Abstract
The cortically anchored adaptor KANK1 organizes microtubules at focal adhesions through a long, intrinsically disordered linker (L2), yet how this linker spans the ∼35–50 nm membrane–microtubule gap is unclear. Here, we combine in-cell, biochemical, and biophysical assays, predictions of motif interaction and multivalent assembly using AlphaFold, and structural analysis by electron microscopy to show that the hub protein LC8, which binds more than 100 clients, converts the intrinsically disordered 600 amino acid L2 into an elongated, multivalent, rod-like assembly. In contrast, isolated motif peptides fail to bind LC8 at physiologically relevant concentrations, indicating that strong complex formation arises from cooperativity among multiple weak sites. These results establish LC8 as a molecular switch that rigidifies and extends KANK1 L2 via distributed weak motifs and short linkers. This interaction produces compositionally homogeneous yet conformationally adaptable rods, long enough to bridge the membrane–microtubule gap, resolving the paradox. This work expands the LC8 binding repertoire, reveals design principles for multivalent assembly, and suggests a generalizable strategy for tuning length, rigidity, and flexibility in large protein architectures.
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Abstract
The cortically anchored adaptor KANK1 organizes microtubules at focal adhesions through a long, intrinsically disordered linker (L2), yet how this linker spans the ∼35–50 nm membrane–microtubule gap is unclear. Here, we combine in-cell, biochemical, and biophysical assays, predictions of motif interaction and multivalent assembly using AlphaFold, and structural analysis by electron microscopy to show that the hub protein LC8, which binds more than 100 clients, converts the intrinsically disordered 600 amino acid L2 into an elongated, multivalent, rod-like assembly. In contrast, isolated motif peptides fail to bind LC8 at physiologically relevant concentrations, indicating that strong complex formation arises from cooperativity among multiple weak sites. These results establish LC8 as a molecular switch that rigidifies and extends KANK1 L2 via distributed weak motifs and short linkers. This interaction produces compositionally homogeneous yet conformationally adaptable rods, long enough to bridge the membrane–microtubule gap, resolving the paradox. This work expands the LC8 binding repertoire, reveals design principles for multivalent assembly, and suggests a generalizable strategy for tuning length, rigidity, and flexibility in large protein architectures.
Competing Interest Statement
The authors have declared no competing interest.
Footnotes
Negative stain electron microscopy of 7-mer and 15mer constructs to validate binding predictions and demonstrate rigidity; Reworked focus on the paradox wherein KANK1 L2 is implicated in spanning a in-cell gap that is larger than it should be able to span as an IDP; Intro, figure, and discussion edits to facilitate this shift in focus.
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