A Support Vector Machine Based Artificial Intelligence Technique Using Genetic Algorithms to Screen Metabolites Associated with Heart Disease in the Qatari Population

preprint OA: closed
Full text JSON View at publisher

Abstract

Abstract Algorithms for feature selection are growing in interest among researchers aiming to connect specific features in a dataset with specific classifications. Recent developments in Support Vector Machine-based artificial intelligence algorithms have demonstrated excellent classification performance in highly nonlinear data. However, identifying which features contribute most to classification remains challenging, especially when datasets include hundreds of variables. Initially, features must be screened to narrow down the set for deeper analysis. Metabolomics datasets are one such case, where many features must be examined to determine those associated with heart disease diagnosis. This work applies a Genetic Algorithm, incorporating a penalized likelihood approach with Support Vector Machines for mutation, to stochastically search the feature space. A large-scale simulation study demonstrates that the proposed method achieves a high true feature identification rate while maintaining a reasonable false identification rate. The method is then applied to a Qatar BioBank dataset focused on heart disease, reducing the number of candidate metabolites from 232 to 37.
Full text 10,625 characters · extracted from preprint-html · click to expand
A Support Vector Machine Based Artificial Intelligence Technique Using Genetic Algorithms to Screen Metabolites Associated with Heart Disease in the Qatari Population | Research Square window.SnipcartSettings = { analytics: { enabled: false } }; (function() { var accessVector = localStorage.getItem('access_vector') || ''; window.dataLayer = window.dataLayer || []; if (accessVector) { window.dataLayer.push({ user: { profile: { profileInfo: { snid: accessVector } } } }); } })(); (function(w,d,s,l,i){w[l]=w[l]||[];w[l].push({'gtm.start':new Date().getTime(),event:'gtm.js'});var f=d.getElementsByTagName(s)[0],j=d.createElement(s),dl=l!='dataLayer'?'&l='+l:'';j.async=true;j.src='https://www.googletagmanager.com/gtm.js?id='+i+dl;f.parentNode.insertBefore(j,f);})(window,document,'script','dataLayer','GTM-K279D39R'); Browse Preprints In Review Journals COVID-19 Preprints AJE Video Bytes Research Tools Research Promotion AJE Professional Editing AJE Rubriq About Preprint Platform In Review Editorial Policies Our Team Advisory Board Help Center Sign In Submit a Preprint Cite Share Download PDF Research Article A Support Vector Machine Based Artificial Intelligence Technique Using Genetic Algorithms to Screen Metabolites Associated with Heart Disease in the Qatari Population Edward L. Boone, Ryad A. Ghanam, Faten S. Alamri, Elizabeth B. Amona This is a preprint; it has not been peer reviewed by a journal. https://doi.org/ 10.21203/rs.3.rs-6565029/v1 This work is licensed under a CC BY 4.0 License Status: Posted Version 1 posted You are reading this latest preprint version Abstract Algorithms for feature selection are growing in interest among researchers aiming to connect specific features in a dataset with specific classifications. Recent developments in Support Vector Machine-based artificial intelligence algorithms have demonstrated excellent classification performance in highly nonlinear data. However, identifying which features contribute most to classification remains challenging, especially when datasets include hundreds of variables. Initially, features must be screened to narrow down the set for deeper analysis. Metabolomics datasets are one such case, where many features must be examined to determine those associated with heart disease diagnosis. This work applies a Genetic Algorithm, incorporating a penalized likelihood approach with Support Vector Machines for mutation, to stochastically search the feature space. A large-scale simulation study demonstrates that the proposed method achieves a high true feature identification rate while maintaining a reasonable false identification rate. The method is then applied to a Qatar BioBank dataset focused on heart disease, reducing the number of candidate metabolites from 232 to 37. Machine Learning Genetic Algorithm Support Vector Machines Classification Heart Disease Metabolites Full Text Additional Declarations No competing interests reported. Cite Share Download PDF Status: Posted Version 1 posted You are reading this latest preprint version Research Square lets you share your work early, gain feedback from the community, and start making changes to your manuscript prior to peer review in a journal. As a division of Research Square Company, we’re committed to making research communication faster, fairer, and more useful. We do this by developing innovative software and high quality services for the global research community. Our growing team is made up of researchers and industry professionals working together to solve the most critical problems facing scientific publishing. Also discoverable on Platform About Our Team In Review Editorial Policies Advisory Board Help Center Resources Author Services Accessibility API Access RSS feed Manage Cookie Preferences © Research Square 2026 | ISSN 2693-5015 (online) Privacy Policy Terms of Service Do Not Sell My Personal Information {"props":{"pageProps":{"initialData":{"identity":"rs-6565029","acceptedTermsAndConditions":true,"allowDirectSubmit":true,"archivedVersions":[],"articleType":"Research Article","associatedPublications":[],"authors":[{"id":450209285,"identity":"5e8d5f2f-cc55-4877-b0db-4f61e44416c3","order_by":0,"name":"Edward L. Boone","email":"","orcid":"","institution":"Virginia Commonwealth University","correspondingAuthor":false,"prefix":"","firstName":"Edward","middleName":"L.","lastName":"Boone","suffix":""},{"id":450209286,"identity":"d923b86e-3c13-45b8-9a1e-faabced5b023","order_by":1,"name":"Ryad A. Ghanam","email":"","orcid":"","institution":"Virginia Commonwealth University, School of the Arts in Qatar","correspondingAuthor":false,"prefix":"","firstName":"Ryad","middleName":"A.","lastName":"Ghanam","suffix":""},{"id":450209288,"identity":"628170f7-b4ef-46a4-91b1-dbb8befc46c9","order_by":2,"name":"Faten S. Alamri","email":"","orcid":"","institution":"Princess Nourah bint Abdulrahman University","correspondingAuthor":false,"prefix":"","firstName":"Faten","middleName":"S.","lastName":"Alamri","suffix":""},{"id":450209289,"identity":"0644e736-6445-4fda-9ddf-4cd0aee1cb79","order_by":3,"name":"Elizabeth B. Amona","email":"data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAZAAAAAyAQMAAABI0h/eAAAABlBMVEX///8AAABVwtN+AAAACXBIWXMAAA7EAAAOxAGVKw4bAAAArklEQVRIiWNgGAWjYPCCA3IQmo0ELcaka0lsIFoL/7TDxx78qLiTvuH4GQOGD2WHCWuRuJ2Wbthz5lnuhjM5BowzzhGhheF2jpkEb9vh3JkzeAyYgQzCOuSBWiT//jucLgnS8pcYLQZALdK8DYcT+CWAWhiJ0WJ4Oy1NWubYM8N+nrSCgz3n0glrkbudfEzyTc0deTb2wxsf/CizJqwFBRwgUf0oGAWjYBSMAlwAALXtO12JdnNAAAAAAElFTkSuQmCC","orcid":"","institution":"Virginia Commonwealth University","correspondingAuthor":true,"prefix":"","firstName":"Elizabeth","middleName":"B.","lastName":"Amona","suffix":""}],"badges":[],"createdAt":"2025-04-30 12:55:24","currentVersionCode":1,"declarations":"","doi":"10.21203/rs.3.rs-6565029/v1","doiUrl":"https://doi.org/10.21203/rs.3.rs-6565029/v1","draftVersion":[],"editorialEvents":[],"editorialNote":"","failedWorkflow":false,"files":[{"id":82994309,"identity":"9cfc0608-c79b-464e-bb47-ebd54969aa1c","added_by":"auto","created_at":"2025-05-18 18:01:30","extension":"pdf","order_by":1,"title":"","display":"","copyAsset":false,"role":"manuscript-pdf","size":398607,"visible":true,"origin":"","legend":"","description":"","filename":"EIMetabolitesArticle.pdf","url":"https://assets-eu.researchsquare.com/files/rs-6565029/v1_covered_dddf0b09-6288-4e4d-8248-6e7638c72378.pdf"}],"financialInterests":"No competing interests reported.","formattedTitle":"A Support Vector Machine Based Artificial Intelligence Technique Using Genetic Algorithms to Screen Metabolites Associated with Heart Disease in the Qatari Population","fulltext":[],"fulltextSource":"","fullText":"","funders":[],"hasAdminPriorityOnWorkflow":false,"hasManuscriptDocX":false,"hasOptedInToPreprint":true,"hasPassedJournalQc":"","hasAnyPriority":true,"hideJournal":true,"highlight":"","institution":"","isAcceptedByJournal":false,"isAuthorSuppliedPdf":true,"isDeskRejected":"","isHiddenFromSearch":false,"isInQc":false,"isInWorkflow":false,"isPdf":true,"isPdfUpToDate":true,"isWithdrawnOrRetracted":false,"journal":{"display":true,"email":"[email protected]","identity":"researchsquare","isNatureJournal":false,"hasQc":true,"allowDirectSubmit":true,"externalIdentity":"","sideBox":"","snPcode":"","submissionUrl":"/submission","title":"Research Square","twitterHandle":"researchsquare","acdcEnabled":true,"dfaEnabled":false,"editorialSystem":"","reportingPortfolio":"","inReviewEnabled":false,"inReviewRevisionsEnabled":true},"keywords":"Machine Learning, Genetic Algorithm, Support Vector Machines, Classification, Heart Disease, Metabolites","lastPublishedDoi":"10.21203/rs.3.rs-6565029/v1","lastPublishedDoiUrl":"https://doi.org/10.21203/rs.3.rs-6565029/v1","license":{"name":"CC BY 4.0","url":"https://creativecommons.org/licenses/by/4.0/"},"manuscriptAbstract":"\u003cp\u003eAlgorithms for feature selection are growing in interest among researchers aiming to connect specific features in a dataset with specific classifications. Recent developments in Support Vector Machine-based artificial intelligence algorithms have demonstrated excellent classification performance in highly nonlinear data. However, identifying which features contribute most to classification remains challenging, especially when datasets include hundreds of variables. Initially, features must be screened to narrow down the set for deeper analysis. Metabolomics datasets are one such case, where many features must be examined to determine those associated with heart disease diagnosis. This work applies a Genetic Algorithm, incorporating a penalized likelihood approach with Support Vector Machines for mutation, to stochastically search the feature space. A large-scale simulation study demonstrates that the proposed method achieves a high true feature identification rate while maintaining a reasonable false identification rate. The method is then applied to a Qatar BioBank dataset focused on heart disease, reducing the number of candidate metabolites from 232 to 37.\u003c/p\u003e","manuscriptTitle":"A Support Vector Machine Based Artificial Intelligence Technique Using Genetic Algorithms to Screen Metabolites Associated with Heart Disease in the Qatari Population","msid":"","msnumber":"","nonDraftVersions":[{"code":1,"date":"2025-05-02 02:42:42","doi":"10.21203/rs.3.rs-6565029/v1","editorialEvents":[{"type":"communityComments","content":0}],"status":"published","journal":{"display":true,"email":"[email protected]","identity":"researchsquare","isNatureJournal":false,"hasQc":true,"allowDirectSubmit":true,"externalIdentity":"","sideBox":"","snPcode":"","submissionUrl":"/submission","title":"Research Square","twitterHandle":"researchsquare","acdcEnabled":true,"dfaEnabled":false,"editorialSystem":"","reportingPortfolio":"","inReviewEnabled":false,"inReviewRevisionsEnabled":true}}],"origin":"","ownerIdentity":"f59f8448-6468-4fe7-9834-374dc3638c38","owner":[],"postedDate":"May 2nd, 2025","published":true,"recentEditorialEvents":[],"rejectedJournal":[],"revision":"","amendment":"","status":"posted","subjectAreas":[],"tags":[],"updatedAt":"2025-05-18T17:53:23+00:00","versionOfRecord":[],"versionCreatedAt":"2025-05-02 02:42:42","video":"","vorDoi":"","vorDoiUrl":"","workflowStages":[]},"version":"v1","identity":"rs-6565029","journalConfig":"researchsquare"},"__N_SSP":true},"page":"/article/[identity]/[[...version]]","query":{"redirect":"/article/rs-6565029","identity":"rs-6565029","version":["v1"]},"buildId":"8U1c8b4HqxoKbykW_rLl7","isFallback":false,"isExperimentalCompile":false,"dynamicIds":[84888],"gssp":true,"scriptLoader":[]}

Text is read by the "Ask this paper" AI Q&A widget below. Extraction quality varies by source — PMC NXML preserves structure cleanly, OA-HTML may include some navigation residue, and OA-PDF can have broken hyphenation. The publisher copy (via DOI) is the canonical version.

My notes (saved in your browser only)

Ask this paper AI returns verbatim quotes from the full text · source: preprint-html

Answers must be backed by verbatim quotes from this paper's full text. Hallucinated quotes are dropped automatically; if no verbatim passage answers the question, we say so. How this works

Citation neighborhood (no data yet)

We don't have any in-corpus citations linked to this paper yet. This is a recent paper (2025) — citers typically take a year or two to land, and the OpenAlex reference graph may still be filling in.

Source provenance

europepmc
last seen: 2026-05-20T01:45:00.602351+00:00