Material and methods
1. Animals
1.1. Rodents
Primary cell culture experiments were conducted using Sprague Dawley rats, sourced from the
Animal Facility of the University of the Basque Country (UPV/EHU) (Leioa, Spain). C57BL/6J mice
obtained from Jackson Laboratories (Bar Harbor, Maine, USA) were used to perform stereotaxic
injections. Animals were housed under standard conditions, maintaining a 12 h light/dark cycle
and ad libitum access to food and water. Experiments were reviewed and approved by the
internal Animal Ethics Committee of the UPV/EHU, according to the guidelines set by the
European Communities Council Directive 2010/63/EU.
1.2. Zebrafish
Zebrafish (Danio rerio) were maintained under standard laboratory conditions at the University
of Edinburgh, in compliance with UK Home Office regulations (PP0103366) and institutional
ethical guidelines. Adult fish were housed on a 14-hour light/10-hour dark cycle. Embryos were
raised at 28.5 °C in 90 mm Petri dish with 10 mM HEPES -buffered E3 medium (5 mM NaCl,
0.17 mM KCl, 0.33 mM CaCl₂, 0.33 mM MgSO₄), staged by days post-fertilization (dpf) according
to Kimmel et al. (1995), and analyzed up to 4 dpf, prior to the onset of sexual differentiation.
The following transgenic lines were used in this study: Tg(mbp:EGFP-CAAX) (Almeida et al. 2011),
Tg(mbp:EGFP) (Almeida et al. 2011) , Tg(mpeg1:EGFP) (Ellett et al. 2011) and Tg(olig1:nls-
mApple) (Marisca et al. 2020).
2. Oligodendrocyte cell culture
Primary oligodendrocyte cultures were obtained as previously described (Barres et al. 1992) ,
with modifications (Sánchez-Gómez et al. 2018). Briefly, optic nerves were extracted from P11–
12 rats. After enzymatic and mechanical digestion, cells were filtered and seeded on 1 μg/ml
poly-D-lysine–coated (PDL) coatings (Sigma-Aldrich). Otherwise stated, OLs were maintained in
differentiation media, described in (Sánchez-Gómez et al. 2018).
Oligodendrocytes were seeded at 10,000 cells/well for immunocytochemical (ICC), cell viability
experiments and on Ibidi μ-Dishes for time -lapse imaging. For RNAseq analysis, 300,000
cells/well were seeded. For myelination assays, cells were seeded on coverslips with
polycaprolactone nanofibers (Sigma-Aldrich) at a 20,000 cells/well density and CNTF and NT -3
were omitted from the medium.
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3. Cortical glial cell cultures
Primary mixed glial cultures were obtained from the cortical lobes of P0 -2 rats, according to
previously described by Mcarthy & De Vellis (1980) with modifications (Sánchez-Gómez et al.
2018). Briefly, forebrains were dissected to isolate the cortical lobes and after enzymatic and
mechanical digestions, cell suspension was seeded in 75 cm 2 flasks coated with PDL (Sigma -
Aldrich). The resulting glial culture contained OPCs, microglia and astrocytes. After 14 days, the
different cell types were isolated and seeded using different mechanical shakings, based on the
different adhesion properties as described in Domercq et al. (2007) for microglial ce lls and in
Sánchez-Gómez et al. (2018) for OPCs. After detachment and isolation of microglia and OP Cs,
the astrocyte monolayer was trypsinized with Trypsin-EDTA (0.5 g/l porcine trypsin and 0.2 g/l
EDTA, Sigma-Aldrich) during 7 minutes and the cell suspension was seeded.
All cell types were seeded on PDL coatings and cell density was adjusted to experimental
requirements. For ICC and cell viabi lity assays, 10,000 OLs or microglia and 250,000 astrocytes
were seeded per well and in Ibidi μ-Dishes for time-lapse imaging. Myelin was added at 1 DIV.
4. Hippocampal neuronal cultures
Hippocampal neurons were prepared from embryonic day 18 rat embryos. Hip pocampi were
dissected from embryonic brains and dissociated in TrypLE Express (Thermo -Fisher) for 10 min
at 37°C. Cells were resuspended and homogenized in Neurobasal (Gibco) with 10% FBS Hyclone,
2 mM L -glutamine (both from Sigma -Aldrich) and 50 U/ml pen icillin-streptomycin (Gibco).
Hippocampal neurons were cultured on PDL-coated coverslips at 20.000 cells/well. The medium
was supplemented with B27 (Gibco) and 20 μM 5 -fluorodeoxyuridine and uridine (Sigma
Aldrich) and changed every 3 days. Myelin was added at 7 DIV.
5. Myelin extraction and labelling
Myelin was isolated from adult rat or mouse brains following the protocol established by Norton
& Poduslo (1973) . Briefly, brain tissue was mechanically homogenized in 0.32 M sucrose and
subjected to rounds of ultracentrifugation using 0.85 M sucrose gradients. Concentration of
isolated myelin was determined using Bradford protein assay (ThermoFisher) and labelled with
Alexa488-NHS or Alexa594-NHS dye (Invitrogen) for 1 hour at room temperature in PBS (pH=8).
Excess dye was removed by 24-hour dialysis, and labeled myelin was resuspended in sterile PBS
(pH=7.4) and frozen at -80oC.
For in vitro assays, myelin was thawed and vortexed for 3 0 seconds to obtain uniformly sized
aggregates and added to culture medium at 5 µg/ml for immunofluorescence and cell viability
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experiments and 1 µg/ml for time -lapse recordings. For in vivo experiments, myelin was
sonicated during 30 minutes before use and injected at 200 µg/ml.
6. Cell viability assays
Cell viability was assessed using the Calcein-AM dye (Invitrogen). C ells were incubated with 1
μM of dye for 30 minutes and fluorescence was measured with a Synergy HT fluorimeter reader
(Bio-Tek Instruments). Results are expressed as the relative percentage of cellular viability with
respect to control conditions.
7. Time-lapse imaging
Alexa-488 labelled myelin was added to the culture media 15 minutes prior to the beginning of
the recording to let myelin debris to settle and avoid out -of-focus images. Bright -field and
fluorescence images (488nm laser) were acquired every 10 minutes in 8-10 localized points using
a BioStation IM -Q microscope (Nikon). Cells were maintained at 37ºC and 5% CO 2 during the
recording.
8. Immunochemical analysis
For ICC analysis, primary cultures were fixed in 4 % paraformaldehyde (PFA) diluted in 0.1 M
phosphate buffer (PB) for 20 min. IHC was performed in free -floating sections obtained as
described in section 12.2. A standard immunofluorescenc e protocol was used consisting of a 1
hour incubation at room tempera ture (RT) in blocking solution containing 4 % normal goat
serum (Vector Labs) and 0.1 % triton X -100 in PBS, except for PDGFR -α antibody for which
normal donkey serum was used. Cells were incubated overnight at 4 ºC with primary antibodies,
followed by an hour incubation at RT with AlexaFluor-conjugated secondary antibodies and DAPI
(4 μg/ml; Sigma-Aldrich) for nuclei staining. After washings, coverslips were mounted on glass
slides using Dako Glycergel Mounting Medium (Agilent).
Primary antibodies used for immunohistochemistry were as follows: mouse anti‐MBP (1:500;
Biolegend), goat anti -PDGFR-α (1:250, R&D Systems), rabbit anti -NG2 (1:500; Abcam), mouse
anti-Olig2 (1:500; Milipore), rabbit anti-Ki67 SP6 (1:250, Abcam) and guinea pig anti-Iba1 (1:300;
Synaptic Systems). The corresponding Alexa Fluor secondary antibodies (ThermoFisher) were
used accordingly to the host species of primary antibodies at a 1:500 dilution.
9. Lipid droplet staining and imaging
Fixed cells were stained with Oil Red O (BioVision), fol lowing manufacturer’s instructions: cells
were incubated in 60% isopropanol for 5 minutes and then stained with Oil Red O (1.8 mg/ml in
dH2O) for 20 minutes. After consecutive washings in dH 2O, nuclei were stained with DAPI (4
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μg/ml; Sigma-Aldrich) and coverslips were mounted. Images were acquired in a Zeiss LSM880
Airyscan microscope using a 40x objective.
10. Confocal imaging and analysis
Immunofluorescence imaging was conducted on a Zeiss LSM880 Airyscan or Leica TCS SP8.
Imaging parameters were kept constan t within each experimental set. Image processing and
quantification were carried out using FIJI (ImageJ) software.
To assess oligodendrocyte morphology, we performed Sholl analysis. Individual cells were
segmented as regions of interest and skeletonized. Morphological complexity was measured as
the number of intersections between cell processes and concentric circle templates centered on
the soma.
11. Bulk RNA sequencing
Total RNA from OLs cultures was isolated using NZY Total RNA Isolation kit (NZYTech), according
to the manufacturer’s instructions. The quantity and quality of the RNAs were evaluated using
Qubit RNA HS Assay Kit (Thermo Fisher) and Agilent RNA 6000 Nano Chips (Agilent
Technologies), respectively. Sequencing libraries were prepared followin g “TruSeq Stranded
mRNA Sample Preparation Guide (Part # 15031058 Rev. E)” using the “TruSeq® Stranded mRNA
Library Prep” kit and TruSeq RNA CD Index Plate (Illumina). From 400ng of total RNA, mRNA was
purified, fragmented and primed for cDNA synthesis using Illumina and ThermoFisher reagents.
Then, A -tailing and adaptor ligation were performed. Finally, enrichment of libraries was
achieved by PCR and quantified using Qubit dsDNA HS DNA Kit (Thermo Fisher Scientific) and
visualized on an Agilent 2100 Bioana lyzer using Agilent High Sensitivity DNA kit (Agilent
Technologies). Using STAR software version 2.7.10b (Dobin et al. 2012), FASTQ files were aligned
to Rattus norvegicus genome data base “rn6” and reads for analysed features were assigned
and counted from the processed BAM files using SubRead's FeatureCounts version v2.0.3 (Liao,
Smyth, and Shi 2014). Differential expression analysis was performed with the R library DESeq2
version 1.44.0 (Love, Huber, and Anders 2014). GSEA were performed with described gene sets
using gene set permutations (n = 1000) for the assessment of significance and signal -to-noise
metric for ranking genes from the Molecular Signature Database ( https://www.gsea-
msigdb.org/gsea/msigdb/index.jsp) (Liberzon et al. 2015).
12. Exogenous myelin internalization in mice
12.1. Stereotaxic injections
Brain stereotaxic injections were performed in 8 -10 weeks old C57BL/6J mic e. Two 0.5 μl
injections of mouse-derived Alexa488-labelled myelin diluted in saline solution (0.9% NaCl) were
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performed at the following coordinates: Bregma 0.5 mm AP, 1.0 mm LM, 1.3 mm VD and Bregma
2.5 mm AP, 0.8 mm LM, 1.0 mm VD. The content was injected at a constant rate of 0.1 μl/min
using a Hamilton syringe, leaving the needle in place for an additional 3 minutes. Both injections
were made in the same hemisphere. In sham -operated control mice, saline was injected using
the equivalent procedures. Animals were perfused 24 or 48 hours after the injection.
12.2. Tissue processing for immunohistochemistry
Mice were anesthetized and perfused with 4 % PFA in 0.1 M PB. Dissected brains were post -
fixed overnight at 4 °C in the same solution. Then, coronal 40 µm -thick sections were obtained
using a Microm HM 650V Microtome (ThermoFisher). Sections were selected for further staining
based on the presence of fluorescent signal from myelin and/or the tissue scar from the surgery
in the case of sham animals.
12.3. Transmission electron microscopy
Mice were anesthetized and perfused with 4 % paraformaldehyde and 0.1% glutaraldehyde in
0.1 M PB. Coronal 50 μm-thick brain sections were obtained using a Microm HM650V microtome
(Thermo Fisher).
To stain Alexa -488 labelled myelin using immunogold, slices were incubated with blocking
solution (10% BSA, 0.1% sodium azide, 0.05% triton X-100 in TBS) for 60 min at RT. Subsequently,
sections were incubated with rabbit IgG anti -Alexa 488 antibody (1:100, ThermoFisher) in
blocking solution for 4 days at 4°C. Following several washes, sections were incubated for 2 h at
RT with 1.4 nm gold -labeled goat anti -rabbit IgG (1:200; Nanoprobes Inc.) in blocking buffer.
Sections were postfixed in 1% glutaraldehyde for 10 min at RT and washed in ddH20. Gold
particles were silver -intensified with a HQ Silver kit (Nanoprobes) in the dark for 12 min and
tissue was washed with ddH20 followed by 0.1 M PB.
The day after, sections were osmicated (1% OsO4 in 0.1 M PB) for 30 min and dehydrated in
graded ethanol concentrations (50 –100%) to propylene oxide and embedde d in epoxy resin
(Sigma-Aldrich) by immersion in decreasing concentration of propylene oxide. Tissue was then
embedded in fresh resin overnight and allowed to polymerize at 60°C for 2 days.
Semithin sections (500 nm thick) were cut using a PowerTome ultramicrotome (RMC Boeckeler)
and stained with 1% toluidine blue for sample orientation. Ultrathin sections (50 –60 nm thick)
were cut with a diamond knife (Diatome), collected on nickel mesh grids, and stained with 4%
uranyl acetate for 30 min followed by 2.5% lead citrate for 10 min.
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TEM images were obtained using the JEOL JEM 1400 Plus electron microscope (SGiker,
UPV/EHU) at magnifications ranging from 1000x to 8000x.
13. Myelin internalization in zebrafish
13.1. Intracerebroventricular injections
At 3 dpf, larvae wer e anesthetized using 600 μM Tricaine (Sigma -Aldrich) and embedded in a
2.5% agarose drop. Larvae were oriented ventrally, with the yolk sac oriented to the bottom of
the drop, allowing access to the dorsal area. The needle was positioned through the thin r oof
plate of the hindbrain without damaging the brain tissue beneath. Each larva received two
sequential 0.5 nl microinjections of Alexa -594 or -488 labelled myelin in nuclease -free water,
which was also injected as a control. Following the injection, hear tbeat and circulation were
checked and larvae were gently released from the agarose. Injected fish were transferred to 12-
well plates with E3, where they were maintained until imaging. Fish were monitored until full
recovery from anaesthesia, and only thos e exhibiting normal swimming behaviour were
included in subsequent analyses.
13.2. Live imaging and quantification of zebrafish larvae
For live imaging, 3 –4 dpf zebrafish larvae were anesthetized with 600 μM Tricaine (Sigma -
Aldrich) and mounted laterally in 2.5% agarose as described by Vagionitis & Czopka (2018) .
Imaging was performed using a Zeiss LSM880 confocal microscope equipped with Airyscan
detection and a Zeiss W Plan -Apochromat 20×/1.0 NA water -dipping objective or Zeiss Axio
Imager Z1 equipped with an Apotome.2 unit and using a 10× objective. Larvae injected with
labelled myelin were visually scored for distribution of fluorescence over the spinal cord area as
high (continuous fluorescence >10 clusters), low (sparse <5 clusters), or medium with
intermediate amounts of fluorescence. Animals lacking detectable fluorescence were excluded
from experimental groups.
For internalization experiments, fluorescence was assessed throughout the spinal cord and
brain, with specific regions of interest sampled for an alysis. For figure preparation, maximum -
intensity projections of z-stacks were generated and representative regions were cropped.
For cell counting, the anal pore was used as a reference point to image a consistent anterior
region covering the full depth o f the spinal cord. Individual oligodendrocytes were manually
counted in each z -stack and classified as ventral or dorsal based on their contact with the
Mauthner axon and normalized to the imaged length. A minimum of two independent injection
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rounds were analyzed. All zebrafish images are shown as lateral views of the spinal cord, with
anterior to the left and dorsal at the top.
13.3. Statistical analysis
Data are presented as mean ± standard error of mean (SEM) and n represents the number of
animals, cultures or cells analyzed, as specified in figure legends. Statistical analyses were
performed using GraphPad Prism 8 (GraphPad Software Inc). Comparisons between two groups
were analysed using paired Student’s two-tailed t-test in in vitro experiments and unpaired in in
vivo experiments. p values < 0.05 were considered statistically significant.
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Results
1. Oligodendroglia internalize exogenous myelin debris in vitro
In order to address the internalization capacity of oligodendroglial cells along the lineage , we
first exposed different p rimary rat cell cultures to Alexa -labelled myelin debris for 48 hours
(Figure 1B) . Myelin was isolated from rats (Figure 1A) to prevent cross -species reactivity.
Notably, both OLs and OPCs were found to internalize exogenous myelin (Figure 1C). Confocal
imaging of OLs labelled with the membrane-linked Calcein-AM dye confirmed the internalization
of myelin debris by oligodendroglia (Suppl. Figure 1).
Interestingly, our results suggest a maturation -dependent enhancement of phagocytic or
endocytic activity within the oligodendroglial lineage (Figure 1D). Specifically, OLs were more
efficient at engulfing extracellular myelin, with more than 90% of cells containing internalized
myelin particles. In contrast, OPCs presented significantly lower levels of internalization, with
only about 20% of the cells showing uptake, potentially indicating a more limited role in debris
clearance at this developmental stage.
In order to further explore the temporal dynamics of myelin internalization, we performed time
lapse imaging of cultured OLs over 48 hours (Figure 1E). Interestingly, the processes of OLs were
the first cellular region contacting the myelin debris and some particles were observed migrating
along the processes toward the soma (Figure 1E, bottom section) . The relative size of myelin
debris compared to the thin OL processes strongly suggests that complete internalization occurs
upon reaching the soma. After 48 hours, myelin accumulated predominantly in clusters within
the cytoplasm and only small particles remained in the processes. In phagocytic cell types, such
as microglia and macrophages, internalized material typically accumulates in the soma, where
it is processed and degraded by lysosomal enzymes (Trivedi et al., 2020; Yu et al., 2022). Thus,
the clustering of myelin within this region in OLs further supports the idea that internalization is
completed upon arrival of myelin debris to the cell body.
During the 48 -hour time -lapse imaging period, OLs remained static while their processes
extended radially. Notably, OL processes did not exhibit directed growth toward the nearby
myelin particles, suggesting that they do not actively pursue it. Instead, they appear to maintain
their intrinsic growth patterns and may initiate internalization upon passive contact .
Importantly, compared t o controls, OLs exposed to myelin appeared more ramified and
exhibited an increased cell size. Morphological sholl analysis confirmed that myelin-exposed OLs
were larger and exhibited higher process complexity, as determined by increased branching.
Moreover, exposure to myelin enhanced cell survival, as indicated by a reduction in cell death
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compared to control conditions during the time -lapse imaging period (Figure 1F , green
arrowheads).
Building on these observations, we next investigate d the effects of myelin exposure on
microglia, astrocytes and neurons in vitro. As expected, microglial cells (Suppl. Figure 2A) actively
phagocytosed myelin particles and over 1 hour most of microglia cell bodies visible by phase
contrast progressively became Alexa -Fluor+. The microglial re sponse was characterized by a
higher and more rapid uptake of myelin when compared to OLs , supporting the ir established
role in the clearance of myelin debris as professional phagocytic cells (Franklin and Ffrench -
Constant 2017; Kotter et al. 2006) . In contrast, astrocytes (Suppl. Figure 2B) exhibited minimal
uptake and some myelin clusters were observed around the cells. Moreover, exposure to myelin
did not appear to disrupt the astrocytic monolayer . Similarly, neurons showed no significant
internalization of myelin (Suppl. Figure 2C) . In both cases, exposure to myelin did not affect
cellular survival (Suppl. Figure 2D).
These findings highlight the distinct contributions of different cell types in the internalization
and clearance of myelin debris . Moreover, myelin appears to signal back specifically to OLs,
promoting lineage progression and survival. These results lead us to hypothesize that myelin
debris may alter metabolic and signalling pathways, thereby promoting OL differentiation
and/or myelination. Our results demonstrate that OLs, in addition to microglia, are also capable
of internalizing myelin, particularly as they mature. Based on these findings, we directed
subsequent experiments towards myelinating OLs to further elucidate pathways triggered by
myelin internalization.
2. Exposure to myelin alters the metabolic transcriptional profile of oligodendrocytes
We performed RNA sequencing of OLs cultured in the presence of myelin for 48 hours , which
depicted 63 differentially expressed genes (Figure 2B). Gene Set Enrichment Analysis (GSEA)
(Figure 2C) revealed that myelin exposure triggered a downregulation of immune -related
signaling, including tumor necrosis factor alpha (TNF α), interleukin signaling, interferon
response and inflammatory re sponse and complement pathways (Figure 2D) . This
transcriptomic profile suggests a distinct cellular phenotype, diverging from the disease-specific
state activated in OLs under experimental MS conditions (Falcão et al. 2018).
In addition, several metabol ic pathways were significantly altered. Notably, genes involved in
cholesterol homeostasis were downregulated (Figure 2E). This included reduced expression of
key enzymes critical to the mevalonate pathway for cholesterol biosynthesis , such as
mevalonate diphosphate decarboxylase ( Mvd), phosphomevalonate kinase ( Pmvk) and
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emopamil binding protein ( Ebp), along with acyl-CoA synthetase short-chain family member 2
(Acss2), which contributes to precursor synthesis . These findings suggest that internalized
myelin may serve as an exogenous source of cholesterol, thereby reducing the need for de novo
synthesis and potentially facilitating lipid recycling for new myelin production . Indeed, Oil Red
O staining revealed that internalized myelin induced an increase in lipid droplets (LDs)
formation, which colocalize with myelin, suggesting that internalized myelin is stored within lipid
droplets (Figure 3). LDs are key organelles that maintain lipid homeostasis, prevent cholesterol
overload (Nugent et al. 2020; Ralhan et al. 2021) and regulate lipid intermediates necessary for
myelin synthesis (S. A. Berghoff et al. 2021; Hayashi and Su 2004) . Therefore, the presence of
LDs in our model further supports the notion that internalized myelin is actively being processed
and recycled.
Within the “Cholesterol Homeostasis” gene signature, we also found a downregulation of genes
involved in fatty acid metabolism. This included fatty acid synthase ( Fasn), a key enzyme
involved in de novo fatty acid synthesis, along with stearoyl-CoA desaturase (Scd) and fatty acid
desaturase 2 ( Fads2), which mediate fatty acid desaturation and elongation, respectively.
Additionally, genes linked to lipid anabolism within the “Lipid Metabolic Process” signature, such
as fatty acyl -CoA redu ctase 2 ( Far2) and fatty acid transporter 6 ( Slc27a6), were also
downregulated (Figure 2F). These finding s suggest that myelin -derived metabolites may
influence the lipid pool in OLs, thereby downregulating endogenous lipid biosynthesis pathways.
In contr ast, pathways associated with lipid catabolism showed a tendency towards an
enrichment, including fatty acid metabolism and oxidative phosphorylation (Figure Suppl. 3A-
B). This result supports the hypothesis that OLs may be activating the molecular machine ry
required to process the lipid components present in internalized myelin. Among the top 15
upregulated genes within the “Fatty Acid Metabolism” signature, we identified key lipid
transporters and activators, such as carnitine palmitoyltransferase 1A (Cpt1a) and 2 (Cpt2) and
acyl-CoA synthetase medium -chain family member 3 ( Acsm3). Notably, critical enzymes
involved in the β-oxidation pathway, including 3-ketoacyl-CoA thiolase (Acaa2), 2,4-dienoyl-CoA
reductase 1 ( Decr1) and acyl -CoA thioesterase 2 ( Acot2) and 8 ( Acot8) were also found to be
upregulated.
Finally, p athways associated with cell proliferation and differentiation, such as transforming
growth factor β ( Tgfβ) signaling, showed a non-significant enriched expression, as well as, the
“Oligodendrocyte differentiation ” signature (Figure Suppl. 3C-D). Altogether, transcriptomic
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analysis revealed that myelin exposure upregulates metabolic and signaling pathways, which
could promote OL differentiation and myelination.
3. Myelin internalization triggers oligodendrocyte proliferation in vitro
We next assessed the effects of myelin internalization on oligodendroglial lineage progression.
After exposing primary OL cultures to myelin, we found that myelin debris increased cell viability
by ~80%, as assessed by Calcein -AM, which could be attributed either to a greater number of
viable cells and/or to an increase in cell size (Figure 4B). To better understand the underlying
cause, we conducted additional analyses using immunocytoc hemistry. Consistent with cell
viability assays, i mmunostaining of the oligodendroglial lineage marker Olig2 confirmed an
increase in the total number of cells (Figure 4C). Interestingly, proliferation marker Ki67 was
enhanced in cultures exposed to myelin (Figure 4C), suggesting a boost in proliferation. This
observation likely reflects an expansion of the OPC pool (Dimou and Götz 2014; Young et al.
2013), which was further confirmed by the increase in NG2+ cells (Figure 4D). In parallel, we
detected higher numbers of MBP+ myelinating oligodendrocytes, while the ratio of NG2 + to
MBP+ cells remained constant (Figure 4 D). Thus, myelin internalization accelerates lineage
progression maintaining the dynamics between precursor and mature stages. These changes
prompted us to investigate whether internalized myelin boosted myelination capacity of mature
OLs, typically associated to a more differentiated state (Bradl and Lassmann 2010). To this end,
we seeded mature OLs onto coverslips containing synthetic nanofibers. We found that exposure
to myelin significantly enhanced nanofiber myelination , as shown by an increase in OL area
(Figure 4E).
Taken together, our results suggest that myelin internalization triggers OL proliferation, as well
as morphological complexity and differentiation. Thus, myelin debris may serve as a positive
regulator that activates the intrinsic program of OL development and myelination, promoting
both expansion and progression of the oligodendroglial lineage.
4. Internalization of exogenously injected myelin in the mouse brain
In vitro experiments were conducted in the absence of other cell types and their associated
signalling interactions present in vivo. Therefore, it was important to investiga te whether the
internalization of myelin by OLs and the accompanying increase in proliferation was also
observed in a more complex cellular environment. We aimed to determine first, whether the
capacity of OLs to internalize myel in is sufficiently robust to be observed in the presence of
active microglia, and second, whether microglial uptake of myelin debris trigger s signalling
cascades that modulate OL behaviour. To this end, we performed stereotaxic injections of
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fluorescently labelled myelin into the cerebral cortex of adult mice. Although myelin debris is
typically associated with demyelinating pathologies or injury, we sought to isolate the
internalization process from confounding factors, such as OL dysfunction. While the stereotaxic
procedure inherently induces a local inflammatory response , this approach enabled us to
evaluate OL internalization capacity under non -demyelinating conditions. Moreover, myelin
turnover may also involve clearance mechanisms beyond microglial phagocytosis, potentially
implicating OLs themselves.
As expected, microglial cells rapidly migrated towards the injection site. Within the first 24 hours
post-injection, most microglial cells accumulated in the injection core (Figure 5A), temporarily
depleting microglia from the immediate surroundings and forming a circular gap with a radius
of 150–300 µm, which was subsequently repopulated over the following 24 hours (Figure 5B).
Immunohistochemistry confirmed that microglia were the predominant cell type within the
injection site and internalized debris was clearly localized within phagocytic pouches (Figure 5C).
Microglia adopted a rounded, amoeboid morphology typical of activated, phagocytic cells. These
findings were corroborated by electron microscopy (EM), which visualized Alexa-labelled myelin
debris within intracellular compartments in microglial cytoplasm (Figure 5 D). This expected
behaviour validated the approach and served as a positive control that the surgery procedure
did not impair the capacity of phagocytic cells to internalize exogenous myelin.
Interestingly, 48 hours post-injection we also identified a subset of PDGRα+ OPCs (Figure 5E) and
APC+ OLs (Figure 5G) containing myelin particles, as confirmed by TEM analysis (Figure 5F and
5H). This was observed in a more limited and structurally distinct manner compared to microglia.
Unlike the well -formed phagocytic vesicles seen in microglia, internalized myelin within OLs
appeared in smaller, s cattered inclusions without the formation of large degradation
compartments. This could also reflect the lower myelin load within OLs, which may allow them
to degrade and process debris without activating the same specialized degradation pathways
observed in professional phagocytes.
We next sought to determine OL proliferation. The stereotaxic procedure itself triggers a local
proliferative response in the cortical area surrounding the injection , masking any additional
effect that myelin may exert. As a result, the proliferation marker Ki67 increased compared to
the contralateral hemisphere, but no significant difference was detected between myelin- and
sham-injected animals (Figure 5I). Therefore, in order to address whether myelin internalization
influences OLs proliferation in vivo without injury -related confounds, we complemented our
analysis using the zebrafish model.
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17
5. Exogenously injected myelin increases oligodendrocyte number in the zebrafish
Zebrafish larvae offer a transparent and genetically tractable system allowing for high spatial-
temporal resolution for live imaging (Chia et al. 2022; Doszyn, Dulski, and Zmorzynska 2024) .
This model enables for in vivo visualization of myelin internalization dynamics, while preserving
the complexity of a living organism.
We performed brain ventricle injections in transgenic zebrafish larvae expressing membrane -
targeted EGFP under the myelin basic protein promoter ( Tg(mbp:EGFP-CAAX)), which allows
selective labelling of OLs (Almeida et al. 2011) . Membrane localization of EGFP facilitates the
assessment of potential internalization of myelin, as engulfed debris can be clearly distinguished
within the boundaries of myelinating oligodendrocytes, including fine processes and soma.
Labelled myelin was injected into the brain ventricle at 3 days post-fertilization (dpf) and to avoid
a potential confounding localized response to the injection, the spinal cord was imaged, rather
than the injection site at different time points (Figure 6A). At this developmental s tage, brain
ventricles are already connected to the spinal canal, allowing the movement of injected material
directly into the spinal cord. Control animals were injected with vehicle solution.
To determine the distribution and diffusion of Alexa-labelled myelin following injection, we first
imaged 2 hours post-injection. The spinal cord was divided into anterior, central and posterior
regions for analysis. The anterior region (Figure 6B), located closer to the brain ventricle, showed
clear presence of labelled myelin debris dispersed along and outside the central canal, reaching
both the ventral and dorsal myelinated tracts of the spinal cord. T he central and p osterior
regions (Figure Suppl 4A), situated more caudally along the tail, showed little to no detectable
myelin at this time point . This confirmed that the injected material diffused through the
cerebrospinal fluid and reached the anterior spinal cord, allowing for potential interaction with
resident oligodendrocytes. At this early time point, however, we did not observe internalization
of myelin by oligodendrocytes . Importantly, zebrafish larvae did not exhibit any visible
behavioural abnormalities or morphological defects following injection and the introduced
myelin was well tolerated, indicating that it was not toxic at the administered concentration.
By 24 hours post -injection, myelin fragments had formed more discrete clusters, typically 7 to
10 per fish, distributed along the spinal cord. To determine the identity of the cells containing
these clusters, we repeated the injections in Tg(mpeg1:EGFP) zebrafish (Ellett et al. 2011) ,
labelling microglia and macrophages. Colocalization analysis revealed that large myelin clusters
were predominantly found within microglial cells, confirming their ac tive role in mye lin
phagocytosis (Figure Suppl 4B). In addition to microglial uptake, we also detected smaller myelin
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18
particles contained within the soma of OLs (Figure 6C) and associated with their myelin tracts
(Figure 6D). These findings demonstrate tha t, consistent with our in vitro data and murine
model, OLs in zebrafish are capable of internalizing exogenous myelin.
We next evaluated the impact of myelin internalization on the oligodendroglial lineage in the
zebrafish spinal cord. Remarkably, 24 hours after the injection of myelin, we observed a modest
yet significant increase in the number of ventral OLs (Figure 6E), which are located closer to the
central canal where the injected myelin accumulates. In contrast, dorsal OLs, potentially less
exposed to myelin, did not show a significant change in cell number. This spatially restricted
response suggests a direct, contact-dependent effect, potentially driven by direct internalization
of myelin debris. Moreover, OPCs, imaged in Tg(olig1:nlsmApple) zebrafish (Marisca et al. 2020),
showed a non-significant increase following injection of myelin (Figure 6F). Taken together, and
considering that zebrafish development is characterized by low levels of oligodendroglial cell
death (Almeida and Lyons 2016) , these findings suggest that myelin uptake could locally be
enhancing proliferation, rather than promoting oligodendroglial survival.
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19
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Figures and legends
Control Myelin
0
2,000
4,000
6,000
8,000
10,000
Area MBP+ (m2/cell) ✱✱✱✱
OPCs OLs
0
20
40
60
80
100
Cell internalization of
exogenous myelin (%)
Cells with
internalized myelin
Cells without
internalized myelin
✱✱✱✱
0 20 40 60 80 100
0
20
40
60
Radial distance to center (m)
Number of intersections
Control
Myelin
YZ
XZ
OligodendrocytesOPCs
YZ
A B
C D
Alexa-labellingAdult rat brain Isolation of myelin
0h 12h 24h
Myelin
6h
ControlMyelin
30h 35h 40h 45h
XZ
Control Myelin
48hE
F
OligodendrocytesOPCs
My PDGFRα Olig2 DAPI
Myelin MBP DAPI
Myelin PDGFRα DAPI
My MBP Olig2 DAPI
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32
Figure 1. Internalization of exogenous myelin by oligodendroglial cells .
(A) Schematic illustrating the isolation and fluorescent labelling of myelin debris. ( B)
Experimental design for evaluating myelin uptake. ( C) Orthogonal confocal views showing
internalized exogenous myelin within oligodendrocytes (OLs) and oligodendrocyte precursor
cells (OPCs). Scale bar: 10 µm. (D) Comparative analysis of myelin internalization between OPC
and OL cultures. Scale bar: 20 µm. (E) Time-lapse imaging of OLs reveals increased morphological
complexity and cell abundance in response to myelin exposure (top), and transport of
internalized myelin along OL processes (bottom). Scale bar: 50 µm; zoomed -in panel: 20 µm.
(F) Sholl analysis of OLs after 48 hours of myelin exposure. Scale bar: 20 µm. Area under the
curve: Control, 1052 ± 78.7; Myelin, 2303 ± 139; ****p < 0.0001. Peak number of intersections:
Control, 26.2; Myelin, 49.9. Each dot represents a single cell (n = 15).
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33
Figure 2. Transcriptional profile of oligodendrocytes exposed to exogenous myelin debris.
OLs were treated with Alexa -labelled myelin for 48 hours, from DIV 1 to 3, followed by
transcriptomic analysis (n = 4 cultures). ( A) Principal component analysis (PCA) showing clear
separation between treated and untreated samples. ( B) Volcano plot displaying significantly
upregulated genes (red) and downregulated genes (blue) in OLs exposed to myelin compared to
control conditions. Differentially expressed genes (DEGs) were defined by │fold change│ > 1.5
and adjusted p-value < 0.05. Representative DEGs are labelled. (C) Gene Set Enrichment Analysis
(GSEA) of Hallmark pathways, showing the top 15 upregulated (red) and downregulated (blue)
biological processes ranked by normalized enrichment score (NES). Significantly enriched
pathways (FDR q-value < 0.25) are highlighted. Metabolic, differentiation-related and immune-
related pathways are indicated in green, red, and blue, respectively. (D-E) Enrichment plots (left)
for selected Hallmark gene sets with corresponding NES, FDR q -values, and Core Enrichment
Genes (CEGs), defined as the percentage o f significantly enriched genes in the set. Heatmaps
(right) show the top 15 most enriched genes for each pathway. (F) Enrichment plot for the “Lipid
metabolic process” gene signature.
-2 0 2
Normalized Enrichment Score
DNA repair
Adipogenesis
Oxidative phosphorilation
Xenobiotic metabolism
Hypoxia
UV response
Fatty acid metabolism
Apical junction
Myogenesis
Wnt β-catening signaling
Bile acid metabolism
TGFβ signaling
Apical surface
Hedgehog signaling
Notch signaling
Angiogenesis
PI3K AKT MTOR signaling
MTORC1 signaling
Cholesterol homeostasis
Coagulation
Complement
KRAS signaling
IL6 JAK STAT3 signaling
Allograft rejection
IL2 STAT5 signaling
Pancreas β cells
Interferon α response
Interferon γ response
Inflammatory response
TNFα signaling via NFKβ
D
A
PCA
Dim 1 (30.6%)
0 50-50
0
50
-50 Dim 2 (27.4%)
B C
GSEA - Hallmarks
-1 0 1
0
2
4
Log2FoldChange
-Log10padj Abca1
Abcg1
IL6
Slc43a3
Cldn10
St8sia3
Control Myelin
INFLAMMATORY RESPONSE
Trib3
Plaur
Atf5
Fads2
Mvd
Acss2
Fabp5
Fasn
Scd
Acat2
Ebp
Pcyt2
Cxcl16
Pmvk
Sema3
NES = -1.2941
FDR q-value = 0.2337
LIPID METABOLIC PROCESSCHOLESTEROL HOMEOSTASIS MyelinControl
FE
Clec5a
Ccl22
Edn1
Tnfrsf9
Il18rap
Ccrl2
Csf3
Il6
Inhba
Il10
Scarf1
Ptger2
Lta
Lif
Ccl5
MyelinControl
NES = -1.0832
FDR q-value = 0.1754
NES = -1.8736
FDR q-value = 0.0005
Aoah
Dgkb
Etfbkmt
Far2
Ptgr1
Gal3st4
Rbp3
Aldh3a1
St8sia3
Acsm3
Dpep1
Slc27a6
Adh1c
Neu4
Fmo5
MyelinControl
CEG = 17.97%
CEG = 46.75%
CEG = 50.75%
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34
Figure 3. Lipid transport and storage following myelin internalization in oligodendrocytes. OLs
were cultured with Alexa Fluor 488 -labeled myelin for 48 hours. Myelin internalization led to
increased formation of lipid droplets, visualized by Oil Red O staining, which labels neutral lipids.
Scale bar: 10 µm. *p < 0.05.
Control
Myelin
0
200
400
600
800
1,000
1,200
Oil Red+ area (m2/cell)
✱
DAPIMerge Oil Red Myelin
ControlMyelin
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35
Figure 4. Exogenous myelin promotes oligodendroglial lineage progression . (A) Schematic of
the experimental design. (B) Calcein-AM viability assay showing fluorometric values normalized
to control mean. ( C) Immunocytochemical (ICC) analysis of OL cultures indicates that myelin
exposure increases the number of oligodendrocytes (Olig2⁺), associated with enhanced
proliferation (Ki67⁺). (D) This increase results in higher numbers of myelinating oligodendrocytes
(MBP⁺) and oligodendrocyte precursor cells (NG2⁺), without affecting the proportion of
progenitors to mature OLs. ( E) Enhanced myelination of nanofibers by myelin -exposed OLs,
reflected by an increased cellular area. Scale bars: A–C 50 µm; D-E 25 µm. *p < 0.05, **p < 0.01,
***p < 0.001
Control
Myelin
0
10
20
30
40
NG2+ cells/mm2
✱
Control
Myelin
0
100
200
300
400
500
MBP+ cells/mm2
✱✱
Control
Myelin
0
200
400
600
800
1,000
1,200
Olig2+ cells/mm2
0.0802
ControlMyelin
C
A Control MyelinB
D
MBP NG2 Myelin DAPI
MergeMyelin Olig2
Calcein-AM
ControlMyelin
Ki67
Control
Myelin
0
10
20
30
40
Ki67+ Olig2+/ Olig2+ (%)
✱
Control
Myelin
0
100
200
300
Cell viability (%)
✱✱✱
MBP Myelin Olig2
ControlMyelin
Control
Myelin
0
20
40
60
80
100
MBP or NG2 / MBP + NG2
(% of cells)
OLs
OPCs
0.9858
Control
Myelin
0
20
40
60
80
100
MBP or NG2 / MBP + NG2
(% of cells)
OLs
OPCs
0.9858
E
Control
Myelin
0
1,000
2,000
3,000
MBP+ area (µm2/cell) ✱
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36
Figure 5. Internalization of Alexa Fluor 488 -labeled myelin debris in adult mice following
stereotaxic injection. (A) Cortical section showing microglial migration to the injection site 24
hours post-surgery, resulting in a cell -free gap around the injecti on core indicated by a dotted
line. Scale bars: 300 µm (main), 100 µm (zoom). ( B) Repopulation of surrounding areas by
microglia 48 hours after injection. Scale bar: 50 µm. (C) Formation of phagocytic pouches within
microglia actively internalizing myelin debris. Scale bar: 10 µm. (D,F,H) Immunogold labelling of
Alexa Fluor 488 -labeled myelin (white arrows) confirms internalization by microglia ( D), OPCs
(F), and oligodendrocytes (H), as observed by transmission electron microscopy (TEM). Microglia
exhibit large vesicles (white), indicative of professional phagocytosis, whereas oligodendroglia
show more diffuse internalized structures. Scale bar: 1 µm. ( E,G) Internalization of exogenous
myelin by OPCs (E) and OLs (G) in vivo. Scale bars: 20 µm (main), 10 µm (zoom). (I) Quantification
of proliferating cells at the injection site 48 hours after injection in both sham - and myelin-
injected animals in a radius of 300 µm around the lesion site . A dashed line indicates basal
proliferation levels in a corresponding a rea of the contralateral hemisphere. No significant
differences in basal proliferation were detected. Each dot represents an individual injection.
Sham
Myelin
0
100
200
300
400
500
Ki67+ cells / mm2
0.1999
A
MBP Iba-1 Myelin
B
C
D
I
Iba-1 Myelin DAPI
Ki67
Control
Myelin
Injected
hemisphere
Contralateral
hemisphere
OPCs OLs
Microglia
E
E
F G H
PDGFRα Myelin DAPI
Injected
hemisphere
Contralateral
hemisphere
APC Myelin DAPI
Ki67 Myelin
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37
Figure 6. Oligodendrocytes internalize exogenous myelin in zebrafish. (A) Schematic
representation of cereb roventricular injections of Alexa Fluor -labelled myelin performed at 3
days post-fertilization (dpf) in Tg(mbp:EGFP-CAAX) zebrafish, which express membrane-bound
GFP in oligodendrocytes. (B) Confocal imaging of the spinal cord 2 hours post -injection shows
the diffusion of fluorescent myelin into the central canal in the anterior region. (C–D) 24 hours
post-injection, myelin signal is largely cleared from the canal, but a small fraction of exogenous
myelin remains visible within the somata ( C) and processes (D) of oligodendrocytes. (E)
Representative spinal cord images from Tg(mbp:EGFP) (somatic fluorescence in OLs) and
Tg(Olig1:nls-mApple) (nuclear marker for OPCs) zebrafish at 24 h post -injection, with
quantification of myelin-positive cells. Scale bar = 10 µm.
ControlMyelin
Myelin MBP
A
B
C
XZMyelin MBP
E
XZ
YZ
YZ
Myelin MBP
Myelin MBP
ControlMyelin
Myelin Olig1
Dorsal
Ventral
F
D
ControlMyelin
Control
Myelin
0
5
10
15
Dorsal OLs
OLs / 100m
Control
Myelin
0
5
10
15
20
Ventral OLs
OLs / 100m
✱
Control
Myelin
0
10
20
30
40
Total OLs
OLs / 100m
Control
Myelin
0
10
20
30
40
Total OPCs
OPCs / 100m
0.0607
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