webMCP-counter: a web interface for transcriptomics-based quantification of immune and stromal cells in heterogeneous human or murine samples
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Abstract
Summary We previously reported MCP-counter and mMCP-counter, methods that allow precise estimation of the immune and stromal composition of human and murine samples from bulk transcriptomic data, but they were only distributed as R packages. Here, we report webMCP-counter, a user-friendly web interface to allow all users to use these methods, regardless of their proficiency in the R programming language. Availability and Implementation Freely available from http://134.157.229.105:3838/webMCP/ . Website developed with the R package shiny. Source code available from GitHub: https://github.com/FPetitprez/webMCP-counter .
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- last seen: 2026-05-19T01:45:01.086888+00:00