.01) (Figure 3g).\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eFurther, wavelet coherency analysis between ACL and CO\u003csub\u003e2\u003c/sub\u003e shows a well-defined anti-phased (180 \u0026ordm;) signal taking place at precessional variability (~ 20 ka), which means that on orbital time scales, CO\u003csub\u003e2\u003c/sub\u003e and arboreal Atlantic Forest are synchronous. A wide coherency region at ~ 5 \u0026ndash; 10 ka time scales could be related to large background changes of global atmospheric CO\u003csub\u003e2\u003c/sub\u003e since they occur at main transition periods (i.e., Termination II and MIS 5/4 boundary) (Figure 3g). The phase-angle during Termination II could still indicate a slight leading of atmospheric CO\u003csub\u003e2\u003c/sub\u003e related to the Atlantic Forest, which aligns with our interpretation.\u003c/p\u003e\n\u003cp\u003eBiome changes may impact the stability of the underlying soils as increasing vegetation cover (forest expansion) contributes to stabilizing and reducing soil erosion. The main peaks in soil material (brGDGT concentration) occur in periods of reduced arboreal cover (higher ACL) and enhanced precipitation (Figures 3a, c, and d), with this being conditioned by the core stratigraphy, disregarding chronological uncertainties (Figure 2). In this sense, our data highlight the dynamic response of the Atlantic rainforest and underlying soils in SE Brazil induced by global CO\u003csub\u003e2\u003c/sub\u003e changes.\u003c/p\u003e\n\u003cp\u003eAiming to quantify the effects of CO\u003csub\u003e2\u003c/sub\u003e over biomass gains, we ran potential vegetation simulations with the CPTEC-PVM2 initialized with the 1961\u0026ndash;1990 climatology\u003csup\u003e61\u003c/sup\u003e, which reasonably reproduces the main South American biomes\u003csup\u003e29\u003c/sup\u003e (Figure 4). We evaluated the distribution of net primary productivity (kgC/m\u0026sup2;yr) in experiments where only CO\u003csub\u003e2\u003c/sub\u003e is changed from penultimate glacial (180 ppm) to Last Interglacial (280 ppm) levels (Figure 4a). Simulations indicate that regions of tropical evergreen forest, which under the current climatology occur in the Amazon region and SE Brazil, suffer a loss in net primary productivity under penultimate glacial CO\u003csub\u003e2\u003c/sub\u003e concentration compared with the present (Figure 4b). Otherwise, when atmospheric CO\u003csub\u003e2\u003c/sub\u003e concentration is set to the Last Interglacial level, \u0026nbsp;it favors a biomass gain of roughly 0.16 \u0026ndash; 0.24 kgC/m\u0026sup2;yr relative to glacial conditions (Figure 4b).\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eFuture projections of vegetation cover in a range of conditions where only CO\u003csub\u003e2\u003c/sub\u003e or CO\u003csub\u003e2\u003c/sub\u003e and climate (temperature and precipitation) are considered suggest that tropical biomes are maintained or increase their productivity if the long-term CO\u003csub\u003e2\u003c/sub\u003e fertilization effect plays a role\u003csup\u003e29\u003c/sup\u003e. This positive feedback caused by atmospheric CO\u003csub\u003e2\u003c/sub\u003e is only countered if the dry season is longer than four months\u003csup\u003e29\u003c/sup\u003e. However, no observational evidence suggests that the CO\u003csub\u003e2\u003c/sub\u003e fertilization effect will likely play an important role in tropical forests on longer time scales\u003csup\u003e29\u003c/sup\u003e. In this sense, our data will work as long-term evidence that the CO\u003csub\u003e2\u003c/sub\u003e fertilization effect is a pervasive mechanism operating on millennial to orbital time scales. Evidently, the role of precipitation and temperature cannot be neglected\u003csup\u003e29\u003c/sup\u003e. Monitoring Brazilian non-Amazon tropical forests shows that recent drying and warming trends in the southeastern region have increased the annual carbon loss, turning carbon sink areas into carbon sources\u003csup\u003e62\u003c/sup\u003e. Considering this view, we hypothesize that past millennial-scale decreases in precipitation or even the drier condition of the Last Interglacial for the southern tropics\u003csup\u003e25\u003c/sup\u003e still yielded a sufficient rainfall supply to allow the CO\u003csub\u003e2\u003c/sub\u003e fertilization effect to occur. In this scenario, dry seasons likely do not exceed four months, and the range of CO\u003csub\u003e2\u003c/sub\u003e variability is not large enough to cause saturation within enzymatic scales\u003csup\u003e29\u003c/sup\u003e. Our study sheds light on the role of humid forests as carbon sinks during past periods of natural warming, working likely as negative feedback to slow down global warming and capture carbon released from the deep ocean. Deforestation of remaining Atlantic Forest areas seriously threatens any future carbon-induced biomass gain, urging protection and reforestation initiatives to preserve its natural long-term capacity in carbon storage.\u003c/p\u003e\n"},{"header":"Methods","content":"\u003cp\u003eCore GL-1090 and age model\u003c/p\u003e\n\u003cp\u003eSediment core GL-1090 was collected in subtropical western South Atlantic (Santos basin - 24.92 \u0026ordm;S, 42.51 \u0026ordm;W) by Petrobras at a water depth of 2225 m. GL-1090 consists mostly of greenish to olive glacial sediments somewhat rich in foraminifera-bearing silty clay with Last Interglacial sediments represented by whitish clays\u003csup\u003e26\u003c/sup\u003e. The uppermost circulation in the region is dominated by the southward-flowing Brazil current that originates at ~ 10 \u0026ordm;S from the southern branch of the bifurcation of the South Equatorial Current\u003csup\u003e63\u003c/sup\u003e. Several minor rivers drain the narrow coastal plain north of the core location, with the Para\u0026iacute;ba do Sul the most important. About 10 \u0026deg;S south of the GL-1090 site, the Plata River meets the subtropical Atlantic Ocean, in which the Plata Basin represents the largest source of terrigenous material to the western South Atlantic\u003csup\u003e50\u003c/sup\u003e. The chronology of the 1914 cm sediment length is resolved by radiocarbon dating and benthic foraminifera\u0026nbsp;\u0026delta;\u003csup\u003e18\u003c/sup\u003eO tuning with sediment core MD95-2042. The age model employed was modified after refs.\u003csup\u003e27,64\u003c/sup\u003e with a new tie-point collection during Termination II and throughout MIS 5. Final interpolation occurred on Bacon 2.3, which creates a more realistic Bayesian sediment accumulation history\u003csup\u003e65\u003c/sup\u003e.\u003c/p\u003e\n\u003cp\u003eAverage chain length of \u003cem\u003en\u003c/em\u003e-alkanes and brGDGT\u003c/p\u003e\n\u003cp\u003eThe \u003cem\u003en\u003c/em\u003e-alkanes and brGDGTs were analyzed between 150.51 - 64.86 ka (689 \u0026ndash; 1591 cm) along core GL-1090. Lipids were solvent extracted from freeze-dried sediments with sonication and separated into three fractions by silica gel chromatography following the procedures described in ref.\u003csup\u003e66\u003c/sup\u003e. \u003cem\u003en\u003c/em\u003e-alkanes were analyzed on an Agilent 6890N gas chromatography coupled to a flame ionization detector (GC-FID) and equipped with a 30 m DB-5 capillary column (0.32 mm internal diameter, 0.25 \u0026micro;m film thickness). The detector was set at 330 \u0026deg;C. \u0026nbsp;The oven temperature program was initiated at 50 \u0026deg;C, increased by a rate of \u0026nbsp;30 \u0026deg;C min\u003csup\u003e-1\u003c/sup\u003e to 120 \u0026deg;C, and subsequently by a rate of 5 \u0026deg;C min\u003csup\u003e-1\u0026nbsp;\u003c/sup\u003euntil 320 \u0026deg;C (held for 10 min). Helium was used as carrier gas at constant flow (2.0 mL min\u003csup\u003e-1\u003c/sup\u003e). The individual n-alkanes were quantified by comparing their peak area with the area of an internal standard. The average chain length (ACL; ref.\u0026nbsp;\u003csup\u003e67\u003c/sup\u003e) was calculated using the most abundant C\u003csub\u003e27\u003c/sub\u003e to C\u003csub\u003e33\u003c/sub\u003e odd-carbon numbered n-alkanes; ACL=\u0026nbsp;S\u0026nbsp;(i*X\u003csub\u003ei\u003c/sub\u003e )/\u0026nbsp;S\u0026nbsp;X\u003csub\u003ei\u003c/sub\u003e, where X is abundance, and i ranges from 27 to 33.\u003c/p\u003e\n\u003cp\u003eGDGTs\u0026nbsp;(Glycerol dialkyl glycerol tetraethers)\u0026nbsp;\u0026nbsp;were analyzed by high-pressure liquid chromatography coupled with mass spectrometry with an atmospheric pressure chemical ionization source (HPLC\u0026ndash;APCI-MS) using a Shimadzu LCMS 2020 in selected ion monitoring mode, equipped with two Acquity UHPLC BEH HILIC columns in tandem (150 mm \u0026times; 2.1 mm, 1.7 \u0026mu;m; Waters, USA), thermally controlled at 40 ◦C; \u0026nbsp;following the procedure detailed in ref.\u0026nbsp;\u003csup\u003e68\u003c/sup\u003e.\u003c/p\u003e\n\u003cp\u003ePotential Vegetation Model\u003c/p\u003e\n\u003cp\u003eWe used the Center for Weather Forecasting and Climate Studies Potential Vegetation Model version 2 (CPTEC-PVM2). This model is skillful in reproducing the main South American biomes like tropical forests over Amazonia and the Atlantic coastal region, savannas over central Brazil (\u0026lsquo;cerrado\u0026rsquo;), dry shrublands (\u0026lsquo;caatinga\u0026rsquo;) over northeastern Brazil and the Chaco region, grasslands over the Pampas, and semidesert vegetation over Patagonia\u003csup\u003e57\u003c/sup\u003e\u003csup\u003e,\u003c/sup\u003e\u003csup\u003e29\u003c/sup\u003e. CPTEC-PVM2 shows a reasonable performance over South America due to considering seasonality as a factor delimitating savannas and forests. CPTEC-PVM2 takes into account plant physiological responses to this seasonality. The biome allocation rules rely mainly on a given grid cell\u0026apos;s optimum net primary productivity values, which demands gross primary productivity and plant respiration calculation. This is done aside with a water balance submodel using 1961 \u0026ndash; 1990 surface temperature and precipitation climatologies from http://climate.geog.udel.edu/~climate/html_pages/download.html. Global and especially South American net primary productivity simulated by CPTEC-PVM2 is comparable to that from observations and other models\u003csup\u003e29\u003c/sup\u003e. In this study, we run a \u0026ldquo;CO\u003csub\u003e2\u003c/sub\u003e-only\u0026rdquo; experiment with atmospheric carbon dioxide concentrations relative to the penultimate glacial maximum (180 ppm) and Last Interglacial (280 ppm) in which the climate (precipitation and temperature) are kept unchanged as taken from 1961 \u0026ndash; 1990 average.\u003c/p\u003e\n\u003cp\u003eCorrelation analysis\u003c/p\u003e\n\u003cp\u003eCorrelation exercises were done in the Python 3.9 application Pyleoclim\u003csup\u003e69\u003c/sup\u003e. Merged\u0026nbsp;atmospheric CO\u003csub\u003e2\u003c/sub\u003e from refs.\u003csup\u003e22,23\u003c/sup\u003e and GL-1090 ACL were previously interpolated to their mean resolution and standardized with respective Pyleoclim tools. We used time-series correlation with the default isospectral method accompanied by 5,000 Monte Carlo runs. Wavelet coherence analysis was realized over the same data pair with 1,000 Monte Carlo runs.\u003c/p\u003e"},{"header":"Declarations","content":"\u003cp\u003eAcknowledgments\u003c/p\u003e\n\u003cp\u003eWe acknowledge Petrobras by the cession of sediment core GL-1090. This work was supported by the BARISTA project funded through the French National program LEFE, and by the CAPES/Paleoceano Project (23038.001417/2014e7), CAPES-IODP/Aspecto Project (88887.091731/2014e01), Project CLIMATE/Print-CAPES (88887.310301/2018e00). We acknowledge the support of the CAPES-COFECUB program through their funding of actions 32/2022 and Te 1003/23 (project numbers 8881.712022/2022-1 and 49558SM) and by the CNRS-France International Research Project SARAVA (Drivers of past changes in South Atlantic circulation and tropical South American climate). TPS also thanks the Programa de Apoio a Novos Docentes (process 22.1.09345.01.2) of the University of S\u0026atilde;o Paulo. JFC thanks the support provided by CNPq (140443/2016e9) and CAPES/Programas Estrategicos (88881.145911/2017e01). RAN thanks the French Ministry of Europe and Foreign Affairs for its financial support within the MOPGA Fellowship Program. IMV acknowledges the support of FAPERJ (SEI-260003/000677/2023) (JCNE grant 200.120/2023\u0026ndash;281226)\u003c/p\u003e\n\u003cp\u003eAuthor contribution\u003c/p\u003e\n\u003cp\u003eTPS: Writing - Original Draft, Conceptualization, Formal analysis, Data Curation. IB: Writing - Original Draft, Writing - Review \u0026amp; Editing, Resources, Supervision, Funding acquisition. JFC: Formal analysis, Investigation. AMSR: Formal analysis, Investigation. MPL: Writing - Review \u0026amp; Editing, Data Curation. AH: Writing - Review \u0026amp; Editing, Resources, Supervision, Funding acquisition. MHS: Formal analysis. MRL: Formal analysis. RAN: Writing - Review \u0026amp; Editing. IMV: Writing - Review \u0026amp; Editing. RLS: Writing - Review \u0026amp; Editing, Formal analysis. MCB: Writing - Review \u0026amp; Editing, Formal analysis, Supervision. ALSA: Supervision, Project administration, Funding acquisition.\u003c/p\u003e\n\u003cp\u003eData availability statement\u003c/p\u003e\n\u003cp\u003eData generated for this study accompanies the submission as supplementary material.\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eCompeting Interests Statement\u003c/p\u003e\n\u003cp\u003eAuthors declare non-financial competing interests\u003c/p\u003e"},{"header":"References","content":"\u003col\u003e\n\u003cli\u003eMyers, N., Mittermeier, R. A., Mittermeier, C. G., Da Fonseca, G. A. B. \u0026amp; Kent, J. Biodiversity hotspots for conservation priorities. \u003cem\u003eNature\u003c/em\u003e \u003cstrong\u003e403\u003c/strong\u003e, 853\u0026ndash;858 (2000).\u003c/li\u003e\n\u003cli\u003eRibeiro, M. C. \u003cem\u003eet al.\u003c/em\u003e The Brazilian Atlantic Forest: A Shrinking Biodiversity Hotspot. in \u003cem\u003eBiodiversity Hotspots\u003c/em\u003e (eds. Zachos, F. E. \u0026amp; Habel, J. 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