Advances
Bacteriocins have been generally defined as ribosomally synthesized antimicrobial peptide molecules that can either be enzymatically modified or remain unaltered (Cotter et al. 2013 ; Johnson et al. 2018 ; Simons et al. 2020 ; Heilbronner et al. 2021 ). They are abundant and highly diverse with widespread synthesis among different groups of bacteria (Riley and Wertz 2002 ; Cotter et al. 2013 ; Fernández-Fernández et al. 2023c ). It has been suggested that 30% to 99% of Archaea and bacterial species synthesize one or more bacteriocins (Klaenhammer 1988 ; Riley 1998 ). Typically, bacteriocins have a narrow spectrum of bactericidal or bacteriostatic activity against taxonomically related bacteria (O’Connor et al. 2018 ; Simons et al. 2020 ; Darbandi et al. 2022 ), but occasionally they can have a broad spectrum of activity against unrelated bacteria (Cotter et al. 2005 ; Mills et al. 2011 ; Silva et al. 2018 ). The biosynthetic mechanisms for these antimicrobial peptides are relatively simple and often encoded in transferable elements such as plasmids and transposons (Klaenhammer 1993 ; And and Hoover 2003 ; Fernández-Fernández et al. 2023b ). Bacteriocins are synthesized as biologically inactive precursor peptides harboring an N-terminal leader sequence (Kanmani et al. 2013 ; Liu et al. 2023 ). These precursor peptides are often detached from the leader peptide and exported outside the cell after post-translational modifications (PTMs) (Riley and Wertz 2002 ; Mokoena 2017 ; Soltani et al. 2021a ). Bacteriocinogenic bacteria have developed mechanisms to protect themselves from being killed by the bacteriocins they produce. These mechanisms include using efflux pumps to export bacteriocins from inside the cells to the outside, synthesizing self-immunity proteins, or using both mechanisms in some instances (Bastos et al. 2015 ; Ben Lagha et al. 2017 ; Bountra et al. 2017 ).
The function of bacteriocins depends on the recognition of specific receptors and ionic interactions with the hydrophobic surface molecules of target cells (Soliman et al. 2010 ; Todorov et al. 2022 ; Śmiałek-Bartyzel et al. 2023 ). This is typically considered the initial step of the antimicrobial mechanism of action exerted by bacteriocins. To infiltrate the cell membrane and compromise cellular integrity, bacteriocins must effectively recognize these receptors and also express physicochemical interactions with the target cells. For example, receptors like mannose phosphotransferase and lipid II are primarily recognized by class II, unmodified bacteriocins (such as pediocin PA-1 and enterocin CRL35) and class I, post-translationally modified bacteriocins (RiPPs) (such as nisin and mutacin 1140), respectively (Grein et al. 2019 ; Wang et al. 2020c ; Zhu et al. 2022 ). These intricate interactions between bacteriocins and target cells are often influenced by various physicochemical factors such as temperature, pH, and other chemical constituents. These factors also affect cell membrane integrity and physiological conditions, which consequently impact bacteriocin interactions with specific receptors or directly with the cell membrane (Todorov et al. 2022 ). Depending on their primary structure and complexity, bacteriocins exert antimicrobial activity through distinct mechanisms of action on susceptible microbial strains. Some bacteriocins cause cell lysis by inhibiting cell wall synthesis or forming pores in the cell membrane. Others act inside the target cells, inhibiting protein production and gene expression (Dobson et al. 2012 ; Darbandi et al. 2022 ).
Since the discovery of bacteriocins about a century ago, there has been an increasing number of characterized and identified bacteriocins. These bacteriocins are heterogeneous and highly diverse, possessing a wide range of complexities, structures, sizes, mechanisms of action, spectra of activity, and target cells. To better collate and understand the structural and functional diversities of bacteriocins, some integrated open-access databases and tools have been developed. These include antiSMASH 2.0 [ http://antismash.secondarymetabolites.org/ (Blin et al. 2013 )], BAGEL3 [ http://bagel.molgenrug.nl/ (van Heel et al. 2013 )], ADAM, [ http://bioinformatics.cs.ntou.edu.tw/ADAM (Lee et al. 2015 )], BACTIBASE, [ http://bactibase.hammamilab.org (Soltani et al. 2021a )], NucleBact [ https://pubmlst.org/projects/nuclebact (Sharp et al. 2017 )], LABiocin [ https://bio.tools/LABiocin_database (Kassaa et al. 2019 )], BUR—bacteriocins database URMITE [ https://drissifatima.wixsite.com/bacteriocins (Drissi et al. 2015 )], Bacteriocin ( https://aapep.bocsci.com/ ), and Syngulon ( https://syngulon.com/ ). Following the first bacteriocin classification by Klaenhammer ( 1993 ), several classifications have been proposed and used in recent years. Due to the advent of cutting-edge high throughput technologies and new developments in bacteriocins’ structures, functions, and mechanisms of action, the classification of bacteriocins progressively evolved, undergoing continuous modification. These classification systems primarily hinge on multiple factors such as physical properties, chemical structure, molecular composition, size, stability, mechanism of action, post-translational modification, microbial target, organism producing them, and cell wall type (Klaenhammer 1993 ; Dobson et al. 2012 ; Arnison et al. 2013 ; Cotter et al. 2013 ; Bastos et al. 2015 ; Alvarez-Sieiro et al. 2016 ; Johnson et al. 2018 ; Soltani et al. 2021a ).
Building on the previous classification (Cotter et al. 2013 ) and recent advances in ribosomally synthesized and post-translationally modified peptides (RiPPs), the latest and updated classification system proposed by Soltani et al. ( 2021a ) suggests two large classes of bacteriocins. Class I, also referred to as RiPPs have molecular masses < 5 kDa and contain post-translational modifications (PTMs). Class I is subdivided into 12 subclasses, including lanthipeptides, sactipeptides, linear azole(ine)-containing peptides (LAP), circular peptides, glycocins, nucleotide peptides, lasso peptides, siderophore peptides, and Bottromycins from both Gram-positive and Gram-negative bacteria (Cotter et al. 2013 ; Norris and Patchett 2016 ; Mills et al. 2017 ). Additionally, thiopeptides and linaridins from Actinobacteria (Bagley et al. 2005 ; Claesen and Bibb 2010 ), and cyanobactins produced by different cyanobacteria (Martins and Vasconcelos 2015 ; Martins et al. 2018 ) are subclasses of class I bacteriocin. Class II bacteriocins, also known as unmodified bacteriocins, have molecular masses < 10 kDa and are subdivided into three subclasses: pediocin-like bacteriocins (single peptides containing the YGNGV consensus sequence), two peptides bacteriocins (containing two or more unmodified peptides), and non-pediocin-like bacteriocins (unmodified linear single peptides devoid of the YGNGV) (Mills et al. 2017 ; Soltani et al. 2021a ) (Fig. 1 ). Generally, the PTMs make class I bacteriocins more stable to extreme pHs, high temperatures, or proteolysis than class II bacteriocins. However, the presence of disulfide bridges in class II bacteriocins relatively increases their stability (Soltani et al. 2021a ). Fig. 1 Updated classification of bacteriocins based on post-translationally modified and unmodified peptides (Adopted from Mills et al. 2017 ; Soltani et al. 2021a )
Updated classification of bacteriocins based on post-translationally modified and unmodified peptides (Adopted from Mills et al. 2017 ; Soltani et al. 2021a )
Bacteriocins are abundant and heterogeneous in nature. Bacteriocin-producing bacteria can be found in both conventional and unconventional sources. While the human gut is considered a conventional source of bacteriocinogenic bacteria, unconventional sources include soil, water, foods/food products, animal guts, and the vagina and nose of animals and humans (Ryan et al. 2008 ; Vera Pingitore et al. 2009 ; Lo Verso et al. 2018 ; Zielińska and Kolożyn-Krajewska 2018 ; Fuochi et al. 2019 ; Reuben et al. 2020 ; Darbandi et al. 2022 ; Fernández-Fernández et al. 2023a , b , c , d ; Navarro et al. 2023 ). Common bacteriocin-producing bacteria in humans include Enterococcus , Escherichia coli , Lactobacillus , Lactococcus , Pediococcus , Staphylococcus , and Streptococcus (Ryan et al. 2008 ; Lakshminarayanan et al. 2013 ; Zalewska et al. 2018 ; Laux et al. 2019 ; Kassem et al. 2021 ; Darbandi et al. 2022 ). These bacteria not only act as the first line of defense against invading pathogens, but their bacteriocins also play a role in enhancing the immune system (Zipperer et al. 2016 ; O’Sullivan et al. 2019 ).
Interestingly, most of the bacteriocins that have been successfully characterized and identified are produced by lactic acid bacteria (LAB), which are frequently found in milk and dairy products. LAB is a diverse group of bacteria that has garnered significant interest due to their widely recognized safety status, known as ‘Generally Recognized as Safe’ (GRAS) and ‘Qualified Presumption of Safety’ (QPS) status (Reuben et al. 2020 ; Zimina et al. 2020 ). Some well-known bacteriocinogenic bacteria commonly found in dairy products include Lactococcus lactis and Lactobacillus plantarum (found in camel, cow, and goat milk), Lactobacillus kefiranofaciens and L. plantarum (found in cheese and kefir), and Lactobacillus brevis , Enterococcus spp., and Streptococcus thermophilus (found in other dairy products) (Reuben et al. 2020 ; Zimina et al. 2020 ; Benkirane et al. 2022 ). Lactobacillus acidophilus is commonly isolated from yogurt and fermented soy products as a bacteriocin-producing bacterium, while Bifidobacterium lacti s and Brevibacillus brevis are most commonly found in raw milk (Darbandi et al. 2022 ). In milk products, Lactobacillus , Lactococcus , and Streptococcus are the predominant bacteriocin-producing bacteria.
From fermented raw or cooked meat products, Lactobacillus brevis , Lactobacillus curvatus , Lactobacillus fermentum , Lactobacillus plantarum subsp. plantarum , Enterococcus faecium UAM1, Pediococcus pentosaceus , and P. accidilactici are widely isolated bacteriocinogenic bacteria (Aymerich et al. 2011 ; Zielińska and Kolożyn-Krajewska 2018 ; Khorshidian et al. 2021 ; García-López et al. 2023 ; Kaveh et al. 2023 ). These bacteria exhibit inhibitory activity against major foodborne pathogens including Aeromonas hydrophila , Listeria monocytogenes , and Staphylococcus aureus , thereby preventing their growth in meat products (Winkowski and Montville 1992 ; Khan et al. 2016 ). E . faecium HL7, L . plantarum , and L . brevis LAP2 are commonly associated with fish and seafood (Vijayabaskar and Somasundaram 2008 ; Gómez-Sala et al. 2015 ; Ringø et al. 2018 ), while L . brevis , L. paracasei , L. pentosus , L. fermentum , L. plantarum , Weissella , Pediococcus , and Enterococcus durans are known bacteriocin-producing bacteria found in fruits and vegetables (Knorr 1998 ; Linares-Morales et al. 2020 ). Soil is another extensively studied unconventional source of bacteriocinogenic bacteria. Many bacteriocins obtained from soilborne bacteria and rhizosphere exhibit inhibitory and biocidal activity against phytopathogens, pests, and insects, making them useful for plant protection as well as biopesticides, bioinsecticides, and growth stimulants (Lv et al. 2017 ; Zimina et al. 2020 ). Soil bacteria, including Pseudomonas putida BW11M1, Bacillus subtilis 14B, and Clavibacter michiganensis subsp. michiganensis ( Cmm ) produce bacteriocin putidacin, Bac 14B, and michiganin A which have inhibitory activity against P. putida GR12-2R3, Agrobacter tumefaciens , and C. michiganensis subsp. Sepedonicus , the etiological agents of plant diseases. Similarly, Bacillus clausii GM17 produces bacteriocin Bac GM17 which has broad-spectrum antifungal and antibacterial activity against multiple phytopathogens (Zimina et al. 2020 ). Recently, our group characterized and identified different bacteriocins of staphylococcal origin from multiple sources including humans, food, migratory birds, pets, wild animals, and the environment (Fernández-Fernández et al. 2022a , b , 2023a ; b ).
Applications
As the science of bacteriocins steadily progresses, their areas of application are increasing proportionately, encompassing previously unknown areas. Since their discovery, bacteriocins have been used to improve food production, preservation, and safety in the food industry. However, their potential has now extended to various fields, including biotechnology, ecology, pharmaceuticals, agriculture, clinical settings, and veterinary medicine. Bacteriocins offer sustainable solutions to a wide range of scientific problems. Here, we critically evaluated and compiled the significant advances and emerging roles of bacteriocins as well as the latest bacteriocin-related innovations aimed at harnessing their heterogeneous potential and prospects for multisectoral applications in health and agrifood systems. Table 2 summarizes some bacteriocins with potential applications in different systems. Table 2 Bacteriocins with potential applications Bacteriocin Producer Microbiome modulation Effect Model References Nisin Z Lactococcus lactis Reduction of enteric pathogens Mouse Millette et al. ( 2008 ) Nisin L. lactis Modulation of microbiome-brain-gut axis neurochemicals Mice Jia et al. ( 2018 ) Nisin Z L. lactis Reduction of intestinal colonization of vancomycin-resistant enterococci (VRE) and Immunomodulatory effect Murine Millette et al. ( 2008 ) Nisin P L. lacti s SMN003 Reduction of S. aureus and regulation of cytokine concentration to reduce uterine inflammation in rats Rat Dabour et al. ( 2009 ) Nisin L. lactis Control of meningitis, sepsis, and pneumonia In vitro and mouse Goldstein ( 1998 ) Nisin A L. lactis Decrease the levels of IL-6, IL-8, and TNF-α and the growth of bacteria wound Ex vivo Mouritzen et al. ( 2019 ) Sakacin A (SakA), pediocin PA-1 (PedPA-1), enterocins P, Q and L50 (enterocins), plantaricins EF and JK (plantaricins) and garvicin ML (GarML) Multiple bacteriocinogenic strains Modulation of the abundance of gut microbiota and structure Mice Umu et al. ( 2016 ) Bactofencin A Lactobacillus salivarius DPC6502 Modulation of gut microbial populations Simulated colon Guinane et al. ( 2016 ) Bactofencin A L. salivarius Reduction of Listeria and staphylococcal counts In vitro O’Connor et al. ( 2018 ) Bactofencin A L. salivariu s DPC6502 Increase relative abundances of Bifidobacterium and Streptococcus while lowering the abundances of Blautia and Clostridium spp. Mice Sun et al. ( 2020 ) Lacticin3147 L. lactis DPC3147 Reduction of Clostridium difficile associated diarrhea (CDAD) In vitro Rea et al. ( 2007 ) Lactocin 160 L. rhamnosus Control Escherichia coli and Bordetella pertussis In vitro Belfiore et al. ( 2007 ) Bacteriocin Abp118 L. salivarius Reduction of Listeriosis Murine and pigs Riboulet-Bisson et al. ( 2012 ) Bacteriocin OR-7 L. salivarius NRRLB Reduction of Campylobacter jejuni counts Chicken Ilinskaya et al. ( 2017 ) Erwinaocin NA4 Erwinia carotovora NA4 Reduction of coliphage In vitro Dey et al. ( 2021 ) Pediocin PA1 Pediococcus acidilactici Control listeriosis Mouse Dabour et al. ( 2009 ) Pediocin AcH P. acidilactici Reduction of enteric pathogens Mouse Millette et al. ( 2008 ) Enterocin A/P Enterococcus faecium P13 Modulation of gut microbiota, improving growth and immune response Rabbit Pogány Simonová et al. ( 2022 ) Microcin M Escherichia coli MC4100 Inhibition of intestinal pathogenic bacteria and reduction of intestinal inflammation Mice Sassone-Corsi et al. ( 2016 ) Microcin J25 E. coli Modulation of porcine microbiota composition and metabolome PolyFermS in vitro continuous fermentation Naimi et al. ( 2022 ) Microcin J25 E. coli Improve intestinal microbiota and inflammation of broiler and mouse caused by Salmonella and Enterotoxigenic E. coli Broiler and mouse Yu et al. ( 2018 ), Wang et al. ( 2020b ) Gassericin A L. gasseri LA39 Increase relative abundances of beneficial lactic acid bacteria, promote fluid absorption, and decrease diarrhoea Early weaned piglets Hu et al. ( 2018 ) Lmo2776 Listeria monocytogenes Target the commensal Prevotella copri and modulation of intestinal infection Mice Rolhion et al. ( 2019 ) Salivaricin LHM L. salivarius Antibacterial, immunomodulatory, and antibiofilm Simulated urinary tract infection Mahdi et al. ( 2019 ) Plantaricin EF L. plantarum Intestinal microbial modulation, maintains epithelial barrier integrity, reduction of obesity and fat inflammation In vitro and mice Heeney et al. ( 2019 ) Sublancin Bacillus subtilis 800 Protection against methicillin-resistant Staphylococcus aureus (MRSA) and enhancement of macrophage function Mice Wang et al. ( 2018 , 2019b ) Bacteriocin Producer Bacterial infections Target microorganism Model References Bacteriocin C2-1 Ligilactobacillus salivarius C2-1 Listeria monocytogenes CICC 21633 In vitro Mu et al. ( 2024 ) Lactocin AL705 L. curvatus L. monocytogenes In vitro Melian et al. ( 2019 ) Lactocin 160 L. Rhamnosus Gardnerella vaginalis , Bacillus pertussis In epivaginal Turovskiy et al. ( 2009 ) Lacticin NK34 L. lactis S. aureus/S. simulans Mice Kim et al. ( 2010 ) Thiostrepton Streptomyces spp. Mycobacterium abscessus In vitro and zebrafish (FDA approved) Rodnina et al. ( 1999 ), Kim et al. ( 2019 ) Thuricin CD Bacillus thuringiensis DPC 6431 Clostridium difficile , L. monocytogenes In vitro and mice Rea et al. ( 2010 , 2014 ) Nisin L . lactis Staphylococcus aureus , C. difficile In vitro, mice and rat (FDA approved) Brand et al. ( 2010 ), Lay et al. ( 2016 ) Nisin F L. lactis subsp. lactis S. aureus Immunosuppressed Wistar rat De Kwaadsteniet et al. ( 2009 ) Nisin V L. lactis NZ9700 L. monocytogenes BALB/c mice Campion et al. ( 2013 ) Mutacin B-Ny266 S. mutans S. aureus , Neisseria , Helicobacter In vitro and mice Mota-Meira et al. ( 2000 , 2005 ) Mersacidin Bacillus spp. HIL-Y85/54728 Methicillin-resistant S. aureus (MRSA) In vitro and mice Brötz et al. ( 1998 ), Kruszewska et al. ( 2004 ) Mersacidin Bacillus spp. strain HIL Y-85 MRSA BALB/cA mice Kruszewska et al. ( 2004 ) Plantaricin NC8 αβ (PLNC8 αβ) L. plantarum Staphylococcus spp., Porphyromonas gingivalis In vitro Bengtsson et al. ( 2020 ) R-pyocins P. aeruginosa Pseudomonas aeruginosa In vitro Redero et al. ( 2018 ) Lassomycin Lentzea kentuckyensis Mycobacterium tuberculosis In vitro Gavrish et al. ( 2014 ) Enterocin AS-48 E. faecalis M. tuberculosis In vitro and macrophages Aguilar-Pérez et al. ( 2018 ), Cebrián et al. ( 2019 ) Durancin 61A E. durans 61A C. difficile , vancomycin-resistant enterococci, MRSA, L. innocua In vitro Hanchi et al. ( 2016 , 2017 ) Ruminococcin C Ruminococcus gnavus E1 Pathogenic clostridia and MDR strains In vitro Chiumento et al. ( 2019 ), Balty et al. ( 2019 ) Gallidermin/epidermin S. gallinarum S. epidermidis , S. aureus In vitro Bengtsson et al. ( 2018 ) Haemocin type B Haemophilus haemolyticus Haemophilus influenza In vitro Latham et al. ( 2017 ) Gassericin E L. gasseri EV1461 Pathogens associated with vaginosis In vitro Maldonado-Barragán et al. ( 2016 ) ABP-118 Lactobacillus salivarius UCC118 L. monocytogenes Mouse Corr et al. ( 2007 ) Colicin E1 and Ib E. coli H22 E. coli and Enterobacter spp. Mouse Cursino et al. ( 2006 ) Colicin FY E. coli Yersinia enterocolitica Mice Bosák et al. ( 2012 , 2018 ) Microcin C7 E. coli H22 Shigella flexneri Mouse Cursino et al. ( 2006 ) Microcin B17 E. coli Nissle 1917 Salmonella Typhimurium, S. flexneri , E. coli Infants and toddlers Henker et al. ( 2007 ) Micrcoccin P1 Staphylococcus spp. MRSA In vitro Fernández-Fernández et al. ( 2023c ) Unnamed bacteriocin L. casei L26 E. coli O111, L. monocytogenes Mouse Su et al. ( 2007 ) Unnamed bacteriocin L. johnsonii La1 Helicobacter pylori Children and adults Gotteland ( 2003 ), Cruchet et al. ( 2003 ) Salivaricin S. salivarius CRL1328 Enterococcus spp., Neisseria gonorrhoeae In vitro Juarez Tomás et al. ( 2002 ) Salivaricin A & B S. salivarius K12 Streptococcus sobrinus , S. mutans Children and adults Burton et al. ( 2006b ), Dierksen et al. ( 2007 ) Salivaricin B S. salivarius K12 Micrococcus luteus; S. anginosis; Eubacterium saburreum Humans Burton et al. ( 2006a ) Salivaricin S. salivarius K12 S. pyogenes Children Walls et al. ( 2003 ) ESL5 E. faecalis SL-5 Propionibacterium acnes In vitro and human Kang et al. ( 2009 ) Diffocin C. difficile CD4 C. difficile In vitro and mice Gebhart et al. ( 2015 ), Kåhrström ( 2015 ) Subtilosin B. subtilis Gardnerella vaginalis , L. monocytogenes , S. agalactiae In epivaginal Sutyak et al. ( 2008a , b ) Laterosporulin10 B. laterosporus SKDU10 S. aureus , M. smegmatis In vitro and macrophages Baindara et al. ( 2016 ) NVB333 lanthipeptide Actinoplanes liguriae NCIMB41362 S.aureus In vitro and mice Boakes et al. ( 2016 ) Pediocin PA-1 P. acidilactici L. monocytogenes Mouse Dabour et al. ( 2009 ) Bacteriocins ST651ea, ST7119ea, and ST7319ea E. faecium ST651ea, ST7119ea, and ST7319ea L. monocytogenes and vancomycin-resistant enterococci Simulated gastrointestinal tract Fugaban et al. ( 2021a ) Bacteriocin Producer Antiviral agents Target virus Model References Bacteriocin-like inhibitory substances Enterococcus faecium CM019 Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Vero-E6 cells Bahy et al. ( 2023 ) Labyrinthopeptin A1 Actinomadura namibiensis DSM 6313 Human immunodeficiency virus (HIV), Herpes simplex virus (HSV), dengue virus, and Zika virus In vitro Férir et al. ( 2014 ) Mundticin ST4SA E. mundtii ST4V HSV-1, HSV-2, Measles virus, and poliovirus In vitro Todorov et al. ( 2005 ) Subtilosin B. subtilis HSV-1 and HSV-2 In vitro Quintana et al. ( 2014 ) Subtilosin B. amyloliquefaciens HSV-1 In vitro Torres et al. ( 2013 ) Enterocin AAR-74 E. faecalis Coliphage HSA In vitro Qureshi et al. ( 2006 ) Enterocin B E. faecium L3 Influenza A virus subtype H3N2, H1N1 In vitro and mouse Ermolenko et al. ( 2019 ) Enterocin CRL35 E. faecium CRL3 HSV-1 and HSV-2 In vitro Wachsman et al. ( 2003 ) Enterocin CRL35 E. mundtii Herpesviruses Vero and BHK-21 cells Wachsman et al. ( 1999 ) Enterocin ST5Ha E. faecium ST5Ha HSV-1 In vitro Todorov et al. ( 2010 ) Enterocin AAR-71 E. faecalis Coliphage HSA In vitro Qureshi et al. ( 2006 ) Unnamed bacteriocins L. lactis subsp. Lactis and E. durans HSV-1 and poliovirus (PV-1) Vero cells Cavicchioli et al. ( 2018 ) Unnamed bacteriocins L. delbrueckii Influenza viruses (H7N7 and H7N1) In vitro Serkedjieva et al. ( 2000 ) Erwiniocin NA4 Erwinia carotovora NA4 Coliphage HSA In vitro Qureshi et al. ( 2006 ) Staphylococcin 188 S. aureus AB188 New castle disease virus (NCDV), poliovirus In vitro and in vivo Saeed et al. ( 2007 ) Erwinaocin NA4 E. carotovora NA4 Coliphage In vitro Dey et al. ( 2021 ) Bacteriocin Producer Anticancers Target cancer cell lines Model References Laterosporulin 10 B. laterosporus SKDU10 MCF-7, HEK293T, HT1080, HeLa and H1299 cells In vitro Baindara et al. ( 2017 ) Microcin E492 K. pneumoniae Human cell lines In vitro Hetz et al. ( 2002 ) Microcin E492 K. pneumoniae Human colorectal cancer cells In vivo SW480 and SW620 zebrafish xenograft Varas et al. ( 2020 ) Nisin L. lactis Human asterocytoma cell line (SW1088), head and neck squamous cell carcinoma (HNSCC) In vitro Joo et al. ( 2012 ), Zainodini et al. ( 2018 ) Nisin L. lactis Colon cancer cell line In vitro Ahmadi et al. ( 2017 ) Nisin A L. lactis Head and neck squamous cell carcinoma (HNSCC) In vitro Shin et al. ( 2016 ) Plantaricin P1053 L. plantarum PBS067 Cancerogenic epithelial intestinal cell lines In vitro De Giani et al. ( 2019 ) Plantaricin A L. plantarum C11 GH4, Reh, Jurkat, PC12, N2A In vitro Sand et al. ( 2013 ) Enterocin LNS18 Enterococcus thailandicus HepG2 cell lines In vitro Al-Madboly et al. ( 2020 ) Pediocin K2a2-3 P. acidilactici K2a2-3 Human colon adenocarcinoma (HT29) and human cervical carcinoma (HeLa) cells In vitro Villarante et al. ( 2011 ) Pediocin CP2 P. acidilactici CP2 MTCC501 HeLa, MCF-7, HepG2, murine myeloma (Sp2/0-Ag 14) In vitro Kumar ( 2012 ) Duramycin S. cinnamoneus AsPC-1, Caco-2, Colo320, CT116, JJN3, Lovo, MCF-7, (Rodrigues et al. 2019) MDA-B-231, MIA PaCa-2 In vitro Broughton et al. ( 2016 ) Pep27anal2 S. pneumoniae Jurkat, HL-60, AML-2, MCF-7, SNU-601 In vitro Lee et al. ( 2005 ), Sung et al. ( 2007 ) Bovicin HC5 S. bovis HC5 MCF-7, HepG2 mammalian cell lines In vitro Mantovani et al. ( 2002 ), Paiva et al. ( 2012 ) p28 Pseudomonas aeruginosa PAO1 MCF-7, HCT-116, UISO-MEL-23, MNE-MB-231, p53wt (Mel-29), U87, LN229 In vitro Yamada et al. ( 2009 ), Mehta et al. ( 2011 ) Pyocin S2 P. aeruginosa 42A HepG2, Im9, murine tumor (mKS-A TU-7), human fetal foreskin fibroblast (HFFF) In vitro Abdi-Ali et al. ( 2004 ) Colicin E3 E. coli P388, HeLa, HS913T In vitro Kohoutova et al. ( 2014 ) Sungsanpin Streptomyces spp. Human lung cancer cell line A549 In vitro Um et al. ( 2013 ) Chaxapeptin S. leeuwenhoekii C58 Human lung cancer cell line A549 In vitro Elsayed et al. ( 2015 ) Thiostrepton S. aureus Breast cancer cell lines, endometriosis Rat Kwok et al. ( 2008 ), Jin et al. ( 2019 ), Kongsema et al. ( 2019 ) Bacteriocin Producer Food preservation, safety, and quality Target microorganism Food/model References Colicins (GRN 676, GRN 593) E. coli E. coli , P. aeruginosa , Salmonella spp. Meat, fruits, and vegetables Hahn-Löbmann et al. ( 2019 ) Sakacin P L. sakei L. monocytogenes Beef and salmon Teneva-Angelova et al. ( 2018 ) Sakacin Lactobacillus sakei subsp. sakei 2a L. monocytogenes Cheese Martinez et al. ( 2015 ) Salmocins Salmonella spp. S. enterica Red meat Schneider et al. ( 2018 ) Divergicin M35 Carnobacterium divergens M35 L. monocytogenes Smoked fish Benabbou et al. ( 2020 ) Lactocin 705, Lactocin AL705 Lactobacillus curvatus CRL705 B. thermosphacta , L. innocua Vacuum-packed meat Castellano and Vignolo ( 2006 ) Lactoccin BZ Lactococus lactis L. innocua fresh beef Yıldırım et al. ( 2016 ) Enterocin K2B1 E. faecalis K2B1 Foodborne pathogens Dairy products Alang et al. ( 2020 ) Enterocin AS-48 Enterococcus faecalis Endogenous staphylococci Sardines Ananou et al. ( 2014 ) Enterocin LD3 and Plantaricin LD4 E. faecium LD3 and L. plantarum LD4 S. aureus subsp. aureus ATCC25923, Salmonella enterica subsp . enterica serovar Typhimurium ATCC13311, Proteus mirabilis ATCC43071, P. aeruginosa ATCC27853, and E. coli ATCC25922 In vitro Sheoran and Tiwari ( 2021 ) Aureocin A70 S. aureus A70 L. monocytogenes Dairy products Carlin Fagundes et al. ( 2016 ) Psicolin 126, carnocyclin A Carnobacterium maltoaromaticum L. monocytogenes Ready-to-eat meat products Liu et al. ( 2008 ) Variacin Kocuria varians NCC 1482 B. cereus Dairy food O’Mahony et al. ( 2001 ) Lacticin 481 L. lactis L3A21M1 L. monocytogenes Fresh cheese Ribeiro et al. ( 2016 ) Lacticin 3147 L. lactis subsp. lactis DPC3147 L. monocytogenes Cottage cheese and yogurt Morgan et al. ( 2001 ) Reuterin L. reuteri INIA PRO 137 L. monocytogenes and S. aureus skim milk Arqués et al. ( 2011 ) Gassericins A and T L. gasseri LA39 and LA158 B. cereus Custard cream Arakawa et al. ( 2009 ) Bovicin HC5 S. bovis HC5 Clostridium tyrobutyricum Mango pulp de Carvalho et al. ( 2007 ) Ent35-MccV E. coli BL21 E. coli and L. monocytogenes Skim milk Acuña et al. ( 2015 ) Bacteriocin GP1 L. rhamnosus GP1 Staphylococcus spp., Aeromonas spp., Lactobacillus spp., Pseudomonas spp., Vibrio spp. Fish Sarika et al. ( 2019 ) Bacteriocins ST3522BG and ST3633BG P. acidilactici ST3522BG and P. pentosaceus ST3633BG Listeria spp. Silage fermentation models system Fugaban et al. ( 2021b ) Bacteriocin BM1829 Companilactobacillus crustorum MN047 E. coli and S. aureus Beef Yan et al. ( 2021 ) Bacteriocin Sak-59 L. sakei B-RKM 0559 L. monocytogenes , S. aureus , and pathogenic strains of Serratia marcescens and E. coli Meat spoilage bacteria Abitayeva et al. ( 2021 ) Bacteriocins ST20Kc and ST41Kc E. faecium ST20Kc and ST41Kc L. monocytogenes and vancomycin-resistant enterococci Kimchi Valledor et al. ( 2022 ) Bacteriocin 32Y L. curvatus L. monocytogenes Pork and beef Gálvez et al. ( 2007 ) Bacteriocin RSQ04 L. lactis CGMCC20699 L. monocytogenes Model food system Xiang et al. ( 2022 ) Bacteriocin OS1 E. hirae OS1 Listeria spp. In vitro Siragusa ( 1992 ) Pyocin QDD1 P. aeruginosa QDD1 S. aureus and B. cereus In vitro Doshi et al. ( 2022 ) Nisin (Nisaplin ® ) L. lactis S. aureus Minas frescal cheese Felicio et al. ( 2015 ) Nisin Z L. lactis W8 Enterococcus italicus , E. mundtii , E. faecalis , B. thuringiensis , B. cereus , L. paracasei , Acinetobacter spp., Pseudomonas fluorescens and Enterobacter aerogenes Skim and whole-fat milk Mitra et al. ( 2011 ) Nisin Z and A and lacticin 481 L. lactis L. monocytogenes Cottage cheese Dal Bello et al. ( 2012 ) Nisin L. lactis N5764 S. aureus and L. monocytogenes Cow milk Alves et al. ( 2016 ) Micrococcin P1 S. equorum WS 2733 L. monocytogenes Soft cheese Carnio et al. ( 2000 ) AMA-K, Leucocin K7 L. plantarum AMA-K K. pneumoniae , Listeria spp., Enterococcus spp., E. coli Amasi (fermented milk product) Todorov ( 2008 ) Bacteriocin Producer Antimicrobial food packaging Target microorganism Food/model References Nisin L. lactis S. aureus , L. monocytogenes Cellulose films + minimally processed mangoes Barbosa et al. ( 2013 ) Nisin Z L. lactis subsp. lactis I8-7-3 Salmonella typhimurium , S. enteriditis , S. aureus , L. monocytogenes , E. coli Pullulan films + fresh and ready to eat muscle foods Pattanayaiying et al. ( 2015 ) Nisin L. lactis E. coli O157:H7, Salmonella spp. Stainless steel Phongphakdee and Nitisinprasert ( 2015 ) Nisin L. lactis Micrococcus luteus ATCC 10240 Ethylene- co -vinyl acetate (EVA) film (Scaffaro et al. 2011 ) Nisin L. lactis S. aureus and E. coli Poly(vinyl alcohol) films Hrabalikova et al. ( 2016 ) Nisin L. lactis E. coli O157:H7, Salmonella , and L. monocytogenes Fresh cut cantaloupe/rind Ukuku et al. ( 2015 ) Nisin L. lactis L. monocytogenes Starch/halloysite/nanocomposite films + soft cheese Meira et al. ( 2016 ) Nisin and lacticin 3147 L. lactis subsp. lactis HP L. lactis subsp. lactis , S. aureus , and L. innocua Polyamide and polyethylene pouches + cheese Scannell et al. ( 2000 ) Sakacin A L. sakei L. monocytogenes Polyethylene coated paper sheets + meat Barbiroli et al. ( 2017 ) Curvacin A L. sakei CRL1862 L. monocytogenes Stainless steel Polytetrafluoroethylene surfaces (PTFE) Pérez-Ibarreche et al. ( 2016 ) Lacticin L. lactis L. helveticus and Brochothrix thermosphacta Polyethylene based plastic film + meat Siragusa et al. ( 1999 ) Divergicin M35 Carnobacterium divergens M35 L. monocytogenes Chitosan film + smoked fish Benabbou et al. ( 2020 ) Bacteriocin 7293 Weissella hellenica BCC 729 Gram-positive and Gram-negative food borne pathogens PLA/SP biocomposite film + pangasius fish fillets Woraprayote et al. ( 2018 ) Plantaricin BM-1 L. plantarum BM-1 L. monocytogenes Polyethylene Zhang et al. ( 2017 ) Enterocin B3A-B3B E. faecalis B3A-B3B L. monocytogenes Stainless steel Al-Seraih et al. ( 2017 ) Pediocin P. acidilactici L. monocytogenes Plastic bags and cellulose casings + meat Ming et al. ( 1997 ) Bacteriocin Producer Antibiofilm and sanitizers Target microorganism/biofilm former Model References Gallidermin S. gallinarum S. aureus and S. epidermidis Medical implants Saising et al. ( 2012 ) Nisin L. lactis L. monocytogenes 4032 Stainless steel and polypropylen Saá Ibusquiza et al. ( 2011 ) Nisin, enterocin DD14, colistin combination L. lactis and E. faecalis 14 E. coli CIP54127 , E. coli 184 (mcr-1+), and E. col i (mcr-1) In vitro Al Atya et al. ( 2016a ) Lacticin 3147 L. lactis S. mutans In vitro oral biofilm model Corbin et al. ( 2011 ) Bacteriocins 4356 and 8014 L. acidophilus ATCC 4356 and L. plantarum ATCC 8014 Serratia marcescens In vitro Vahedi Shahandashti et al. ( 2016 ) Hyicin 4244 Staphylococcus hyicus 4244 14 Staphylococcus strains from human infections or bovine mastitis In vitro Duarte et al. ( 2018 ) Licheniocin 50.2 L. lactis subsp. lactis biovar. diacetylactis BGBU1-4 L. monocytogenes , coagulase-negative staphylococci In vitro Cirkovic et al. ( 2016 ) Sonorensin Bacillus sonorensis MT93 L. monocytogene s and S. aureus Polyethylene film coated meat and tomatoes Chopra et al. ( 2015 ) Enterocin AS-48 E. faecalis A-48-32 L. monocytogenes In vitro Caballero Gómez et al. ( 2013 ) Enterocin AS-48 with benzalkonium chloride, polyhexamethylene guanidium chloride and triclosan E. faecalis A-48-32 MRSA and MSSA In vitro Caballero Gómez et al. ( 2013 ) Enterocin AS-48 with biocides E. faecalis A-48-32 L. monocytogenes In vitro Gómez et al. ( 2012 ) Enterocin DD93, DD28 E. faecalis DD28 and E. faecalis DD93 MRSA In vitro, stainless steel, and glace devices Al Atya et al. ( 2016b ) Enterocin B3A-B3B E. faecalis B3A-B3B L. monocytogenes Stainless steel Al-Seraih et al. ( 2017 ) Unnamed bacteriocin L. fermentum 97 S. epidermidis , enterotoxigenic enterobacteria In vitro Rybalchenko et al. ( 2015 ) Unnamed bacteriocin Citrobacter freundii Citrobacter , K. pneumoniae , E. coli In vitro Shanks et al. ( 2012 ) Curvacin A L. sakei CRL1862 L. monocytogenes Stainless steel, polytetrafluoroethylene surfaces (PTFE) Pérez-Ibarreche et al. ( 2016 ) Bacteriocin Producer Aquaculture/aquatic product Target microorganism Application/model References CAMT2 Bacillus amyloliquefaciens ZJHD3-06 L. monocytogenes , S. aureus Epinephelus areolatus An et al. ( 2015 ) Coagulin L1208 B. coagulans L1208 E. coli , Shewanella putrefaciens , S. aureus Pseudosciaena croce Fu et al. ( 2018 ) Mundticin KS E. mundtii Tw56 P. aeruginosa , S. putrefaciens Odontesthes platensis Schelegueda et al. ( 2015 ) BacALP7 E. faecium L. monocytogenes Shellfish Pinto et al. ( 2009 ) Nisin Z L. lactis ssp. Lactis Streptococcus iniae Oxyeleotris lineolata Wright ( 2017 ) Nisin Z L. lactis TW34 L. garvieae Odontesthes platensis Sequeiros et al. ( 2015 ) Nisin L. lactis L. monocytogenes Litopenaeus vannamei Zhao et al. ( 2020 ) Plantaricin FGC-12 L. plantarum FGC-12 V. parahaemolyticus Golden carp Chen et al. ( 2019 ) Weissellicin 110 Weissella cibaria L. sakei JCM 1157 Plaa-Som, a Fermented Fish Product Srionnual et al. ( 2007 ) Enterocin MC13 E. faecium MC13 L. monocytogenes , V. parahaemolyticus , and V. vulnificus Mugil cephalus Satish Kumar et al. ( 2011 ) Pentocin JL-1 L. pentosus S. aureus Chiloscyllim punctatum Jiang et al. ( 2017 ) PE-ZYB1 P. Pentosaceus Zy-B L. monocytogenes Mimachlamys nobilis Zhang et al. ( 2020 ) Unnamed bacteriocin P. acidilactici L. monocytogenes Tilapia sp., Catla catla, Cyprinus carpio Sudarsanan and Thangappan ( 2017 ) Bacteriocin 7293 W. hellenica BCC 7293 L. monocytogenes , S. aureus , A. hydrophila , E. coli , P. aeruginosa , S. Typhimurium Pangasius bocourti Woraprayote et al. ( 2018 ) Bacteriocin KTH0-1S L. lactis KTH0-1S S. aureus Fermented shrimp Saelao et al. ( 2017 ) Bacteriocin PSY2 L. lactis strain PSY2 Spoilage Gram-positive and Gram-negative bacteria Perch Sarika et al. ( 2012 ) Bacteriocin CN-25 E. faecium CN-25 L. monocytogenes Fermented fish roe du Toit et al. ( 2000 ) Bacteriocin Producer Plant diseases Target phytopathogen Application/model References Gluconacin Gluconacetobacter diazotrophicus strain PAL5 Xanthomonas axonopodis pv . vasculorum , Acidovorax avenae subsp . avenae , Pseudomonas syringae pv . syringae , Xanthomonas vasicola pv . vasculorum In vitro Oliveira et al. ( 2018 ) Amylocyclicin B. amyloliquefaciens FZB42 Ralstonia solanacearum and X. campestris In vitro Scholz et al. ( 2014 ) Enterocin UNAD 046 E. faecalis Botryodiplodia theobromae , Aspergillus niger , Pythium ultimum , Penicillium expansum , and Fusarium oxysporum In vitro David and Onifade ( 2018 ) Putidacin L1 (PL1) Pseudomonas putida P. syringae In vitro Rooney et al. ( 2020 ) Tailocins Pseudomonas fluorescens SF4c X. vesicatoria Xcv Bv5-4a Tomato fruits Príncipe et al. ( 2018 ) Syringacin M Pseudomonas syringae pv. tomato DC3000 P. syringae Arabidopsis and tomato plants Li et al. ( 2020 ) Plantazolicin B. amyloliquefaciens subsp. Plantarum FZB42 B. anthracis and nematodes Plant roots Chowdhury et al. ( 2015 ) Carocin D P. carotovorum subsp. Carotovorum P. carotovorum subsp. Carotovorum In vitro Grinter et al. ( 2012 ) Kenyacin 404, Entomocin 420, Tolworthcin 524, Morricin 269, Kurstacin 287 B. thurigiensis F. oxysporum , Rhizopus sp., Mucor rouxi , Trichoderma spp . , A. nodulans , F. graminis , In vitro Salazar-Marroquín et al. ( 2016 ) BLIS RC-2 B. amyloliquefaciens RC-2 X. campestris pv. Campestris, C. dematium , R. necatrix , P. oryzae , A. tumefaciens In vitro Abriouel et al. ( 2011 ) Bacteriocin LlpA Pseudomonas sp. strain BW11M1 P. fluorescens Pf-5, P. tolaasii In vitro Parret et al. ( 2005 ) Unnamed bacteriocin B. gladioli Tatumella ptyseos In vitro and in planta Marín-Cevada et al. ( 2012 ) Unnamed bacteriocin P. syringae pv. Ciccaronei P. syringae subsp. Savastanoi In vitro and in planta Lavermicocca et al. ( 2002 ) BL8 B. thuringiensis subsp. Tochigiensis HD868 Cryphonectria parasitica , F. oxysporum , Penicillium digitatum , A. niger , A. fumigatus , A. flavus In vitro Subramanian and Smith ( 2015 )
Bacteriocins with potential applications
The microbiota is crucial and necessary for maintaining homeostasis, the host defense system, disease prevention, and overall health and well-being. The composition and diversity of the microbiota vary depending on localized regions (e.g., oral, nasal, respiratory, gut, and skin) and consist of highly diverse and complex communities with specialized autochthonous bacteria (Berg et al. 2020; Anjana 2022 ; Baquero et al. 2019 ; Zheng et al. 2023 ; Ormaasen et al. 2023 ; Reuben et al. 2023 ; Pérez-Cobas et al. 2023 ; Ferraz 2023 ). Dysbiosis of the microbiota often leads to physiological dysfunction, dysregulation, and diseases (Hou et al. 2022 ). Numerous studies have highlighted the indiscriminate impact of antibiotics on the microbiota, resulting in dysbiosis and perturbations of microbial composition and diversity that predispose the host to metabolic and immune system disorders (Francino 2015 ; Sanchez-Rodriguez et al. 2020 ; Hou et al. 2022 ). Unlike antibiotics, bacteriocins have a narrow spectrum of activity, are highly specific, and can inhibit pathogens without disrupting host-microbiota homeostasis or causing detrimental effects. Bacteriocins that can promote beneficial shifts in the abundance, composition, and diversity of the microbiota may provide sustainable and valuable microbiome-based solutions for the treatment of infectious and non-infectious microbiome-related diseases resulting from microbiota dysbiosis.
Furthermore, bacteriocin production by most bacteria can be seen as a strategy to modulate the microbiome (Pu et al. 2022 ; O’Reilly et al. 2023 ; Ríos Colombo et al. 2023 ; Rani and Tiwari 2023 ; Puls et al. 2024 ). Bacteriocins can either prevent invasion by allochthonous bacteria (competitors or pathogens) or stimulate the immune system to prevent oxidative stress and inflammation (Dahiya et al. 2017 ; Bäuerl et al. 2017 ; Heilbronner et al. 2021 ; Rani and Tiwari 2023 ; Puls et al. 2024 ). In another instance, bacteriocin-producing bacteria can invade and colonize communities predominantly populated by susceptible strains (Riley and Gordon 1999 ; Heilbronner et al. 2021 ). Bacterial interactions within the microbiota are characterized by both competition (antagonism) and cooperation (mutualism), which require a delicate balance for overall microbiota functioning and cohesion (Heilbronner et al. 2021 ; Pérez-Cobas et al. 2023 ). However, the mechanisms regulating the integration and modulation of bacteriocins in this complex multifactorial meshwork remain a black box.
Although the roles of bacteriocins in microbiome modulation and the maintenance of homeostasis and host health are limited, extensive metagenomic analysis substantially revealed the omnipresence of bacteriocin biosynthetic gene clusters across human microbiomes (Donia et al. 2014 ; Aleti et al. 2019 ; Naimi et al. 2022 ). In a study, several bacteriocins, including garvicin ML (GarML), plantaricins EF and JK (plantaricins), enterocins P, Q, and L50 (enterocins), pediocin PA-1 (PedPA-1), and sakacin A (SakA) were reported to beneficially modulate the gut microbiota in mice (Umu et al. 2016 ). While these bacteriocins differ greatly in terms of physicochemical properties and inhibition spectrum, their administration had a favorable impact on the microbiota, resulting in changes at the taxonomic level, increased abundance of LAB, and a decrease in Enterococcaceae, clostridia, and staphylococci. Recent studies showed that nisin, lacticin 3147, pediocin PA1, and bactofencin A separately modulated gut microbiota, resulting in subtle and beneficial alterations in pigs, Simplified Human Intestinal Microbiota (SIHUMI), and simulated colon models (Ríos Colombo et al. 2023 ; O’Reilly et al. 2023 ; Pu et al. 2022 ; Guinane et al. 2016 ). Bactofencin A increased the relative abundances of Bifidobacterium and Streptococcus while lowering the abundances of Blautia and Clostridium spp. (Arboleya et al. 2016 ; Sun et al. 2020 ). Bifidobacterium spp. are considered important microbes in healthy microbiota and are associated with probiotic properties. Mice fed with bacteriocin-producing L. salivarius UCC118 for eight weeks showed changes in gut microbiota compared to those fed with non-bacteriocin-producing variants (Murphy et al. 2013 ). Treatment with bacteriocin-producing L. salivarius UCC118 significantly increased Proteobacteria and Bacteroides while decreasing Actinobacteria. Similarly, the assessment of L. salivarius bacteriocin, bactofencin A, in a simulated gut microbiota system showed significant microbiota modulation in both the bactofencin A-producing strain and bactofencin A treatments compared with the non-bactofencin A producing mutant (Guinane et al. 2016 ). Bacteriocin production subtly changes the community structure of the gut microbiota at the taxonomic level, maintaining a beneficial and desirable microbiota (Guinane et al. 2016 ; Garcia-Gutierrez et al. 2019 ; O’Connor et al. 2020 ). In the same manner, Naimi et al. ( 2022 ) recently reported the subtle beneficial modulatory effect of Microcin J25 (MccJ25) or reuterin on the overall colon microbiota diversity and metabolome of swine.
Within the oral cavity, some strains of S. mutans produce bacteriocins called mutacins which modulate the oral microbiome by inhibiting phylogenetically related plaque-forming strains (Gillor et al. 2008 ). There is a positive correlation between the production of bacteriocins by S. mutans and their ability to colonize the oral cavity (Hillman et al. 1987 , 2000 ). S. salivarius K12, a commensal of the oral cavity often produces bacteriocins called salivaricins A and B. The presence of S. salivarius K12 which produces salivaricins A and B has been shown to modulate the oral and throat microbiomes, preventing the invasion of oral pathogens such as S. pyogenes and reducing throat infections (Brook 2005 ; Horz et al. 2007 ). Similarly, the consumption of milk containing a strain of S. salivarius 20P5, which produces salivaricin A, positively modulates the oral microbiota of children by significantly increasing the production and antagonistic activity of salivaricin A and providing immunity against S. pyogenes infection (Walls et al. 2003 ). Bacteriocin-producing Lactobacillus spp. including L. gasseri , L. crispatus , L. jensenii , and L. iners , are dominant in the vagina microbiota of healthy women (Vásquez et al. 2002 ; Pendharkar et al. 2023 ). In contrast, women with bacterial vaginosis have a distinct vaginal microbiota characterized predominantly by Mycoplasma hominis , Gardnerella vaginalis , Bacteroides , Mobiluncus , Peptostreptococcus , and Prevotella spp., along with lower densities of lactobacilli (O’Brien 2005 ; Falagas et al. 2007 ; Turovskiy et al. 2009 ). The vaginal microbiota is often modulated by bacteriocin-producing lactobacilli, which typically antagonize pathogens, especially G. vaginalis and Candida spp. (Kaewsrichan et al. 2006 ; Günther et al. 2022 ).
The skin microbiome consists of a highly diverse array of microorganisms involved in complex but balanced multifactorial interactions with the host and external environment (Carmona-Cruz et al. 2022 ; Nicholas-Haizelden et al. 2023 ; Glatthardt et al. 2024 ). Any imbalance (dysbiosis) in the structure and composition of the skin microbiota often results in skin infections/diseases such as acne, impetigo, atopic dermatitis, and psoriasis (Grice 2014 ; O’Sullivan et al. 2019 ; Carmona-Cruz et al. 2022 ; Richter and Wohlrab 2023 ; Sato et al. 2023 ; Puls et al. 2024 ). Bacteriocins have been used to selectively modulate and restore the skin microbial balance (eubiosis) in situations of dysbiosis caused by pathogen colonization and environmental perturbation (O’Sullivan et al. 2019 ; Ovchinnikov et al. 2020 ; Soltani et al. 2022b ; Alessandrini et al. 2023 ; Jaumaux et al. 2023 ). Lugdunin, a cyclic peptide bacteriocin facilitates the restoration of skin microbial balance while inhibiting different etiological agents of skin infections, especially MRSA and other Gram-positive bacteria (Bitschar et al. 2019 ; Krauss et al. 2020 ; Barber and Zhang 2021 ; Bier and Schittek 2021 ). Lugdunin is believed to exert microbiome modulatory activity by stimulating the expression of different cutaneous antimicrobial peptides and recruiting phagocytic neutrophils and monocytes (Bitschar et al. 2019 ; Krauss et al. 2020 ; Saur et al. 2021 ; Hirsch et al. 2024 ). Lugdunin also inhibits colonizing skin pathogens by disrupting the transmembrane pH gradient, which likely leads to protein denaturation and a reduction in proton motive force, obstructing cellular respiration (Krulwich et al. 2011 ; Farha et al. 2013 ; Barber and Zhang 2021 ). Similarly, two recently discovered bacteriocins, cerein B4080 and cerein 7B, reportedly enhance skin microbiome eubiosis by selectively promoting the growth of skin commensals while inhibiting pathogens (Jaumaux et al. 2023 ). By preserving skin commensals through competitive exclusion/inhibition of pathogens, bacteriocins could beneficially modulate the skin microbiome while limiting the emergence and spread of superbugs within the skin ecosystem, thereby reducing skin infections (Meade et al. 2020 ; Soltani et al. 2022b ; Jaumaux et al. 2023 ). Other bacteriocins that show high potential for application in skin microbiome modulation include garvicin KS, nisin Z, bactofencin A, pediocin PA-1, subtilosin, microcin J25, micrococcin P1, subtilin, bacteriocin A37, and reuterin (Joseph et al. 2013 ; O’Sullivan et al. 2019 ; Ovchinnikov et al. 2020 ; Heilbronner et al. 2021 ; Soltani et al. 2022b ; Alessandrini et al. 2023 ; Puls et al. 2024 ). There is a need to further explore the mechanisms of activity and pharmacological benefits of promising skin-relevant bacteriocins for their suitability in clinical application and commercialization.
Bacteriocins have also been used to modulate food microbiota to improve organoleptic properties, quality, and microbiological safety. The growing knowledge of the structure and function of food microbiota now influences their modulation towards desirable functions and beneficial outcomes. Food microbiota are often modulated through the regulation of abiotic factors or by using specific microorganisms and/or their products, such as bacteriocins (And and Hoover 2003 ; Walsh et al. 2023 ). The latter involves the use of various forms of bacteriocins, whether purified or semi-purified, and/or bacteriocin-producing strains to modulate food microbiota (O’Sullivan et al. 2003 ; Ramu et al. 2015 ; Silva et al. 2018 ). It has been demonstrated that the microbiota of fermented foods (e.g., cheese and kefir) can be modulated, making them useful models for shaping food microbiota (Wolfe et al. 2014 ; Bonham et al. 2017 ; Wolfe 2018 ; Blasche et al. 2021 ; Walsh et al. 2023 ). The application of bacteriocins or bacteriocin-producing strains as starter or protective cultures in dairy products can confer numerous advantages during food processing. They can modulate the food microbiota by accelerating ripening, as is the case with cheese (Ávila et al. 2005 ; Martinez et al. 2015 ), or reduce the growth of adventitious non-starter lactic acid bacteria (NSLAB) and other non-starter microbiota in fermented foods (Oumer et al. 2001 ; O’Sullivan et al. 2003 ), or inhibit invasion by environmental or spoilage organisms (Muñoz et al. 2004 , 2007 ), or significantly reduce the growth of foodborne pathogens (Carnio et al. 2000 ; Aspri et al. 2017 ; Kondrotiene et al. 2018 ), or accelerate enzyme release and activities (O’Sullivan et al. 2003 ), or enhance fermentation (Oumer et al. 2001 ). Additionally, bacteriocin production has been detected in LAB bacteria recovered from wine during malolactic fermentation, especially among L. plantarum strains (Navarro et al. 2000 ; Rojo-Bezares et al. 2008 ; Díez et al. 2012 ). During vinification, bacteriocin production could be an important characteristic to consider when selecting LAB as starters for malolactic fermentation. Furthermore, bacteriocins produced by LAB have significant potential for use as biocontrol agents against foodborne and spoilage organisms as well as biopreservatives throughout the enological processes (Díez et al. 2012 ; Dündar 2016 ; Fernández-Pérez et al. 2018 ).
The emergence and spread of infectious diseases, especially those caused by antimicrobial-resistant pathogens, and the increasing morbidity and mortality due to non-communicable diseases like diabetes and cancer pose major threats to global health (PAHO/WHO 2019 ; WHO 2021 ). Due to their high antimicrobial activity against a wide range of pathogens, safety, biocompatibility, unique mechanisms of action, biodegradability, high specificity, and nanomolar range, bacteriocins exert desirable heterogeneous traits relevant for medical application (Naveen and Kalaivani 2018 ; Meade et al. 2020 ; Le et al. 2021 , 2023 ; Reinseth et al. 2024 ; Rossi et al. 2024 ). The potential of bacteriocins in medicine has been demonstrated through various in vitro, ex vivo, and in vivo experiments, with some undergoing clinical evaluation. However, concerns have risen regarding solubility, stability, bioavailability, sensitivity to proteolytic enzymes, high cost, and the challenges of large-scale purification and production for general use, which often limit the direct use of bacteriocins in clinical studies and hinder their industrial production and commercialization (Böttger et al. 2017 ; Mathur et al. 2018 ; Hols et al. 2019 ; Soltani et al. 2021a ). Nevertheless, due to the unique and diverse medical potentials exhibited by bacteriocins, further investigations involving cutting-edge bioengineering techniques can be conducted to address these concerns and improve their properties and large-scale production for general medical use.
Since the discovery of antibiotics, they have played a significant role in the prevention and treatment of animal and human diseases. However, the emergence and increasing spread of multi- and extensive-drug-resistant superbugs necessitate the urgent use of novel, suitable, and sustainable strategies for infection control, treatment, and addressing AMR concerns. Bacteriocins show great promise as sustainable alternatives to currently available antibiotics. Numerous studies have described the unique mechanisms of action and potency of different bacteriocins against a broad range of superbugs (Bastos et al. 2009 , 2015 ; Svetoch et al. 2009 ; Ahmad et al. 2017 ; Goodarzi et al. 2020 ; Ovchinnikov et al. 2021 ; Benítez-Chao et al. 2021 ; Sharma et al. 2022 ; Soltani et al. 2022a; Barman et al. 2023 ; Ghapanvari et al. 2022 ; Bahy et al. 2023 ; Ibraheim et al. 2023 ; Wolden et al. 2023 ; Reinseth et al. 2024 ). Over the years, many studies have reported the antimicrobial properties of various bacteriocins against clinically important pathogens responsible for respiratory tract, nosocomial, dental, skin, and gastrointestinal tract infections. Bacteriocins have also been shown to have inhibitory effects on multidrug-resistant pathogens including C. difficile , vancomycin-resistant Enterococcus (VRE), methicillin-resistant S. aureus (MRSA), Klebsiella pneumoniae , Pseudomonas aeruginosa , Haemophilus influenza , Listeria spp., Salmonella spp., Enterobacter spp., Acinetobacter spp. and others (Oman and van der Donk 2009 ; Lay et al. 2016 ; Hanchi et al. 2017 ; Yu et al. 2019 ; Velázquez-Suárez et al. 2021 ; Ghapanvari et al. 2022 ; Bahy et al. 2023 ; Le et al. 2023 ; Alattar et al. 2024 ; Mu et al. 2024 ; Reinseth et al. 2024 ). Recently, Ying et al. ( 2024 ) and Wolden et al. ( 2023 ) separately identified novel bacteriocins, bacteriocin XJS01 and romsacin (produced by Lactobacillus salivarius and Staphylococcus haemolyticus ) which showed broad-spectrum activity against Gram-positive World Health Organization (WHO) priority pathogens such as VRE ( E. faecium ) and MRSA. Additionally, romsacin also eradicated the biofilms of VRE, MRSA, Staphylococcus epidermidis , and S. haemolyticus .
Nosocomial infections are mostly caused by MDR E . coli , enterococci, P. aeruginosa , Acinetobacter baumannii , K. pneumoniae , pneumococci, S. aureus , and Proteus spp. (Ghodhbane et al. 2015 ; Khan et al. 2017 ; Le et al. 2021 ; Rossi et al. 2024 ). Lacticin 3147, klebicin, and nisin A have shown high inhibitory activity against multiple nosocomial pathogens including MRSA and VRE (Piper et al. 2009 ; Ahmad et al. 2017 ; Alattar et al. 2024 ; Zhao et al. 2024 ). These bacteriocins also exhibit significant antagonism against pathogens in the kidney, liver, and spleen. In an in vivo study involving S. aureus Xen 29 infected mice, subcutaneous treatment with lacticin 3147 prevented the systemic spread of the pathogen, indicating the potential of lacticin 3147 as a biotherapeutic in real-life applications (Piper et al. 2009 ). Pumilicin 4, a bacteriocin produced by Bacillus pumilus , has shown remarkable inhibitory activity against MRSA, VRE, and several Gram-positive bacteria (Aunpad and Na-Bangchang 2007 ). This demonstrates the potential of the use of Pumilicin 4 in the management of infections caused by MRSA, VRE, and other susceptible Gram-positive pathogenic bacteria. Similarly, planosporicin, a bacteriocin produced by Planomonospora spp. DSM14920, has shown activity against S. pyogenes , S. pneumoniae , and S. aureus (Aunpad and Na-Bangchang 2007 ). Jabés et al. ( 2011 ) and Mota-Meira et al. ( 2005 ) separately demonstrated high in vitro and in vivo inhibitory activities of bacteriocins NAI-107, mutacin B-Ny266, and microbisporicin against MDR pathogens. Additionally, the activity of microcin J25, a bacteriocin produced by E. coli against multidrug-resistant Enterobacteriaceae has also been reported (Telhig et al. 2022 ).
The growth of major pathogenic bacteria including H. influenzae , Pasteurella multocida , Mycobacterium tuberculosis , P. aeruginosa , or Moraxella catarrhalis , responsible for various respiratory tract infections (RTIs) such as rhinitis, pneumonia, otitis, and tuberculosis were reportedly inhibited by different bacteriocins (mutacin B-Ny266, bacteriocin L23, lantibiotic MU1140, nisin F, and Mersacidin) under in vivo conditions in mice and Wistar Rats models and in vitro models (Kruszewska et al. 2004 ; Mota-Meira et al. 2005 ; Pascual et al. 2008 ; De Kwaadsteniet et al. 2009 ; Ghobrial et al. 2009 ; Le et al. 2023 ; Martin et al. 2023 ; Zhao et al. 2024 ). The activities of these bacteriocins under varied in vivo conditions, including immunosuppression, were observed to have no toxicity to the bronchi, trachea, lungs, or haematology of the evaluated animals. Similarly, purified salivaricin D and mutacin 1140 have shown antagonism against known RTI pathogens, P. aeruginosa , S. aureus , and S. pneumoniae (Ghobrial et al. 2009 ; Birri et al. 2012 ). Multiple in vitro and in vivo (mice and macrophages) anti-tubercular activities of various bacteriocins (e.g. lacticin 3147, nisin, laterosporulin10, and enterocin AS-48) have been tested against different strains of M. tuberculosis with favorable outcomes (Sosunov et al. 2007 ; de Kwaadsteniet et al. 2010 ; Carroll et al. 2010 ; Aguilar-Pérez et al. 2018 ) . Furthermore, variants of bioengineered nisin S, T, and V tested against M. tuberculosis (H37Ra), M. avium subsp. Paratuberculosis (ATCC 19698), M. avium subsp. Hominissuis (CIT05/03), and M. kansasii (CIT11/06) showed more significant inhibitory activities compared to parent nisin (Carroll et al. 2010 ). Among the bioengineered nisin variants, nisin S showed the most potent antagonism. Latham et al. ( 2017 ) also reported narrow-spectrum activity against nontypeable Haemophilus influenzae (NTHi) by a novel bacteriocin produced by Haemophilus haemolyticus . Their findings suggest that the novel bacteriocin or bacteriocinogenic strains of H. haemolyticus have the potential to reduce NTHi colonization and respiratory tract infection caused by NTHi.
Topical evaluation of bacteriocins has successfully been reported against oral and skin diseases, and breastfeeding women with mastitis (Fernández et al. 2008 ; Kang et al. 2009 ; Tong et al. 2014 ). Etiological agents of these diseases especially Propionibacterium acnes , P. aeruginosa , S. aureus , S. epidermidis , L. monocytogene s, B. subtilis , and B. cereus were controlled using bacteriocins such as nisin, lactocyclicin Q, subpeptin JM4B and hiracin JM79 (Sánchez et al. 2007 ; Kang et al. 2009 ; Sawa et al. 2009 ; Izquierdo et al. 2009 ; Ovchinnikov et al. 2020 ; Barman et al. 2023 ). Similarly, bacteriocins or bacteriocin-based formulas have been topically used for the treatment and prevention of mastitis and intramammary infections in animals Bennett et al. 2021 ; 2022 ; Heinzinger et al. 2023 ; Raheel et al. 2023 ). Several studies have reported the potency of different bacteriocins against pathogenic bacteria responsible for dental infections, vaginosis, gastric ulcers, gastroenteritis, etc. (Howell et al. 1993 ; Dover et al. 2007 ; Miyauchi et al. 2012 ; Kaewnopparat et al. 2013 ; van Staden et al. 2016 ; Cebrián et al. 2019 ; Ovchinnikov et al. 2020 , 2021 ; Goodarzi et al. 2020 ; Benítez-Chao et al. 2021 ; Sharma et al. 2022 ; Barman et al. 2023 ; Alessandrini et al. 2023 ).
Apart from antibacterial properties exhibited by bacteriocins, several bacteriocins also possess antiviral activities against different viruses. While working with bacteriocins produced by E. faecium CRL35, (Wachsman et al. 1999 ) first described the antiviral activity of enterocin CRL35 against Herpes simplex viruses (HSV-1 and HSV-2). Enterocin CRL35 interferes with intracellular viral multiplication and inhibits viral late stages of replication (Wachsman et al. 2003 ; Al Kassaa et al. 2014 ). Similarly, enterocin ST4V and enterocin ST5Ha produced by E. mundtii ST4V and E. faecium ST5Ha, respectively, have shown high potency against HSV-1 and HSV-2 (Wachsman et al. 2003 ; Todorov et al. 2005 ). Bacteriocins produced by L. curvatus and L. delbrueckii subsp. Bulgaricus have shown antiviral properties against murine norovirus (MNV) and influenza virus (H1N1) (Serkedjieva et al. 2000 ; Lange-Starke et al. 2014 ). Non-LAB bacteriocins including Subtilosin A, erwiniocin NA4, and staphylococcin 188 produced by B. subtilis , E. carotovora NA4, and S. aureus AB188 independently showed inhibitory activities against HSV-1 (Torres et al. 2013 ), influenza, Newcastle disease, and coliphage HSA viruses (Qureshi et al. 2006 ; Saeed et al. 2007 ), respectively. Likewise, Actinomadura namibiensis DSM 6313 secretes bacteriocin, Labyrinthopeptin A1 (LabyA1) with antiviral activity against HSV and human immunodeficiency virus type 1 (HIV-1) (Férir et al. 2013 ). LabyA1 inhibited intracellular transmission of HIV-1 between infected and noninfected CD4 + T cells. Lee et al. ( 2016 ) similarly demonstrated the antiviral inhibitory activity of Micrococcin P1. In their study, they reported that Micrococcin P1, a naturally occurring macrocyclic peptide efficiently inhibited the attachment, entry, and cell-to-cell transmission of all hepatitis C virus (HCV) genotypes.
In a recent study, bacteriocin-like inhibitory substances produced by E . faecium CM019 isolated from Egyptian dairy products showed broad-spectrum antimicrobial activity against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and several Gram-positive bacteria activity (Bahy et al. 2023 ). Generally, the antiviral mechanisms and pharmacodynamics of bacteriocins against viruses are yet to be fully elucidated. However, it is believed that bacteriocins interfere with viral key determinants responsible for viral replication (Wachsman et al. 2003 ). Further studies are required to decipher the mechanisms of action and pharmacodynamics of bacteriocins against different viruses, especially those emerging with high virulence.
Emerging reports show the great potential of bacteriocins as valuable tools for bioanalytical purposes in medicine, largely due to their precision, specificity, and in vivo recognition in biological systems. Different studies have demonstrated the labeling of bacteriocins using specific organic probes, fluorescent, or radioactive markers (Imran et al. 2013 ; Deng et al. 2020 ; Escobar et al. 2023 ). Through visualization with fluorescence ratio imaging microscopy, a labeled bacteriocin, fluorescent nisin Z, was able to precisely detect three pathogenic listerial strains: L. monocytogenes CIP 82110, L. ivanovii CIP 12510, and L. innocua CIP 12511 (Imran et al. 2013 ). Additionally, the mechanism of antilisterial action using the labeled nisin was demonstrated. Technetium-99 m ( 99m Tc)–duramycin a bacteriocin which is known to have high specificity and affinity towards phosphatidylethanolamine was used to identify apoptotic and necrotic cells (Ahmad et al. 2017 ). The combinatorial use of sodium iodide symporter (NIS) and 99m Tc-duramycin single-photon emission computed tomography (SPECT) imaging has proven effective in monitoring the spread of oncolytic virotherapy (OV) and determining the absence or presence of therapeutic-associated cell death (Zhang et al. 2019 ).
Recent advances in bacteriocin and peptide-based diagnosis, detection, and monitoring of pathogens have been increasingly developed for application in clinical and food systems with remarkable success. Various bacteriocins such as warnericin RK, leucocin, leucocin A, pediocin PA1, and curvacin A, have been used for the detection and monitoring of pathogens including bacteria and viruses, in clinical settings and the food system (Etayash et al. 2014a , b ; Azmi et al. 2015 ; Islam et al. 2021 , 2022 ; Escobar et al. 2023 ). These advances show the potential application of bacteriocins not only as noninvasive diagnostic tools for the diagnosis and prognosis of both infectious and non-infectious diseases but also for the identification of individuals predisposed to chronic diseases or secondary infections. Additionally, the use of peptide-based biosensors could offer promising, rapid, and highly sensitive alternatives for pathogen detection and food monitoring in agrifood systems.
Globally, cancer remains one of the most severe, life-threatening, and difficult-to-treat diseases, resulting from the spread of uncontrollable proliferation of cells. The use of conventional cancer treatments, especially chemotherapy, radiotherapy, and surgery, often results in more devastating side effects and is still unable to curb the rising cases of cancer-associated morbidity and mortality (Naveen and Kalaivani 2018 ; Meade et al. 2020 ). A paradigm shift in cancer treatment approaches, including the use of innovative, safe, and sustainable solutions with no severe side effects is imperative. Interestingly, several bacteriocins have demonstrated varying degrees of anticancer activity (Hoskin and Ramamoorthy 2008 ; Kaur and Kaur 2015 ; Baindara et al. 2018 ; Meade et al. 2020 ). Due to the differences between the membranes of cancerous and healthy cells, bacteriocins can identify and selectively destroy cancer cells (Meade et al. 2020 ). Unlike healthy cells, which have outer membranes with neutral charged ions, the outer membrane of cancer cells upregulates the expressions of O-glycosylated mucins and phosphatidylserine (Yoon et al. 1996 ; Dobrzyńska et al. 2005 ) and becomes negatively charged. The negatively charged cell membranes of cancer cells trigger electrostatic interactions in the presence of [positively charged] bacteriocins (Hammami et al. 2010 ; Baindara et al. 2018 ; Meade et al. 2020 ; Ananou et al. 2020 ). The inhibitory activity of bacteriocins against cancer cells is primarily based on membrane permeabilization, which is mainly due to the amphiphilic and cationic nature of bacteriocins (Kaur and Kaur 2015 ; Perez et al. 2018 ). Ahmadi et al. ( 2017 ) reported antiproliferative activity of nisin against colon cancer SW480 cells. Nisin ZP induced anticancer activity, resulting in a high level of apoptosis in squamous cell carcinoma (HNSCC cells) with no histological damage, necrosis, fibrosis, or inflammation even after prolonged exposure to nisin ZP (Kamarajan et al. 2015 ). Similarly, nisin has shown activity in the control of oral cancer as well as in head and neck squamous cell carcinoma in in vivo mice studies (Lopetuso et al. 2019 ). Purified colicin, microcin, pediocin, and pyocin have also demonstrated high inhibitory activities in xenograft mouse models and neoplastic cell lines (Shin et al. 2016 ). Microcin E492, produced by K. pneumoniae , exhibits anticancer properties against breast and colorectal cancer cells through the induction of apoptosis and necrosis in some human cell lines (Hetz et al. 2002 ).
In recent years, several bacteriocins, including Laterosporulin10, Enterocin 12a, nisin A, Fermenticin HV6b, colicins, and Enterocin LNS18, have shown anticancer properties against various types of cancers in different cancer cell models (Baindara et al. 2017 ; Norouzi et al. 2018 ; Al-Madboly et al. 2020 ; Hosseini et al. 2020 ; Soleimanpour et al. 2020 ; Sharma et al. 2021 ; Balcik-Ercin and Sever 2022 ; Molujin et al. 2022 ; Ye et al. 2023 ). These bacteriocins often exhibit anticancer activities against human cell lines or in vivo, with minimal activity towards non-cancerous cells. Several studies have confirmed the anticancer potential of bacteriocins. However, more in vivo studies are necessary to fully elucidate and validate the clinical potency of bacteriocins as anticancer therapeutic agents.
The application of bacteriocins in the food system has been extensively studied since their discovery. Bacteriocins are naturally synthesized and ready-to-use, without color, taste, odor, or impact on the sensory properties of food. They also demonstrate stability at high temperatures and low pH, making them increasingly important in the food sector (Perez et al. 2014 ; Abbasiliasi et al. 2017 ; Yang et al. 2018 ; Sanguyo et al. 2021 ; Shafique et al. 2022 ; Field et al. 2023 ; Yu et al. 2023 ). The suitability of bacteriocins for extensive application in the food system leverages several beneficial aspects of food production. Bacteriocins are able to (a) decrease the risk of transmission of foodborne or zoonotic pathogens and food poisoning, (b) improve the shelf life of food, (c) decrease economic losses due to disease outbreaks, food spoilage, and recalls, (d) preserve the nutritional value of food through the reduction of the intensity of physical treatments, (e) decrease processing costs and time, (f) provide a safe and sustainable alternative preservation approach for ready-to-eat and "novel” food, and (g) provide extra protection during temperature abuse episodes (Gálvez et al. 2007 ; Hu et al. 2014 ; Darbandi et al. 2022 ). While various aspects of bacteriocin applications within the food system, including food preservation, fermentation, and protective culture, have been extensively reviewed (Deegan et al. 2006 ; Zacharof and Lovitt 2012 ; Perez et al. 2014 ; Bali et al. 2016 ; Ahmad et al. 2017 ; Lopetuso et al. 2019 ), we provide additional updates on the emerging and relevant potential of bacteriocin use in the food system.
Despite the application of advanced technologies in the food industry, excessive economic loss as a result of microbial contamination and spoilage continue to constitute a major challenge globally. The application of antimicrobial agents, including bacteriocins, in antimicrobial packaging is specifically suitable for mitigating the risk of microbial contamination. The use of bacteriocin-coated packaging films to inhibit and control food spoilage has attracted considerable attention the recent years. These bacteriocins can either be directly coated onto the packaging film surface or incorporated into the matrix of the packaging film (Woraprayote et al. 2016 ; Ahmad et al. 2017 ; Benabbou et al. 2020 ). However, it is important to understand both the physicochemical properties and the mechanism(s) of action of the selected bacteriocin(s) for such use (O’Connor et al. 2015 ). Active bacteriocin coating serves to protect food products by continuously interacting with the packaged food and modifying the internal environmental conditions within the required shelf life (Gumienna and Górna 2021 ). In most instances, bacteriocins improve food quality by maintaining microbiological safety, improving nutritional and sensory properties, and extending shelf life (Santos et al. 2018 ; Mousavi Khaneghah et al. 2018 ; Sanguyo et al. 2021 ; Shafique et al. 2022 ; Yu et al. 2023 ). Food packaging films or polymers incorporated with bacteriocins directly inhibit the growth of microorganisms on the food surface, where most of the microbial food spoilage or contamination occurs (Ahmad et al. 2017 ; Gumienna and Górna 2021 ; Rivera-Hernández et al. 2021 ). Interestingly, most bacteriocins retain their antimicrobial activity during food processing. Their viability is not impacted by changes in temperature, sterilization, pasteurization, or other processing techniques (Santos et al. 2018 ; Gumienna and Górna 2021 ). The growing consumer demand for safe, natural, and chemical-free food has enabled food industries to explore the use of bacteriocins in food packaging, among other applications. Active bacteriocin-coated materials are highly promising sustainable solutions to enhance food safety and shelf life while retarding food contamination and spoilage.
For example, a polyethylene-based packaging film infused with plantaricin BM-1 produced by L. plantarum BM-1 showed antilisterial activity against L. monocytogenes for at least 120 days at room temperature (Zhang et al. 2017 ). Woraprayote et al. ( 2018 ) also demonstrated the inhibitory activity of Weissella hellenica -produced bacteriocin 7293 impregnated onto a biocomposite film (PLA/SP) with pangasius fish fillets against various foodborne pathogens, including A. hydrophila , S. aureus , L. monocytogenes , P. aeruginosa , and S. typhimurium. The adsorption of nisin on a wide variety of packaging films with antimicrobial activities has been successfully reported on polypropylene, ethylene vinyl acetate, polyethylene, polyvinyl chloride, acrylics, polyamide, and polyester. Nisin-incorporated coatings for poultry products have also been documented (Appendini and Hotchkiss 2002 ; Scaffaro et al. 2011 ; Tumbarski et al. 2018 ). Polyamide and polyethylene pouches coated with nisin preparation (Nisaplin ® ) and lacticin 3147 significantly reduced L. lactis subsp. lactis , S. aureus , and L. innocua during the storage of vacuum-packed cheese (Scannell et al. 2000 ). Pediocin coated on plastic bags and cellulose casings completely inhibited L. monocytogenes in meats during 3 months of storage at refrigeration temperature (Ming et al. 1997 ). Benabbou et al. ( 2020 ) also reported the antimicrobial properties of biocompatible and biodegradable chitosan films incorporated with divergicin M35 for the biocontrol of Listeria spp. in foods, especially minimally processed products, and ready-to-eat food. The success observed in these studies highlights the potential of bacteriocins in antimicrobial packaging by effectively inhibiting or limiting the growth of spoilage and pathogenic microorganisms in packaged food.
Microorganisms mostly exist as sessile communities, known as biofilms, enclosed in an extracellular matrix typically composed of extracellular DNA, lipids, polysaccharides, etc. (Flemming et al. 2016 ). Biofilm formation by microorganisms in the food system makes them resistant to antimicrobials and difficult to remove from food production facilities, surfaces, and environments (Mathur et al. 2018 ). Many biofilm-forming species in the food industry are known human pathogens that can cause metal corrosion, changes in organoleptic properties of food, and disease (Colagiorgi et al. 2017 ; Kirtonia et al. 2021 ). Biofilms are commonly found on surfaces such as tanks, pipelines, glass, polyethylene, polypropylene, rubber, packaging tools, and wood (Kirtonia et al. 2021 ). Recently, the use of bacteriocins as antibiofilm agents in the food industry has been widely reported (Mathur et al. 2018 ; Kirtonia et al. 2021 ; Jiang et al. 2022 ; Zhang et al. 2022a , b ). In a study by Bolocan et al. ( 2017 ), several bacteriocins including, subtilomycin, nisin Z, and lichenicidin demonstrated high antibiofilm activity against L. monocytogenes biofilms. These bacteriocins also significantly decreased the viability of already formed biofilms. Another study showed that nisin at the concentration of 4000 IU/ml reduced biofilm formation by 87, 57, and 30% for Salmonella Enteriditis, L. monocytogenes , and S. aureus , respectively (Mahdavi et al. 2007 ). Bacteriocin sonorensin exhibited inhibitory activity against S. aureus biofilms (Chopra et al. 2015 ). From their study, the inhibitory property of sonorensin was attributed to increased membrane permeability in S. aureus . Biofilms formed by fourteen Staphylococcus strains were inhibited by hyicin 4244, a circular sactibiotic secreted by S. hyicus 4244 (Duarte et al. 2018 ). Hyicin 4244 decreased biofilm-forming ability, number of cells, cellular viability, and proliferation of sessile cells within already formed biofilm.
While the combination of nisin with enterocin B3A-B3B resulted in a 2-log decrease in L. monocytogenes biofilms on the surface of stainless steel within 24 h, nisin mixed with ethanol however resulted in a 5-log reduction of Salmonella and E. coli biofilms on stainless steel surfaces within 15 min (Phongphakdee and Nitisinprasert 2015 ; Al-Seraih et al. 2017 ). Industrial application of bacteriocins as antibiofilm agents or sanitizers may require a longer period to achieve significant bacterial reduction. However, bacteriocin combination with other antimicrobials can result in rapid bacterial reduction and biofilms clearance. Further studies are needed to explore the potential of bacteriocins as antibiofilm agents in the food industry, focusing on unraveling their mechanism of action and spectrum of activity.
Antibiotics have been routinely used in agriculture, either for treating or preventing animal diseases or as growth promoters. This practice has significantly contributed to the increased emergence and spread of antimicrobial-resistant pathogens from animals to humans (Ben Lagha et al. 2017 ). To address the issue of AMR in animal production, many countries have prohibited antibiotic use as growth promoters in animal production (European Commission 2005 ; AccessScience Editors 2017 ; Prescott 2019 ; Field et al. 2023 ; WOAH 2023 ). Therefore, the application of bacteriocins and/or bacteriocin-producing strains as growth promoters, prophylaxis, or therapeutics in agriculture has been considered viable and sustainable alternatives to antibiotics.
Dairy animals often suffer from mastitis, which is an inflammation of the mammary gland resulting in considerable economic losses due to reduced milk quantity and quality. Mastitis is predominantly caused by S. aureus , S. dysgalactiae , S. uberis , Mycoplasma spp., and E. coli (Cheng and Han 2020 ). Several bacteriocins, including lacticin 3147 and nisin, have been shown to inhibit the etiological agents of mastitis, especially S. agalactiae and S. aureus in dairy cattle (Cao et al. 2007 ; Pieterse et al. 2010b ; Klostermann et al. 2010 ; Field et al. 2021 ; Bennett et al. 2021 ; 2022 ; Heinzinger et al. 2023 ; Raheel et al. 2023 ). The United States FDA has approved the general use of a nisin-based preparation, Wipe Out ® Dairy Wipes (Immucell, Portland, ME, USA), for mastitis control in lactating dairy cows. Klostermann et al. ( 2010 ) demonstrated the efficacy of lacticin 3147 in eliminating mastitis-causing S. uberis , S. dysgalactiae , and S. aureus after a 10-min teat dip treatment. Other bacteriocins, such as aureocins A70, A53, epilancin K7, entomocin, Pep5, kurstacin 287, bacteriocin ST91KM, uberolysin, nisin U, kenyacin 404, and epidermin, have shown anti-mastitis effects against S. aureus and S. agalactiae (Barboza-Corona et al. 2009 ; Pieterse et al. 2010a ; Salvucci et al. 2012 ).
Microcin J25 has been used for Salmonella control in poultry (Stavric and D’Aoust 1993 ; Ben Said et al. 2020 ; Baquero et al. 2024 ). Divercin AS7, a bacteriocin produced by Carnobacterium divergens AS7 has been effective in controlling S. enterica Typhimurium, Campylobacter spp., and C. perfringens in both poultry and swine (Gillor et al. 2004 ; Stern et al. 2005 ; Udompijitkul et al. 2012 ). Our recent studies have demonstrated the antagonistic and pathogen-reducing activity of plantaricin EF producing- L. plantarum , alone and in combination with other potential probiotic strains against enterobacteria in poultry (Reuben et al. 2022 ) as well as other zoonotic pathogens such as Salmonella Typhimurium, S. Enteritidis, E. coli O157: H7, E. faecalis , and L. monocytogenes (Reuben et al. 2020 ). In another study involving boilers challenged with Pasteurella multocida , we found that dietary supplementation with novel multistrain probiotics containing plantaricin EF-producing L. plantarum attenuated mortality, clinical manifestations, and inflammatory reactions associated with P. multocida -induced fowl cholera (Reuben et al. 2021 ). Furthermore, the abundance of gut enterobacteria and P. multocida was also significantly reduced in birds supplemented with the multistrain probiotics containing plantaricin EF-producing L. plantarum. Similarly, the therapeutic potential of bacteriocin and a strain of bacteriocin producing L. plantarum was investigated on broilers experimentally infected with E. coli (Ogunbanwo et al. 2004 ). Treatment with bacteriocin or the producing L. plantarum strain reduced E. coli -associated infections and improved the overall health and well-being of the birds.
The prohibition of antibiotic use as growth promoters in animal production has created a void that must be filled with equally potent, safe, and sustainable alternatives. Bacteriocins and their producing strains have emerged as widely accepted and suitable growth promoters in animal production. Several studies have demonstrated the growth promotion effects of bacteriocins and bacteriocin-producing strains in various animal species including poultry, cattle, and swine (Gillor et al. 2004 ; Cutler et al. 2007 ; McAllister et al. 2011 ; Józefiak et al. 2013 ; Reuben et al. 2021 , 2022 ; Soltani et al. 2022a ; Zhang et al. 2022a , b ; Field et al. 2023 ).
The dietary supplementation with colicin E1 improved growth performance and significantly reduced F18-positive enterotoxigenic E. coli -associated postweaning diarrhea in piglets (Cutler et al. 2007 ). Supplementation with L. salivarius Bacteriocin Abp118 induced intestinal microbiota modulation, leading to increased growth performance and feed conversion efficiency in pigs (Riboulet-Bisson et al. 2012 ). Grilli et al. ( 2009 ) observed improved growth performance in C. perfringens infected broiler chickens supplemented with pediocin A alone or in combination with the producing strain. Similarly, the inclusion of nisin in the diet of broiler chickens beneficially modulated gut microbiota and significantly enhanced feed conversion and growth performance (Józefiak et al. 2013 ). Supplementation with plantaricin EF-producing L. plantarum , alone or in combination with other probiotic strains including E. faecium C14 and P. pentosaceus I13, improved haemato‐biochemical parameters, intestinal health, and growth in broilers (Reuben et al. 2022 ). Dietary supplementation of broiler feed with bacteriocin microcin J25 significantly improved performance, intestinal microbiota composition, and diversity, while reducing systemic inflammatory markers and levels of faecal E. coli and Salmonella (Wang et al. 2020b ). These studies demonstrate the potential of bacteriocins or bacteriocinogenic strains as viable alternatives to antibiotics for growth promotion in animals.
The aquaculture supply chain is continuously exposed to multiple physical, chemical, and biological hazards, especially a wide range of pathogenic organisms. This impacts the quality and safety of aquaculture and its products. Minimizing microbiological hazards often involves the use of antibiotics, which enhances the selective pressure for the emergence and spread of superbugs and drug residues in both aquaculture products and their environment (Gillor et al. 2008 ; Wang et al. 2019a ; Stentiford et al. 2022 ). However, in recent years, substantial attention has been given to the use of bacteriocins in aquaculture mostly for aquaculture processing and disease mitigation, improvement of water quality, and enhancement of sensory quality and shelf life (Wang et al. 2019a ). Bacteriocin cloning and heterogeneous expressions from producing strains have demonstrated great potential in designing robust microbial cell factories capable of producing potent bacteriocins (Xu et al. 2019 ; Feito et al. 2023 ). Through this advancement, Feito et al. ( 2022 ) and Contente et al. ( 2023 ) engineered a recombinant multi-bacteriocinogenic strain ( L. cremoris WA2-67) to produce three bacteriocins: garvicin A, Q, and nisin Z. The three recombinant bacteriocins, especially nisin Z, beneficially enhanced immune functions and growth performance while inhibiting pathogen colonization in rainbow trout ( Oncorhynchus mykiss , Walbaum) (Contente et al. 2023 ). Bacteriocin-like substances (BLS) obtained by co-cultures of E. faecium MU8 with Aeromonas veronii showed significant antimicrobial activity against major pathogens of Nile tilapia , including Aeromonas jandaei and A. veronii (Promrug et al. 2023 ). Bacteriocin production through co-cultures of Gram-negative-inducing strains with Gram-positive bacteriocin-producing strains is now used to increase bacteriocin biosynthesis and yields (Liu et al. 2021 ; Promrug et al. 2023 ).
Bacteriocins such as enteromycin F4-9 and MC13, produced from E. faecalis F4-9 and E. faecium MC13 respectively, have shown broad inhibitory activity against both Gram-negative and Gram-positive bacterial pathogens of aquatic animals, including E. coli JM109, A. hydrophila , Vibrio harveyi , and V. parahaemolyticus (Pinto et al. 2009 ). Bacteriocin produced by A. media strain A199 has controlled V. tubiashii -infected Pacific oyster larvae (Gibson et al. 1998) and significantly reduced mortality due to saprolegniosis in eels (Lategan and Gibson 2003 ). The dietary inclusion of bacteriocin NPUST1 produced by Paenibacillus ehimensis NPUST1 reduced the counts of S. iniae and A. hydrophila and improved the growth performance of Oreochromis niloticus (Nile tilapia) (Chen et al. 2019 ). Plantaricin FGC-12 applied to Whiteleg shrimp ( Penaeus vannamei ) inhibited V. parahaemolyticus by causing cell wall perforation (Hu et al. 2013 ).
Furthermore, bacteriocin-like substances obtained from LAB associated with the gut of Mugil cephalus L (grey mullet) improved water quality, inhibited the growth of L. garvieae and reduced microbial-associated morbidity and mortality in aquatic animals (Lin et al. 2013 ). In addition to their pathogen inhibitory properties, bacteriocins also improve the sensory properties and shelf life of aquatic products (Cortesi et al. 2009 ; Alzamora et al. 2012 ).
So far, only bacteriocins of Bacillus spp. have been extensively studied and mostly used in plant production (Nazari and Smith 2020 ; Negash and Tsehai 2020 ). Bacteriocins bacthuricin F4 and thuricin 17 are produced by different B. thuringiensis strains, especially B. thuringiensis BF4 and NEB17. These bacteriocins, along with bacteriocin C85 secreted by B. cereus UW85, have been reported to possess growth promotion properties in plants (Negash and Tsehai 2020 ). Applying a cocktail containing the combination of the 3 bacteriocins and their producing strains increased photosynthesis by 6%, plant dry weight by 15%, root nodulation by 21%, and leaf area in corn, soybean, and tomato plants when compared with controls. These bacteriocins exhibit bacteriocidal and bacteriostatic activities that promote disease resistance in plants.
Mirzaee et al. ( 2021 ) recently reported that plant-produced bacteriocins inhibit different plant pathogens while conferring resistance to diseases in tomatoes. Furthermore, other bacteriocins such as amylocyclicin, Bac 14B, Bac-GM17, putidacin, and cerein 8A have been used for both antimicrobial activity and growth promotion in plants (Cherif et al. 2001 , 2008 ; Hammami et al. 2009 ; Prudent et al. 2015 ).