Abstract
Reliance on internal predictive models of the world is central to many theories of human cognition. Yet it
is unknown whether humans acquired multiple separate internal models, each evolved for a specific
domain, or maintain a globally unified representation. Using fMRI, we show that during naturalistic
experiences (during movie watching or narrative listening), adult participants selectively engage three
topographically distinct midline prefrontal cortical regions, for different forms of predictions. Regions
responded selectively to abstract spatial, referential (social), and temporal domains during model updates
implying separate representations for each. Prediction -error-driven neural transitions in these regions,
indicative of model updates, preceded subjective belief changes in a domain -specific manner. We find
these parallel top -down predictions are unified and selectively integrated with sensory streams in the
Precuneus, shaping participants' ongoing experience. Results generalized across sensory modalities and
content, suggesting humans recruit abstract, modular predictive models for both vision and language. Our
Results
highlight a key feature of human world modeling: fragmenting information into abstract domains
before global integration.
Introduction
In our lives, we encounter a wide range of situation s with complex and ever-changing properties
– spatial, temporal and social. To understand and predict future events, we form internal models
of our experiences. A well-tuned internal model 1–4 allows us to interact with the world optimally
by generating future predictions 5,6. Understanding how these models are structured and
represented are central questions in cognitive neuroscience . A hallmark of cortical computation
is the prevalence of functionally specialized modules geared towards processing specific kinds
of information 7,8. This may be because different types of environmental variables r equire
different kinds of inductive biases 9 for efficient computation. For example, relational prope rties
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
like reference frames are better captured by graph structures whereas, temporal characteristics
of action sequences might require a more sequential structure. Different domains thus may
necessitate different prior constraints , and successful generali zation requires getting these
constraints right 10. Organizing world knowledge efficiently11–13(e.g. cognitive map ) might
therefore require a modular approach to internal model construction, leveraging domain-
appropriate inductive biases. Introducing such modular principles has also been shown to
enhance artificial learning systems14,15. Yet it is unknown whether humans acquired an assembly
of many separable and highly specialized models, each representing a world domain, or a more
unified global representation. Modular representation of internal models through parallelization of
domains would, however, create a coordination problem: how are the contents of these distinct
models unified to provide coherent behavior, let alone our integrated experience of the current
properties of the world16?
There are strong computational reasons to assume that humans possess multiple distinct
cognitive maps11 or model spaces17, specialized for particular domains of the world. In this study,
we introduce three such models, tuned to different domains of the world: states, agents and
actions (illustrated in Fig 1a). First, navigating a complex world requires an accurate
representation of one's current environment. However, it may not be possible to obtain (or
observe) all the variables required for this, requiring strong background information ( e.g.,
memory). A mapping between prior knowledge and observed sensory information un derlies the
inference of the environmental state. These states provide abstract contexts to situate events
and are crucial for accurate future state predictions and learning; their absence can bias
inference18.
Representing these abstract Spatial or State models, is necessary but insufficient for a full world
model. This is because states are populated by other people (or generally agents) who each
adopt a different reference frame, and thus form distinct goals and perspectives. Modelling these
Reference
frames are crucial to represent the mental states, beliefs and intentions of other agents,
ourselves and any interactions. These Agent models, may then be represented quite separatel y
to state representations. This facilitates perspective taking and simplifies joint inference across
various combinations of states and agents. In group settings, that form a large portion of human
life, accurate representation of relational properties of each agent to oneself and others are key.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Third, for a given State and Agent -reference frame, the space of (abstract) transitions or paths
one might take through them are vast. Thus, separable representation of temporally abstract
actions, or Action mode ls allows the mapping of previously learned action path onto newly
learned states or agents. In sum, we suggest three core abstract domains of cognitive
representation are needed – States, Agents, and Actions. Each operate s on different sources of
information about the world. They depend on one another, but generate distinct predictions about
the unfolding environment. The errors in each domain demand a fundamentally different kind of
update, requiring a modular architecture. Thus, a neural specialization for these domains allows
fast and flexible inference7,8 to the near -infinite permutations of contex ts, people and plans that
we encounter in our lives.
Different sectors of midline prefrontal cortex are sensitive to such properties of world, making this
cortical territory a likely site fo r specialized world models (Fig 1 a). State model estimation have
been extensively shown to be centered around the ventromedial prefrontal cortex 19, w hich
encodes them as cognitive maps 20 or low -dimensional schemas 21. This region is also heavily
associated with reward processing, however newer perspectives suggest these effects stem from
a more general function of state estimation 22. Sitting dorsal and anterior to vmPFC, the
anteromedial prefrontal cortex is heavily involved in social cognition, theory of mind 23,24, social
hierarchy learning25 and goal processing 26. All of these activities require referential modeling27,28
and computing goals (self/others). Further dorsal and posterior, the dorsomedial prefrontal cortex
is critical for (high -level) action planning 29, strategic decis ions30, and formulating hierarchical
plans31, all of which fall under the notion of modeling temporal properties over longer time -scales.
Taken together, it is appealing to position this triumvirate of regions as the core model space
within the midline prefrontal cortex. These also form the anterior nod es of the Default -Mode
Network (DMN), which is thought to process internal models of experience12,13,16,32.
As mentioned above, a modular architecture creates the challenge of integrating different
predictions together into a unified format and merging top-down priors with sensory data.
Precuneus, the core node of DMN 33 is in a strategic position to meet this demand due to its
hypothesized role in global integration 34, interfacing with other cortical networks and being a
sensory hub 16. Lesions to this region often lead s to integratory deficits 35,36. We propose the
Precuneus is where distinct prefrontal predictions relatin g to states, agents and actions are
combined. Integrating these with sensory data allows the brain to maintain a coherent, unified,
and up-to-date model of its physical and social environment.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
In this study, we test this proposal: that the midline PFC regi ons operate as a partitioned domain-
specialized, tripartite model space. This system generates top-down predictions from each model
in a parallel, independent manner. We focus on p rediction errors; moments when a n aspect of
one's current world model is inaccurate and thus updated. One would expect brain regions
supporting a particular domain to show increased activity during such updates. Folding this notion
onto three distinct model s means different kinds of errors trigger updates to unique parts of the
world model. We hypothesize that these predictions are then integrated in the Precuneus, thus
outfitting the DMN with a modularization within its prefrontal sectors , allowing for hierarchical
computation within the network.
We explore three fundamental questions about internal model representation using fMRI data
collected while participants watched a short movie, where all three domains are intermingled. We
collected behavioral data from a different sample of participants watching the movie to determine
when people generally updated their beliefs about states (movie situations), agents (movie
characters) and actions (what transpired). Using these updates as predictors of neural activity, we
investigated whether humans possess a single global representation of the world model or a
modular, domain -specific organization. Next, through hidden Markov modeling, we explored
whether region -specific neural transitions coincided with subjective belief changes. Third, we
tested whether these domain-specific predictions are integrated within core DMN by analysing
shared connectivity profiles. Finally, w e replicated ou r key findings in a second dataset that
involved a different sensory modality (a spoken story) and level of emotional content. Our results
specifically outline how the human prefrontal cortex performs domain -specific world modeling
and, more generally, how the DMN integrates these to shape our subjective experience.
Results
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Fig 1: Fragmentation of World Models. a. Any experience can be divided into models of states (abstract
contexts), agents (others' beliefs/goals), and actions (temporal paths through state space). The midline prefrontal
cortex can be viewed as assembling such a model space, configuring the best model for each world abstraction. It
generates top -down predictions in a tripartite organization, with domain -specific belief updates recruiting each
region selectively. In this example, upon visiting a friend's home for lunch, you notice their ki tchen is a mess. This
contrasts with your expectation , prompting a state update from 'clean' (State 2) to 'messy' (State 1). You observe
the friend's apparent unhappiness during cleaning, possibly due to not offering help (Agent frame 1) changing your
representation of their mood (Agent frame 2). Consequentially you consider alternative dining options than eating
in, e.g. grabbing food from a nearby food truck (Action path 1) or restaurant (Action path 2). The experience itself
appears fused but its deeper compositionality is implicit in the narrative structure of human experience (and later
memories). b. Design schematic for obtaining belief update time -courses by aggregating reported updates over
multiple participants. c. Smoothed, group -level belief update time-courses peaking when participants signaled
their predictions were being updated in each domain. (Inset) Movie montages show examples of scenes during
different domain-updates. d. Interrater reliability in update time- courses computed through split-half correlation.
Our approach was to use fMRI data from young participants (n=111) passively watching a
short movie “Bang you’re dead”, taken from the Cam -CAN project 37. We obtained
continuous belief -update (prediction updates) time -courses for this movie from separate
groups watching online and use this for our analysis of the neuroimaging participants' BOLD
data. Later, we generalize the main results to a separate cohort listening to a story 38 (n=52)
while undergoing scanning, using the same methods.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Measuring Belief Updates in State, Agent and Action models
Our analysis approach is to identify changes in neural activity, patterns and connectivity
and, assess whether these coincide with subjective markers of internal model updates of
movie content in each domain. We first probed when belief updates typically occurred in
each domain, during the movie. Participants from three independent groups watched the
movie and pressed a button whenever they felt their beliefs were updated in one of the three
domains (Fig 1b) . Briefly, these were contextual updates 39 (for States; n = 18), belief
updates about people (for Agents; n=21) and belief change due to an action taken , that
could affect the trajectory of the movie (for Actions; n=19) (see Supplementary table 1 for
complete instructions). Update time-courses from individual participants were combined and
smoothed to give a continuous time -course (Figure 1c). Higher values indicate a greater
proportion of individuals watching the m ovie marked a belief update at that point. These
time-courses indicate that the predictions (and the experience) of each domain fluctuate
considerably throughout this movie. By collecting these ratings in separate groups of
participants to those who provided the fMRI data, we ensured that the fMRI data reflected
processing of a fully naturalistic experience, free from instructional , meta -monitoring and
responding effect s. Group-level ratings were only weakly correlated with one another
(States vs Agents, r = 0.31, Agents vs Actions, r = 0.29, Actions vs States, r = 0.28). This
indicates that models in different domains were being updated at different times during
movie-watching. We also conducted a split-half correlation analysis for each rating, which
indicated generally good levels of agreement between participants in the timing of updates
(Fig 1d) (States r = 0.80, Agents r = 0.49, Actions r = 0.57, see Methods).
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Topographically distinct Internal Models in the Midline
Prefrontal Cortex
Fig 2: Fragmentation of Predictions in Prefrontal Cortex. a. Whole brain maps (p<0.05 FDR corrected) show
a topographically distinct segmentation in the midline prefrontal nodes responding to revisions of predictions in
Actions (top), Agents (middle) and States (bottom) domains. Warm colours indicate positive effects for each domain
relative to the other two, and cool colours denote negative effects. b. ROI analysis confirming a domain -specificity
within these regions. c. Intersubject correlation (ISC) rev eals that, in each region, activity is more synchronized
across participants during updates in that regions’ preferred domain.
Our neuroimaging analysis began by identifying activations that were parametrically
modulated by each domain -specific belief upd ate. Updates involve revision and
reconfiguration of the current internal model. Thus, these are periods where we would
expect heightened processing demand when regions representing domain -specific model
content should show increased activity. To test this , all three smoothed update probability
time-courses (Fig 1c) were used to simultaneously predict neural activity. We then
contrasted effects of each domain against the other two, allowing us to tease apart whether
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
the regions were particularly involved in each type of belief update.
Whole brain maps (Fig 2a) revealed a topographically distinct activation profile in the
midline prefrontal sector. vmPFC activity was most strongly correlated with State updates,
amPFC with Agent updates and dmPFC with Action updates, in line with our hypothesized
model space. A further ROI -level analysis (Fig 2b) was conducted on the effects of each
predictor (beta values) in each region, using anatomically defined ROIs derived from the
Brainnetome atlas40 (Supplementary Figure 1). This analysis showed that the BOLD
response to State updates was significantly higher in vmPFC than either amPFC or dmPFC
(vmPFC > amPFC, t = 8.2548, p -value = 3.693e-13, d = 0.78, vmPFC>dmPFC, t = 5.1039,
p-value = 1.404e -06, d = 0.48), while effects of Agent updates was highest in amPFC
(amPFC > vmPFC, t = 4.0458, p-value = 9.718e-05, d =0.38, amPFC > dmPFC, t = 4.9594,
p-value = 2.591e-06, d = 0.47) and Action updates highest in dmPFC (dmPFC > vmPFC, t
= 5.0828, p-value = 1.536e-06, d =0.48, dmPFC > amPFC, t =3.5133, p-value = 0.0006434,
d = 0.33). These results suggest a topogr aphically distinct pattern of effects within the PFC
for different kinds of model updates. That is, different PFC regions responded to different
types of prediction updates during naturalistic experience. The scanning cohort had no
instructions to watch the movie in any special way. Yet they showed our predicted
separation in the PFC when revisions of beliefs occurred (as indicated in the ratings of
independent groups of participants).
Domain-specific increase in Prefrontal Shared Activity
during prediction updates
The activation effects suggest that specific PFC regions show heightened processing in
response to domain-specific belief updates. But this does not confirm that these effects
are truly driven by the movie stimulus alone (rather than stimulus-unrelated internally
driven thoughts). In naturalistic neuroimaging paradigms, synchronization in the temporal
profile of activity across participants is often used as evidence that a region is engaging in
stimulus-driven processing41. If these regions are indeed generating top -down predictions
then periods of belief update should also have particularly high levels of synchronization,
i.e., increased shared response across participants. This is because all participants should
update or calibrate their predictions in response to events in the movie in similar ways.
To tackle these arguments rigorously, we took a principled approach to the update ratings,
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
that stayed constant in all further analyses unless specified otherwise. From the group -
averaged time course, we only took the updates that crossed a specified threshold (θ), for
each rating. We used θ as 2 SD here (see Method for details). The underlying logic being,
since model updates are a subjective judgement, there is no consensus as to what exactly
is an objective update (no matter how many raters are present). At the same time, an
update that is most prevalent across raters would have the highest likelihood to be present
during the experience shifts ( i.e., prediction updates) of the movie -watching cohort. This
ensures that 'base rate' of updates for each domain are respected and , only those updates
that were widely shared across the cohort are analyzed.
We then calculated the intersubject correlation (ISC) values 41 for these update periods, in
our three PFC regions. ISC values were obtained by constructing a 7 TR (scan) window
around these time points. These update segments were concatenated and ISC computed
on this one long segment, for each participant.
We predicte d that in each PFC region, ISC would be higher during its preferred domain’s
updates relative to other domains. We used a hypothesis driven Bayesian hierarchical
regression42,43 to test this (see Methods).
We found strong evidence (Fig 2c) for these regions being synchronized in a domain
specific-manner across participants. In State updates, ISC showed strong eviden ce in
favor of vmPFC showing higher ISC than dmPFC (vmPFC>dmPFC Estimate = 0.16, 95%
CI 0.11-0.21, BFfor >150, P = 0.99) and amPFC (vmPFC>amPFC, Estimate = 0.03, 95%
CI -0.01 - 0.08, BFfor = 7.35 P = 0.88). Similarly, in Agent updates, amPFC had more ISC
than vmPFC (amPFC>vmPFC, Estimate = 0.03 95% CI -0.02 - 0.07, BFfor = 4.81, P =
0.83) and dmPFC (amPFC>dmPFC, Estimate = 0.04, 95% CI 0 - 0.09, BFfor = 15.39, P
= 0.94). Finally, in Actions updates, there was evidence for dmPFC being higher than
vmPFC (dmPFC>vmPFC, Estimate = 0.11, 95% CI 0.06 - 0.17, BFfor >150, P = 0.99) and
amPFC (dmPFC>amPFC, Estimate = 0.04, 95% CI -0.01-0.09, BFfor = 12.02, P = 0.92).
These results indicate a topographically tripartite profile in midline PFC that showed
domain-specific increase in activation and shared -response during moments of stimulus -
driven belief updates.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Prefrontal Neural Transitions track Experienced Belief
updates
Fig 3: Discrete Neural Transitions Precede Subjectively Experienced Belief Updates.
a. Using Hidden Markov Models, we identified neural transition points within an ROI during the movie (top row).
We then compared the timing of these transitions with the belief updates by counting how many updates
occurred within different time windows (TRs /scans) following these neural transitions. This varied from 0 to 8
scans. As the window length increases (light grey to black), more belief updates are naturally included. However,
the critical prediction is that each region’s transition windows will contain more updates from its preferred
domain than from the other domains. b. Proportion of belief updates that fall within neural transition windows in
each PFC region, for various window sizes. (Top) dmPFC neural transitions are most closely aligned with Action
model updates, while amPFC (middle) and vmPFC (bottom) transitions capt ure more Agent and State updates
respectively. (Asterisks denote window sizes where p<0.05)
The previous analyses revealed increased activity when participants updated their
predictions and consequently showed an increased shared-response in the PFC.
Updating one's current internal models would involve rebuilding the model representations
on the fly leading to newer interpretations and experience of the ongoing stimuli. If such a
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
model rebuilding occurs, then each update should also be associated with susta ined shifts
to the prefrontal neural dynamics of the ongoing experience. The signatures of this could be
extracted from the BOLD latent dynamics/transitions. To test this, we used Hidden Markov
models (HMMs) to identify transitions in the neural activation states of each PFC region.
We then tested how well these transitions aligned with belief updates in the domains of
State, Agent and Action.
Hidden Markov models are well -suited to tackling such problems in cognitive neuroscience
and has been successfully applied onto naturalistic stimuli 12,13,43. We deployed a HMM (see
Methods) designed to be highly resistant to the timing of participant update variability. We
did this by exhaustively bootstrapping and model -fitting across participants over a range of
possible latent states and, selecting the most statistically efficient number of states. The
final HMM, configured with this number of states, was then estimated multiple times,
averaging the latent state transition time points producing a transition ti me-course for each
ROI. We only used the most reliable and consistent update points for a rigorous
comparison (see Methods). We aimed to identify which type of belief update most closely
aligned with neural state transitions in each PFC region. To do this, we counted the belief
updates occurring immediately after a neural transition, using various TR /scan window
sizes (Figure 3a).
Fig 3b shows the proportion of belief updates that occurred immediately after neural state
transitions in each PFC region, for a range of temporal window sizes. Strong domain -
specificity was observed. vmPFC transitions captured State updates more than Agent or
Action updates, amPFC was most attuned to Agent updates and dmPFC showed a
preference for Action updates. These effects w ere largely consistent across the size of the
temporal windows used, but tended to be statistically significant when using longer
temporal windows. This suggests that the subjective experience of an update to
predictions occurs sometime after the neural model is reconfigured.
These results emphasize that discrete shifts in the prefrontal neural dynamics coincided
with updated model predictions , preceding the experienced belief updates. Three
separate internal models in the prefrontal cortex appear to mediate these shifts in three
key domains during unguided naturalistic experience.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Precuneus selectively integrates updated Prefrontal
Representations
Fig 4: Prioritized Integration of Prefrontal Predictions within the Precuneus.
a. Posterior estimates of different forms of functional integration. Precuneus had more shared functional
integration (ISFC) during the belief updates with each of the domain - specific PFC regions. Bayes factors showed
more evidence (see text) for such a within-DMN functional integration than an integration within the PFC ( Within
PFC) or with Hippocampus (PFC-Hippocampus). b. Pattern-level Integration. Inter -subject pattern correlation
(ISPC) was computed by correlating voxel patterns at each time point in the movie across participants. This
provides a time -course of shared patterns for different ROIs. c. During moments of updates, pattern
representations in the PFC suggests new predictions. An increased correlation of the time-course between a
PFC region and another ROI (here Precuneus), during the update suggests functional coupling on the
representational level. If an ROI has high similarity selectively with each of the PFC region for its domain -update,
then it integrates new prefrontal representations in a prioritized, multithreaded manner. Threading here refers to
switching between multiple prefrontal prediction threads. d. Bar plots show correlation strength of each region’s
ISPC timecourse during updates with that of the Precuneus. (Top) dmPFC displaying higher similarity with during
Action updates than other regions. (Middle) amPFC showing more similarity than other two during Agent updates
and (bottom) vmPFC showing similarly specificity with Precuneus during State updates
So far, we have provided evidence consistent with our hypothesis that internal world
models relating to States, Agents and Actions are represented in distinct regions of PFC.
How do prediction threads from these simultaneous yet spatially distinct systems get
integrated and distributed globally?
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
There are two distinct subproblems here. First, prefrontal model contents must be unified
to form a global representation of the current state of the world. This can occur withi n the
PFC, or outside it. Second, these integrated representations must be used to constrain
processing of incoming sensory information in other parts of the cortex.
Functional integration of updated predictions across domains may happen in several
ways. First, a decentralized manner within the Prefrontal cortex, suggesting coordination
driven by anatomical proximity. Second, centralized integration with the Hippocampus,
leveraging its extensive connectivity 44. Third, network integration in DMN 16,45, with the
Precuneus playing a pivotal role due to its integrative dynamics 16,33,35 and network
centrality34.
To explore the se potential integration mechanisms, we utilized intersubject -functional
connectivity45,46 (ISFC) analysis between domain -specific PFC regions and other ROIs
during belief updates. ISFC is particularly effective in naturalistic paradigms as it remov es
stimulus-unrelated connectivity influences. This allowed us to measure and compare how
updated prefrontal representations integrate. Using a similar approach to the earlier ISC
analysis, we assessed the correlation between each PFC region and other regions during
update periods for its preferred domain (e.g., during State updates for vmPFC). We
correlated each PFC region with (a) Hippocampus, (b) Precuneus (PCN) and (c) other PFC
regions. Employing a Bayesian hierarchical regression, we then compared posterior
evidence for each integration hypothesis: within- PFC, PFC-Hippocampus and PFC-PCN.
We found evidence (Fig 4 a) for high er functional integration between PFC nodes and
Precuneus than the other two forms of integration during updates. State updates showed,
vmPFC having more integration with PCN than the other regions (PCN-vmPFC>HPC-
vmPFC Estimate = 0.03 95% CI 0.01 - 0.05, BFf or = 216.39, P = 0.99 & PCN -
vmPFC>within-PFC Estimate = 0.2 95% CI 0.18 - 0.22, BFfor >1000, P = 0.99). Similarly,
in Agent updates, amPFC showed more evidence of integrating with PCN (PCN-
amPFC>HPC-amPFC Estimate = 0.06 95% CI 0.04 - 0.08, BFfor >1000, P = 0.99 &
PCN-amPFC>within-PFC Estimate = 0.16 95% CI 0.14 - 0.18, BFfor >1000, P = 0.99).
Finally, Action updates had dmPFC displaying more integration with PCN (PCN -
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
dmPFC>HPC-dmPFC Estimate = 0.08 95% CI 0.06 - 0.1, BFfor >1000, P = 0.99 & PCN-
dmPFC>within-PFC Estimate = 0.09 95% CI 0.07 - 0.11, BFfor >1000, P = 0.99).
Moreover, the model could account for a fairly large variance in the data (Bayes adjusted
R2 = 0.85).
The above results suggest prefrontal representations are integrated with in the Precuneus.
This is not surprising given the high connectivity between these regions. However, it is still
unknown how exactly this integration is carried out within the DMN. Specifically, in our
design, how are these updated top-down representations unified and integrated with sensory
data? The Precuneus is in a position to achieve this due to its anatomical proximity with
visual cortex and functional coupling with the prefrontal sectors.
Given the parallel nature of the domains the Precuneus likely ha s access to all running
prefrontal prediction threads. This is helpful if sensory evidence required only one domain
to be updated, while (mostly) keeping the other two untouched. For instance, upon finding a
restaurant closed, one might update the action strategy without changing the reference
frame of wanting food. We hypothesize that integration in the Precuneus follows similar
logic, prioritizing updates to representations with in the relevant domain of the PFC. Since
this involves accessing and switching between multiple running prediction threads, we term
this Multithreaded integration. This interpretation allows us to directly test if such a form
of functional integration is occurring on the neural representations during the updates.
To test this, we utilized intersubject spatial pattern correlation 47 (ISPC). This measure is
the spatial equivalent of the ISC measure used earlier. It indexes the degree to which
the pattern of activation across the voxels in a region is similar across participants in
time (Fig 4b) . By computing ISPC in Precuneus for each TR, we can construct a time -
course of shared patterns across participants. High ISPC values indicate similar shared
(stimulus-driven) neural representations. During update time -points this suggests updated
prediction representations in the PFC. If Precuneus performs a global integration role, then
we would expect its ISPC dynamics to resemble those seen in different PFC regions in a
domain-specific manner (Fig 4c). Around State u pdates, we would expect the Precuneus
ISPC timecourse to be aligned to that of vmPFC, since these regions should be
engaged in processing State-related changes. For Agent updates, it should be most similar
to amPFC and for Action updates, to dmPFC. Th us, we tested the correlation between two
regions' ISPC values during belief updates of each type.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
To examine this, we computed ISPC timecourses for all regions and computed
correlations between them for different segments of the movie. During State updates,
vmPFC ISPC (Fig 4 d bottom) was more correlated with Precuneus ISPC than amPFC
and dmPFC (p < 0.001). For Ag ent updates, amPFC ISPC (Fig 4 d middle) displayed
stronger correlations with Precuneus ISPC than vmPFC and dmPFC (p < 0.001). Action
updates elicited higher dmPFC ISPC (Fig 4 d top) correlations with Precuneus ISPC than
vmPFC and amPFC (p < 0.001).
These results indicate that the representational dynamics of precuneus resembles that of
different PFC regions at different points during the movie, with the resemblance
determined by which domain is currently engaged in model updating. To determine the
specificity of this result, we performed similar analyses comparing PFC regions with visual
cortex, Hippocampus and with other parts of the DMN: Angular Gyrus, Middle Temporal
Gyrus, Retrosplenial Cortex and Posterior Cingulate (Suppl Fig 7-12). None of these
regions showed the same domain-specific changes in ISPC correlations with PFC
regions, suggesting that the global unification of multi-domain prefrontal predictions here is
specific to Precuneus.
Precuneus integrates updated Representations with
Sensory Regions
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Fig 5: Sensory regions synchronize more with Precuneus than PFC during belief updates
Intersubject functional connectivity (ISFC) between whole -brain voxels and a. Precuneus seed, and b. domain-
specific PFC seed (for its domain). Values suggest an increased visual cortex functional connectivity with
Precuneus than PFC. Maps are visualized at (r > 0.1, p<0.001). (Top) Action updates (Middle) Agent updates
(Bottom) State updates.
The above r esults suggest that Precuneus selectively unifies the updated prefrontal
representations. We hypothesize that it integrates these predictions to form a unified
world model. This is then used to influence and constrain processing in sensory and
associative regions, also shaping the ongoing subjective experience of the movie. No
other node of the DMN, nor key sensory regions, showed the same pattern of domain -
selective similarity with PFC . Thus, the Precuneus appears to be in a unique position to
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
integrate top-down predictions with the sensory stimuli processed throughout the cortex
during these updates.
To test this idea, we took the time periods when updates occurred using the same
approach as the preceding analysis and performed a seed -based ISFC 41,46 analysis for
each domain.
Connectivity maps (Fig 5a) show activity in the Precuneus was correlated with
sensory regions (Visual Cortex) during updates in each domain. In contrast, domain-
specific Prefrontal nodes showed less connectivity with visual regions (Fig 5b) . Whether
seeing in the Precuneus or PFC , coupling with a unique set of networks specific to a
domain occurred; Hippocampal/Parahippocampal regions during States, Tempor o-Parietal
junction and Anterior Temporal lobe for Agents, in addition to other heteromodal and
associative regions. When combined with the previous analysis, these results indicate
Precuneus is highly coupled with both the prefrontal top-down predicting r egions and
bottom-up sensory information. This suggests a role for integrating both of these, during
belief updates, shaping the ongoing subjective experience.
The results so far are broadly consistent with our conjecture. The midline PFC represents
the wo rld in a modular way, fragmented into three domains, actively generating and
adapting predictions of it. These separate classes of predictions are then unified and
integrated with sensory regions by the Precuneus. Such a network -level process hints to
the Precuneus as a hub having access to the integrated form of prefrontal predictions.
Thus, this region could potentially be an important neural correlate of unified subjective
experience.
Integrated representations in the Precuneus track ongoing
subjective experience
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Fig 6: Precuneus Unifies Fragmented Predictions into Global Experience. a. Neural transitions analysis
applied on Precuneus and PFC regions included transitions linked with periods of heightened Arousal, a measure
of global experience. Arousal shifts was captured much more than each of the belief updates. PFC regions do not
capture Arousal more than their specialized domains. b. Correlation between Arousal and Group-averaged ISC
time-courses showing Precuneus having larger correlations (r = 0.75), than dmPFC ( r =0.22), vmPFC ( r =0.58)
and amPFC (r =0.60) c. Correlation between Arousal and participant -level ISC time-courses. Precuneus had more
correlation than each of the PFC subregions. d. Relation between Pred ictions and Experience. Scatterplot shows
average functional connectivity between PFC and Precuneus (integration of prefrontal predictions across all
domains) during updates correlated with the whole -movie Precuneus ISC (movie shared experience). Dots
represent individual participants.
Integration of top -down predictions with bottom -up sensory information is key for a unified
current model of the world. Since the Precuneus connectivity seems to suggest this
integration occurs here, we predicted that this region would have a unified representation of
the movie experience.
Previous studies have observed that this region had similar representations which were
relatively higher than other cortical regions, during movie watching and subsequent recall, for
both w ithin and across participants 49. This suggests the experiential changes due to the
movie might be reflected in i ts neural dynamics. We used emotional Arousal ratings as our
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
measure of overall movie experience. People experience high arousal around moments
when they have high uncertainty that change their understanding of a situation43. Therefore,
we used levels of emotional arousal as a proxy for the degree to which participants are
engaged with the unified experience of the movie.
First, we repeated our bootstrapped HMM analysis, inv estigating whether neural state
transitions coincide with times when participants experience high Arousal. We predicted
that Precuneus would show neural shifts linked with high arousal moments, while
transitions in the prefrontal regions would be more spec ific to their respective domains (as
shown previously). Other than setting the threshold θ to 1 SD for Arousal (due to no
points surviving at 2 SD threshold we previously used; see Methods), the exact same
procedure was applied here.
We observed that periods of high arousal captured a strikingly large proportion of neural
state transitions in the Precuneus, more than periods of domain -specific belief updates
(Fig 6a, top) . This difference was significant throughout all the temporal windows used to
model updates/high arousal. Crucially, none of the prefrontal regions showed transitions
that coincided with Arousal in the same way. Instead, each PFC region’s transitions
coincided with updates in its specific domain (Fig 6a) . The precuneus effect persisted
when we used an alternative definition of high arousal (times where arousal was greater
than mean arousal, rather than more th an 1 standard deviation higher than the mean)
(Suppl Fig 6).
Next, we obtained a dynamic intersubject correlation time -course41 (sISC) for Precuneus
and compared the Arousal time series to this. This analysis uses a sliding window to
compute ISC at each point in time, thus providing temporal information about shared,
movie-driven activity. If a region is tra cking the unified experience, then it should correlate
more with Arousal, compared to regions carrying only the fragmented experience.
Precuneus showed more correlation with Arousal than each of the Prefrontal subregions on
participant-level (Fig 6c) (PCN vs vmPFC t = 2.8342, p-value = 0.005467, d = 0.27, PCN
vs amPFC t = 2.4467, p-value = 0.016, d = 0.23, PCN vs dmPFC t = 5.1409,
p-value = 1.198e -06 d = 0.49). Group -level time courses (Fig 6 b, top ) showed strong
correlations between Precuneus (r = 0.75, p = 1.62e-31) and Arousal, more than each of
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
the prefrontal regions individually (Fig 6b) suggesting its representations are unified and
covaries strongly with subjective experience. (vmPFC r = 0.58, p =1.29e -16, amPFC r
=0.60, p =1.12e-17, dmPFC r =0.22, p = 3.95e-03).
Similar Predictions Accompany Similar Experience
We further explored the relationship between the integration of prefrontal predictions in
the Precuneus and individuals' shared experiences of the movie. This was prompted by
findings that suggest a close relationship between Precuneus ISC and experienced
arousal dynamics. Specifically, we hypothesized that individuals with similar integration of
prefrontal predictions in the Precuneus would share more similar experiences than those
with different integration profiles. To test this, we correlated the average ISFC b etween the
Precuneus and each PFC region during updates with whole-movie Precuneus ISC (Fig
6d), which showed a significant correlation (r = 0.54, p = 1.4e -09). While various unknown
factors may influence shaping experience, placing this alongside our broa der results
suggest that similar levels of prediction integration are associated with comparable shared
experience.
The picture emerging suggests that the Precuneus unifies prefrontal predictions with
bottom-up sensory data into a coherent, continuously ev olving experience during
unguided natural settings.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Generalization to Spoken Narratives, Input Modality and
Emotional Content
Fig 7: Fragmentation and Multithreading is independent of sensory modality or content. a. Whole brain
maps (p<0.05 FDR corrected) show a topographically distinct activation in the midline PFC to revisions of
predictions in States (bottom), Agents (middle) and Actions domains (top) during spoken narrative processing. b.
Domain-specific integration between Precuneus with vmPFC during States and amPFC during Agents, but not
with dmPFC during Actions (compare with Fig 4d).
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Are these results limited to this movie's content? More importantly, is this result limited to
the visual modality? To test this, we replicated our two central results - modular prefrontal
predictions and integration with the Precuneus - on a different cohort process ing a
spoken narrative. The narrative was similar in duration to the movie (8min vs 9min) but
involved dramatically different content and emotional -valence (humorous c .f. the
suspenseful content of the movie). Most importantly, it was presented as spoken audio.
This allows us to assess generalizability of our claims across people, content, sensory
modality and emotional salience (and a different pre-processing pipeline, see Methods).
We first tested for activity covarying with State, Agent and Action belief updates. Whole
brain maps show remarkably similar prefrontal fragmentation while listening to a spoken
narrative, suggesting that these prefrontal modules fragment different types of experience
in a highly consistent manner (Fig 7a).
We then compared whether shared patterns during updates in the PFC (via ISPC time -
courses) showed domain-specific alignment with the Precuneus ISPC. We found
evidence of multithreaded integration in States (p = 0.01) and Agents (p = 0.001), but not
in Actions (p = 0.225). This suggests integrated predictions in the core DMN are modality -
agnostic and emotion -neutral i.e., abstract (Fig 7b). unlike in the movie data, here we did
not find that precuneus ISPC was most correla ted with dmPFC during Action updates. This
could be because there were fewer characters in this story (two, one of whom narrates).
This may put less demands to model potential courses of action independently of the
agents making it harder to detect effects in this domain.
Overall, this replication addresses potential limitations of using a movie stimulus and
provides for an independent validation of some of the main results. In doing so, this
cements our claim that humans utilize a set of modular predictiv e models in vision and
language inference during general world modelling.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Discussion
Inductive biases offer useful and computationally advantageous prior knowledge in
structuring internal models 10. By analyzing prediction updates across different domains
during naturalistic experience, we uncovered how humans might utilize such biases to
represent different internal models. We suggest that humans model the world by
partitioning it into three distinct domains, within the PFC. Each model occupie s a
topographically distinct portion in the midline PFC. Our analyses of fMRI movie -watching
data suggest that t hese three parallel neuronal syst ems adaptively guide predictions for
each domain; namely, States, Agents and Actions. We found evidence that these top-down
predictions are then unified in the Precuneus, the posterior hub of DMN. We propose that
Precuneus continually integrates top-down predictions with bottom-up sensory information
to form and update the current model of the world. These results also generalized from a
movie to spoken narrative with very different content. This illustrates how the DMN
contains modular representations of abstract predictive models.
Our results support our proposal that the joint world modelling process is divided into
dedicated modules of States (Spatial), Agents (Referential) and Actions (Temporal)
models. Domain activation profiles distinctly mapped to a ventral-dorsal gradient in the
midline PFC. These roles align with insights from various lines of work 18–30. However, to
our knowledge they have not been previously integrated into a unified th eoretical
framework, localising them to prefrontal cortex. First, the vmPFC, traditionally associated
with reward learning and decision -making, appears to play a broader role in context -based
inference. In our study, the vmPFC responded to context changes within the movie. In
more goal-directed situations, relevant states might relate to task instructions or the reward
value of different stimuli. This supports the theory that State estimation is a core
function of the vmPFC 18,19,22. We generalize this notion into a model space of States
encoded within this region. Here vmPFC not only tracks but also generates predictions
about various States in the environment , updating these predictions as necessary to
navigate experiences.
The amPFC plays a crucial role in various forms of complex social cognition23–25. Central to
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
these functions is the ability to construct reference frame models of Agents, enabling
generalizations to new or familiar individuals across varying contexts. As a social species,
our understanding of the world would be dangerously incomplete without having robust
models of the people around us. This allows us to anticipate their emotions and behaviour
accurately. In the present study, amPFC activity was coupled with updates in beliefs about
the characters in the movie. However, amPFC is also highly engaged in reasoning about our
own (future) mental states, suggesting that agent models also guide interpretation of our
own motivations and behaviours 16,26–28. It’s important to reiterate, that agent and state -
based predictions are often orthogonal. Individuals exhibit personality traits that are stable
across various contexts, and environments possess characteristics that remain consistent
regardless of the inhabitants. This orthogonality makes it computationally sensible to code
State and Agent predictions separately.
Managing a vast state space requires abstracting ways of transitioning, or paths across it.
This allows us to navigate through various states to achieve different goals. Modeling
temporal properties that evolve over extended periods is crucial for this. Th e dmPFC, our
Action model space, plays a critical role in strategic decision -making30, hierarchical
planning31, and compressing action sequences over time 29. Th ese functions are vital for
encoding and inference through abstract Action models, where specific actions trigger
particular paths or sequences. These models are built and represented separately to
underlying reference frames (coded by agent models) or the contexts (coded by state
models) in which they occur. In our study, a change in State or an Agent's behavio ur
triggers an update in the possible trajectories within the inferred story. This requires
adjustments to the predicted 'paths' across States or fu ture agent behaviors. The ability to
generalize actions provides significant advantages in adapting to new goals and
compositionally reusing model components elsewhere, a key aspect of human flexibility.
Our data make a case for top -down predictions also arising in a parallel, distributed manner
akin to bottom -up sensory pathways. Taken together, our data indicate that PFC is a core
region from which top -down model predictions can arise. Importantly, it also suggests that
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
specialization across this region is a simple yet flexible adaptation used by the brain. This
strategy processes the continuous and incredibly high-dimensional world by 'carving' it
into distinct domains and separately computing predictions in each50.
If our world models are represented across three modular systems, then why does our
subjective experience of the world not feel similarly fragmented? Our results are consistent
with the idea that Precuneus unifies the prefrontal predictions, integrating them with
sensory data. This is not only a core node of DMN (of which Precuneus is perhaps the
central node) , but structural 34 and functional connectivity 33 data show that this region
interfaces between sensory regions and the PFC. It also acts as a connecting hub
between various cortical networks 33,34. Therefore, it is well -placed to play such an
integrative role. The shared representations in this region were selectively aligned to that
of each domain - specific PFC region, during their corresponding updates. Such a form of
prioritized multithreaded integration of prediction threads was observed to be unique to
Precuneus, compared to a host of other regions. Studies have shown the brain could
implement multithreading structurally 51 and that dopamine might be functionally integrating
multiple threads of reward prediction errors52. Maintaining complex unified representations
likely requires such parallel neural architectures53 and multithreadedness can be seen as
an adaptation to distributed errors. This leads to robust interareal communication, further
bolstering this region's increasing evidence in global integration16,36,46,48.
We also ruled out other forms of regional integration such as within -prefrontal and with
Hippocampus. Consistent evidence emerged for the Precuneus, whose activity was
attuned to discrete shifts and continuous cascades of the unified experience. Conversely,
the PFC was only selec tive to domain -specific shifts of experience. We found that
activation dynamics in precuneus aligned with ratings of emotional arousal, which index
temporally evolving, emotion -laden engagement with stimuli 43,54. The usually high
correlation values observed in this region across subjects in studies indicate shared
representations during shared experiences 49, a proxy for the stimulus -driven states of
experience. Such a fun ctional manner of integrating predictions into experience might also
underpin neural correlates of consciousness.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
A dominant question in consciousness research is to adjudicate between various neural
theories of conscious processing. Currently, a major the oretical debate is whether it is
prefrontal or posterior parietal zones that mediate access to conscious representations 55.
Our results suggests that the answer might be a holistic gathering of both PFC and the
Precuneus. Perhaps, PFC is required but ultimately generates an incomplete, coarse -grain
experience while parietal integration is critical for the final view. This was in line with our
Results
where individuals with similar prefrontal predictions integrated with the Precuneus
had similar shared global experience. As a consequence, it becomes difficult to falsify
competing theories that have neural implementation shared with each of these regions.
Indeed, such an ambiguous conclusion was observed in a recent adversarial experiment56
which pit these two theories against each another.
Alternatively, multiple, concurrent streams of consciousness are central to some
philosophical theories of consciousness 57. Here different neural modules can have 'control'
at different times. Implementing any theory into neuronal machinery to be called as a neural
correlate of consciousness (NCC), requires satisfying several different criteria 58. One such
criteria is the differentiation between global and local contents. Fragmented prefrontal
representations and their eventual integration within the Precuneus might be seen as a way
of differentiating these. Another constraint is that the NCC should be a systematically
specific form of conscious processing, rather than an arbitrary or spurious neural
association. In our framework, domain -specificity of these modules (e.g. conscious
updates to contexts vs people) satisfies such a requirement. Predictive processing
frameworks centered on different cortical networks seems to be a promising avenue to
explore here. Despite domain - specificity, these regions still responded in a remarkably
similar manner during updates to perceptually and emotionally different input. This suggests
that these representations are separated from the concrete textures of the sens es,
something the DMN is in a legitimate position to fulfill.
A rich literature of cognitive 12,13,16,43,45,46,49,59 and clinical studies 35,36,60 supports the role of
DMN in higher-order human cognition. Although classically seen as task-negative, this
network is implicated in a variety of cognitive activities associated with subjectivity, such as
mind-wandering, creative thought, self -related processing and mental time travel. These
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
tasks are inferential in nature and possibly involve construction of rich internal models of
experience. Episodic memories of expe rience are thought to be compartmentalized
through event segmentations, which are functionally driven by prediction errors 39,61. Our
data are consistent with this broad view and provide new insights into the underlying
mechanisms. The discrete neural transitions observed in the midline prefrontal sectors
offer novel investigative links here. One question is whether different aspects of episodic
memories (people vs places) are encoded in different ways 48. Fragmentation of
experience may be seen as a possible reason behind consequential clinical accounts like
blind-sight, spatial neglect 62, dissociative consciousness disorders, and in extreme cases
commissurotomy-related phenomenona63. Inability to integrate these prefro ntal predictions
can offer a fresh perspective in examining psychiatric conditions with independent (and
often rebellious) 'conscious' entities within. Indeed 'misintegration' by Precuneus, the hub
of DMN, are well reported in clinical studies underlying r elated phenomena 35,36. Finally,
there is a computational formalism of seeing resting-state DMN activity as the prior models
encoded in the cortex, under Bayesian frameworks 4,64. The present study is suggestive of
the dynamic processes and structural constraints by which these priors are updated as an
experience unfolds.
From a methodological perspective, one strength of our study is that o ur neuroimaging
participants were not give n any specific cognitive task to perform while experiencing the
story. Having them explicitly provide conscious ratings of their updates would have
changed their experience, evoking metacognitive/response-related neural signatures and
precluding a fully natural experience of the movie . Our design was specifically aimed to
detect naturally occurring predictive changes rather than perceptual changes, viewed
through the lens of an individual's internal model. This approach minimizes instructional
effects and o ffered a window into the nature of our internal models. Like most
neuroimaging studies, most of our analysis are correlational, exploiting the model
generation and updating processes that occur spontaneously during a naturalistic
stimulus. In future works it will be important to exert more experimental control over the
nature and timing of such processes, in order to validate our findings. That said, our
replication of the main results across two settings supports the value of studying internal
models using naturalistic neuroimaging, where a suite of specific an alytic techniques has
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
been established in recent years.
To summarize, we claim that humans model the world by fragmenting it into different
domains first – states, agents and actions . Each of these internal models, potentially
leveraging different kinds of inductive biases, are represented along a functionally distinct
topography in the PFC. Predictions threads from PFC are integrated within the Precuneus,
enabling the DMN to shape an d transform these into a unified subjective experience. Such
parallel, modular representations highlight the inevitability of distributed processing in the
brain. Through the broad framework of predictive coding and ecologically rich designs
we hope to have offered a novel and unificatory account of various phenomena associated
with the DMN, capturing its possible role in general world modelling.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Methods
Stimuli
We examined the behavioral and neuroimaging responses of participants to two
naturalistic stimuli –a movie and a spoken narrative - sourced from two different datasets.
The movie was an edited 8 -minute excerpt from Alfred Hitchcock’s “Bang! You’re Dead!”,
obtained from the Cam-CAN dataset37. In short, this movie involves a boy discovering
loaded gun and pulling the trigger at various unsuspecting people. It involves various shifts
in context and various beliefs about the characters, and their possible actions at each
juncture of the plot. For the narrative, we used an audio clip (9 min 7 sec) of "It’s Not the
Fall that Gets You" derive d from the publicly available “Narratives” dataset 38. It concerns a
self-narrated account of a person trying to date at a skydiving academy and the various
bloopers that occur. Both stimuli were chosen because they are linked with publicly
available fMRI data from their large samples and are well -studied in the existing literature.
Most of our analyses used the movie stimulus, while the data from the narrative served as a
replication dataset with different modality and content, establishing the generalization of key
results.
Participants
Our study comprised of 8 experimental groups – one fMRI and three behavioral for each
stimulus modality, with no overlap between them.
129 participants provided ratings of various aspects of the stimuli. 58 UK -based
participants (21 -35 years, Mean: 27.6, SD = 3.3, 47% females) were recruited via the
online platform Prolific to provide continuous belief update ratings, distributed into 3
separate groups – States (n=18), Agents (n=21) and Actions (n=19). Additionally,
continuous ratings of Arousal (n=17) were obtained from a previous study43.
Participants were demographically matched with the fMRI participants (UK residents aged
21-35). All participants were native English speakers and had normal or corrected -to-
normal vision and hearing. All participants reported no previous history of watching the
movie.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Similarly, prediction ratings on the narrative were collected from 3 independent groups
(21-35 years, Mean: 28.5, SD = 3.5, 44% females) of participants using Prolific, for States
(n=16), Agents (n=18) and Actions (n=20). The participants reported no previous history of
listening to the story.
The online rating studies were approved by University of Edinburgh School of Philosophy,
Psychology & Language Sciences Research Ethics Committee and all participants gave
written informed consent.
Neuroimaging data sources
fMRI data for the movie were obtained from the healthy population -derived Cam -CAN
cohort (N=135, Age:18-35 years).
Participants exceeding a maximum framewise displacement of 1 mm or angular rotation >
1.5° were excluded from subsequent analyses (see fMRI preprocessing) leading to a
sample of 111 participants (µage = 28.5 ± 4.93, 63 female) for further analyses, as
described in a previous study 43. Functional MRI scans were acquired on a 3T Siemens
TIM Trio system, using a T2* -weighted multi-echo pulse sequence with a TR of 2470 ms,
and multiple TEs of 9.4 ms, 21.2 ms, 33 ms, 45 ms, 57 ms, a flip angle of 78°, and 32
axial slices. The movie -watching session lasted for 8 minutes and 13 seconds (493
seconds), yielding 193 TRs, of which we discarded the first 4 volumes from all analyses.
The narrative dataset 38 consisted of preprocessed (fMRIPrep) 3 -T (Siemens Magnetom
Skyra) fMRI T2* weighted BOLD responses (TR 1500ms) from 52 participants (18 -29
years, µage = 28.5 ± 4.93, 31 female). Functional BOLD images were acquired in an
interleaved fashion using gradient -echo echo -planar imaging (EPI) with an in -plane
acceleration factor of 2 using GRAPPA: TR/TE = 1500/28 ms, flip angle = 64°, bandwidth =
1445 Hz/Px, in-plane resolution = 3 × 3 mm, slice thickness = 4 mm, matrix size = 64 × 64,
FoV = 192 × 192 mm, 27 axial slices with roughly full brain coverage and no gap, anterior –
posterior phase encoding, prescan normalization and fat suppression. The functional
scanning session included 400 TRs, totaling 600 seconds of acquisition time.
Belief Update Time-courses
The stimuli were presented to the participants using Testable (tes table.org). Before the
start of the experiment, participants were given instructions that included a definition of
the type of beliefs they were being asked to monitor (State/Agent/Action). An example of a
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
situation in which they would need to update those beliefs (from a scenario unrelated to
the stimuli) was also included. Participants were asked to focus on the stimuli
(movie/narrative) and press a key immediately when they felt their beliefs in the domain of
interest had been updated. Full i nstructions given to the participants for all three domains
can be found in Suppl Table 1.
For each participant, this yielded a binarized time -course indicating the points at which
they signaled that they had experienced a belief update. The precise timing of updates
varied between participants. Even when two participants experienced an update in
response to the same event in the story, they might respond at slightly different times due
to differences in their speed of responding, attentiveness and threshol d for deciding an
update has occurred. To accommodate this variability, we created a 5 second update
window around each belief update point, generating a boxcar timeseries for each
participant with a value of 1 for the temporal regions at which they experi enced updates
and 0 for all other times. We then averaged these time -series over participants. The
group-mean time -course then represents, for each point during the movie, the likelihood
that a person watching the movie would be experiencing an update. Group-averaged
time-courses for each domain were then smoothed using local regression smoothing
(loess in R, a non - parametric approach) with a 10% span which was kept the same for
both movie and story. These smoothed ratings were downsampled to match the fMRI
BOLD time-course, providing an update probability for each image acquired during movie -
watching (see Figure 1C).
We computed the correlation between all three update timecourses to check for any
strong (r>0.5) coupling between any two domains, which might render the neural analysis
less feasible. Additionally, an inter -rater consistency (IRC) analysis was performed to
assess the reliability of ratings. For each domain, the participant pool was randomly split
into two subgroups. Each subgroup’s time -courses were smoothed, averaged and their
group-mean correlated with the other subgroup's mean. This process was repeated 100
times for each domain in both movie and narrative.
The smoothed update probability time -courses were used to predict BOLD activation in
univariate analyses. Other analyses (HMM, ISC, ISFC, ISPC; see below) required
discrete estimates of periods when updates occurred. To generate these, for each
domain, we applied a threshold θ to the smoothed group -averaged timeseries. Time
periods whe re update probability exceeded θ were set to 1 and rest to 0. Where a
sequence of multiple TRs /scans exceeded θ, we selected the final TR /scan in the
sequence to represent the update. We adopted a θ of 2 SD above the mean update
probability for all movie update time-courses and θ of 1 SD above the mean value for the
Arousal ratings
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
(since no timepoints were 2 SD higher than the mean). Update timecourses for the
narrative used a θ of 1 SD as there was less variation in the update timecourses for th is
stimulus.
Arousal Ratings
The continuous ratings of Arousal were collected as part of a previous study 43. Participants
were instructed to watch the movie while continuously rating it with respect to their
emotional intensity (Arousal) using their mouse on a vertical slider ranging from -1 to 1.
fMRI preprocessing
The fMRI data for the movie were processed using SPM12 using a standard
preprocessing pipeline consisting of slice time correction, realignment, co -registration,
normalization and smoothing (6mm x 6mm x 9mm FWHM), as described in a previous
study43. To account for motion artifacts, six parameters capturing translation and rotation
(X-, Y -, Z -displacements, and pitch, roll, yaw) were removed from the functional data
through least -squares regress ion. Participants exceeding a maximum framewise
displacement of 1 mm or angular rotation > 1.5° were excluded from subsequent
analyses. The processed functional data then underwent voxel -wise detrending and was
subjected to a band -pass filter between 0.01 and 0.1 Hz, implemented using a second -
order Butterworth filter.
The narrative data we obtained were already preprocessed using fMRIPrep 38. These
images were smoothed with a 8mm x 8mm x 8mm FWHM kernel for the GLM.
For all the voxel pattern analyses, unsmoothed voxel-wise BOLD time series were used.
Region of Interest (ROI) definition
All ROI masks were defined from the Brainnetome Atlas40. We created vmPFC ROI by
combining 6 subregions in the Orbital Gyrus region. S imilarly, amPFC and dmPFC ROIs
were created by combining 6 and 4 (non -overlapping) subregions from the Superior
Frontal Gyrus. Precuneus (PCN) ROI was constructed by combining all 8 subregions in
the Precuneus region. The four primary ROI masks (PFC and PC N) pertaining to our
overarching hypothesis, are visualised in Supplementary Fig 1. Other
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
regions used in control analyses (Hippocampus, Visual Cortex, Posterior Cingulate Cortex,
Retrosplenial Cortex, Angular Gyrus and Middle Temporal Gyrus ) were similarly
constructed from various subregions as used in a previous study43, and was mainly used as
control to establish specificity of effects.
General Linear Model (GLM)
To estimate the neural responses corresponding to the State, Agent and Action updates,
we modelled the whole -brain movie viewing BOLD timeseries by fitting a general linear
model (GLM). It included a regressor modeling the temporal dy namics of the entire movie
as multiple events with 1 second duration, convolved with the canonical hemodynamic
response function (HRF) to model the expected BOLD response. Additionally, the GLM
incorporated the three group - averaged smoothed timeseries of the prediction updates
as parametric modulators (mean-centered). This allowed us to assess how fluctuations in
these prediction time - courses modulated brain activity throughout the movie. Six head -
motion parameters defined by the realignment were added to the model as nuisance
regressors.
We assessed 3 statistical contrast maps – States>Agents+Actions,
Agents>Actions+States and Actions>States+Agents with weights [1 -0.5 -0.5] for each
map. All contrast images were obtained at participant level and a group -level random -
effects analysis was conducted. Thereafter, we thresholded the statistical maps at q < 0.05
FDR with an extent threshold of 25 voxels (k = 25) which was performed using NeuroElf
(http://neuroelf.net).
The same GLM structure was employed for the Narrative data.
Intersubject Correlation Analysis (ISC) during
Updates
For each domain (State. Agent and Action), we first constructed a 7 scan(TR) window
around the update points previously identified i.e. 3 scan before and after update scans,
without any overlapping segments. Thereafter these segments were extracted and
concatenated and used to compute a leave -one-out ISC on each of the concatenated
timecourses in each PFC ROI. To do this, we computed the average BOLD timecourses
in each ROI and calculated the correlation of these timecourses for each participant with
mean of all other participants (minus the selected participant). This method ensured any
shared neural activity was a result of stimuli -driven processing than any idiosyncratic
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
noise. The State update timecourses consisted of 63 scans, Agents had 28 scans and
Action had 35 scans.
Bayesian Regression for ISC
ISC values of each PFC region during the updates were tested in a Bayesian hierarchical
regression model using participant’s ISC values as the dependent variable. This modelled
the effects of Domain (States, Agents, Actions), ROI (vmPFC, amPFC, dmPFC) and their
interaction on ISC. It included random effects of participants including random slopes for
the fixed effects to capture participant-level variance to these terms.
The model equation was therefore Y ij=β0 + β1(Domain)ij+ β2(ROI)ij+ β3(Domain×ROI)ij+ γ0j+
γ1j(Domain)ij+ γ2j(ROI)ij+ εij Where:
Yij is the ISC outcome for subject j in observation i. β0 is the overall intercept.
β1, β 2, and β 3 are the fixed effects coefficients for Domain, ROI, and their interaction,
respectively.
γ0j is the random intercept for subject j.
γ1j and γ 2j are the random slopes for the effects of Condition and ROI within subject j,
respectively.
εij is the residual error for subject j in observation i.
Posterior estimation was done using the “brms” package in R through Hamiltonian Monte
Carlo for 2 chains of 6000 samples with the first 500 discarded from each. Model
convergence was assessed through R-hat statistics, which were found to be
~1.00, sufficiently large estimated sample size for stable posterior estima tes, and by
visually inspecting the chains for convergence and large autocorrelations. Posterior
predictive checks for model validation were conducted by simulating 1,000 samples from
the posterior and by fitting with the empirical data (Suppl Fig 2, 3).
We were mainly interested in testing the domain-sensitiveness of each of these three ROIs
for their respective domain. That is if vmPFC has higher ISC than dmPFC and amPFC
during State updates, amPFC higher ISC than vmPFC and dmPFC during Agent updates
and dmPFC higher ISC than vmPFC and amPFC during Action updates. For this, we
computed Bayes Factors for (and against) these hypotheses and their associated
posterior probabilities.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Hidden Markov Modelling
Hidden Markov Models (HMMs) have been exte nsively used to compute neural state
dynamics from BOLD data, and have been particularly powerful in analysing naturalistic
stimuli that involve the maintenance of temporally extended internal states 12,13,43. Our
goal was to
estimate the timing of BOLD hidden latent transitions in each region, and compare that to
the belief update points, and contrast it across the neural regions and type of belief
updates. We used R package depmix6 for constructing the HMMs.
We aimed to implement a group -level HMM. After extracting the ROI BOLD time series for
each subject, we fit our bootstrapped HMM as follows. Although HMMs are usually fitted
by specifying a number of discrete neural states and then selecting based on some
penalizing information criteria, we face a pr oblem of intersubject variability here. That is,
different subjects would have variability in update timing for each domain, on each ROI.
This meant that the transition points of group -level HMM should be robust to this factor.
First, we determined the num ber of neural states present in each ROI. For each ROI, we
randomly removed 10 subjects from the dataset (~10% of data) and estimated HMMs over
a range of pre -specified latent states from 2 - 9 (for a total of 8 pre - specified states), from
which the best-fitting number of states was adjudicated using Bayesian Information Criteria
(BIC). This was repeated 30 times with 10 random subjects removed in each run, for a total
of 300 'subjects' removed or ~thrice the full dataset (n=111). This resulted in a vector of
the best fitting number of states for each HMM run (i.e. 30 such values, one for each
run). We took the median as the number of states for the final analysis.
Next, using this median number of states, we fit the group -level HMM and obtained the
posterior trajectories using the Viterbi algorithm. Since parameter estimation in HMMs
(Expectation Maximization algorithm) is inherently stochastic (unless one seeds it), it
outputs the transitions between the states with slight temporal differences. To e nsure
robustness against this, we ran this final HMM (using the median number of states) 10
times, and obtained an averaged transition time course, which indicates the probability of
state transitions at each point in time (0 -1). Higher values suggest the transition point is
consistent across the 10 runs, and hence robust for this ROI. This time course was then
binarized by subjecting it to a threshold of 2 standard deviation from its mean (exactly like
the belief update time courses), thus identifying scan s in which neural state transitions
occurred. This allowed us to not incorporate the individual variability in neural transitions
in a conservative and quantifiable manner, as well as accounting for the stochasticity in in
transition points which is a cons equence of Viterbi algorithm, (rather than just seeding it
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
with an arbitrary seed). Thus, our bootstrapped HMM ensured 1) most reliable number of
latent states are acquired, 2) with the most consistent transition times obtained for each
ROI, 3) while prese rving the update dynamics of each ROI individually, in the most
statistically efficient manner. Across run similarity and optimal states distributions can be
seen in Suppl Fig 4 & 5.
To investigate the degree to which belief updates were coincident with neural state shifts
identified by the HMM, we constructed forward windows of duration t scans beginning at
each neural shift in the final HMM state transition time series. We then counted what
proportion of belief updates of each type occurred within the s can windows following HMM
transitions (see Fig 3a). We repeated this process for windows of size 0 to 8 scans to
ensure that results were robust across different temporal windows.
To assess significance, we used non -parametric permutation testing. We repeated each
analysis 10,000 times, each time randomly shuffling the time -series of experiential shifts
(belief updates), while keeping the neural shifts constant. This yielded a distr ibution of
Results
under the null hypothesis that the timing of belief updates was unrelated to neural
shifts. We were then able to assess where our observed result fell within the null
distribution and assign a p -value accordingly. For example, a observed result more
extreme than 95% of null results would receive a p-value of 0.05.
We used this method to test the hypothesis that HMM neural transitions were more likely
to coincide with updates in a region’s preferred domain than in the other two domains. Th e
test statistic here was conditional on the criterion above (i.e., p_Rate1>p_Rate2 &
p_Rate1>p_Rate3, where Rate1 is the domain-specific Rating to each ROI while other
two are the 'nonspecific' ratings).
The exact same approach was later deployed for the HMM involving Arousal as well,
wherein the hypothesis then becomes p_Arousal > p_Rate1, p_Arousal > p_Rate2,
p_Arousal > p_Rate3 to underscore the specialization to the integrated form (i.e., Arousal)
than the fragmented form.
Intersubject Functional Connectivity (ISFC) Analysis
for functional integration
Intersubject functional connectivity (ISFC) is measure of the correlation of the BOLD time -
series in a region in one participant to the group -averaged BOLD time -series (without this
participant) to a second region. It is particularly useful in naturalistic stimuli du e to its
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
robustness to stimulus -unrelated processing (i.e. noise). We first used this method to
investigate functional connectivity profiles between the three PFC regions with Precuneus,
Hippocampus as well as within them during periods of State, Agent and Action updates.
We computed the ISFC employing a similar approach to that of the ISC, by concatenating
the 7-scan windows around the update timepoints (3.5 -scan before and after) for each of
State, Agent and Action. This allowed us to assess ISFC between pairs of regions in period
where each type of updates was occurring. For each participant, ISFC between a pair of
ROIs (i and j) was computed by taking their concatenated BOLD timecourse for the
selected updates for ROI i and correlating it with average ROI j time-series for the other
participants.
For Prefrontal Integration, we averaged the ISFC between the three PFC ROIs. This
involved averaging the ISFC between vmPFC -amPFC and vmPFC -dmPFC during State
updates, amPFC-vmPFC and amPFC -dmPFC during Agent updat es, and dmPFC -amPFC
and dmPFC-vmPFC during Action updates.
For Hippocampal and Precuneus Integration, this was computed with the hypothesized
domain-specific ROI – with vmPFC during States, amPFC during Agents and dmPFC
during Actions.
Bayesian Regression for ISFC
The Bayesian Regression for ISFC integration during updates was constructed and
executed in the exact manner as for the ISC (and with the same MCMC settings), with the
three Domains being replaced by PCN -PFC, PFC-HPC and Within -PFC Integration a s the
three 'Integration' terms to be tested.
We were mainly interested in hypothesis testing of which form of functional integration
was higher in each domain. That is if PFC -Precuneus has higher ISFC than PFC -
Hippocampus and Within -PFC during each of St ate, Agent and Action updates. We
computed Bayes Factors for (and against) this hypothesis and their associated posterior
probabilities.
Intersubject Pattern Correlation Analysis
This analysis used ISPC to compare the timing of across -subject alignment of voxel
patterns between Precuneus and PFC regions.
We first obtained the ISPC (intersubject spatial pattern correlations) from the unsmoothed
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
BOLD time -series. For each participant , this was achieved by extracting the multivoxel
pattern vector at each time point, and correlating that with the group -mean (sans this
participant), for a given ROI. This results in a time -course for this participant which reflects
the spatially correlate d pattern dynamics for that region. From this, for each participant
(and for each ROI) we selected three different subsets of this timeseries. In each domain,
we identified update points as described earlier and constructed a 9 -scan window around
them (4.5-scan before and after) resulting in as many segments as there were updates.
We extracted data from these segments and concatenated them to give ISPC timecourses
for the periods of State, Agent and Action updates. To compare how similar the ISPC was
across two regions, we then computed the correlation of these timecourses across
pairs of regions (e.g., computing Precuneus -vmPFC ISPC correlation for each update
type).
The main ISPC analysis was done comparing each of prefrontal nodes with Precuneus.
To establish the specificity of the results, PFC regions were also compared with a number
of other ROIs (VC, HPC, AG, MTL, RSC & PCC as shown in Suppl Fig 7 - 12).
We inferred multithreading if a region showed domain-selective increase of simila rity in
ISPCs with the PFC. This similarity was obtained by computing the relative increase in
correlation of a prefrontal region during its prefered updates (e.g. ROI - vmPFC ISPC
correlation is higher during State updates than ROI -amPFC/dmPFC). Prediction s were
tested by computing contrasts between conditions, of the same form as those used in the
original whole -brain GLM. For example, for States this was achieved by comparing
vmPFCStates - ((vmPFCAgents+vmPFCActions)/2) with amPFCStates -
((amPFCAgents+amPFCActions)/2) and dmPFCStates -
((dmPFCAgents+dmPFCActions)/2). These contrasts compute the relative increase in ISPC
correlation with the Precuneus for State updates and test whether this is higher for vmPFC
than the other two PFC regions. Similar logic was applied in Agents and Actions
Significance was assessed via non -parametric permutation tests. We shuffled the ISPC
time-courses of the prefrontal nodes, breaking any temporal associations within these,
while keeping the Precuneus (or control ROI) fixed.
The above -mentioned contrasts were computed in the permuted data (for 1000
permutations) to generate a distribution of expected values under the null hypothesis. As
before, a p- value for the contrast was calculated using the proportion of permuted values
that exceeded the true value.
Seed-based ISFC
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
We used this method to investigate ISFC between the Precuneus and other brain regions
during periods of State, Agent and Action updates. Precuneus BOLD time -series were
extracted from the same ROI mask we used in all other analyses and compared to the
group-average time -series of every other voxel in the brain. We used the AAL atlas to
obtain a whole-brain mask. For computational tractability, voxels were resampled at 6mm
x 6mm x 6mm, such that the seed time course was compared to 6814 voxels throughout
the brain. We computed the ISFC for periods of State, Agent and Action updates by
employing a similar approach to that of the ISC, i.e., concatenating the 7 -scan windows
(3.5-scan before and after) around the update timepoints of each type. For each participant,
ISFC between Precuneus and each voxel was computed by correlating the participant’s
Precuneus BOLD time -series with the group -averaged voxel time -series (i.e. Precuneus to
voxel). We then used the same approach to compute seed based ISFC for each of the PFC
regions. vmPFC was used as the seed in State updates, amPFC was used as the seed i n
Agent updates and dmPFC was used as the seed in Action updates
Individual participant’s correlation maps were averaged to give a group -level correlation
map. These whole brain ISFC maps were visualized at p 0.1).
Correlations between Subjective Experience and
Predictions
For estimating the correlations between prediction integrations and experience, we
obtained the correlations between Precuneus and each of the domain specific PFC
regions during the respective updates (from the ISFC analysis), and then averaged these
to get a single val ue for prediction integration strength between PFC and Precuneus
during the updates. This measure was then correlated with the whole movie ISC values
of Precuneus. The dynamic variant of the latter was shown to be highly correlated with
Arousal, making it a proxy of the shared, unified conscious experience.
Replication of key findings in spoken narrative
dataset
We sought to replicate the two key findings observed in the movie - modular predictions
and multithreaded integration. For this, we used the narr ative data. Belief update time -
courses were obtained from 3 independent groups of participants from Prolific, for States
(n=16), Agents (n=18) and Actions (n=20). The exact same instructions were used (aside
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
from changing the 'watching a short movie’ part in the instructions to 'listening to a short
story')
Similar to the movie, 5 second update window around each update point were used
generating a boxcar time-series for each participant, which were averaged and smoothed
in the same manner.
The three domain-specific belief updates were used as predictors of the narrative neural
data "It’s Not the Fall that Gets You" (9 min 7s). The exact same GLM structure used for
the movie was deployed for this with three resulting contrast maps
(States>Agents+Actions, Agents>Actions+States and Actions>States+Agents). Statistical
maps were thresholded at q < 0.05 FDR with an extent threshold of 25 voxels (k = 25)
which was performed using NeuroElf.
For the multithreading/ISPC analysis, we obtained ISPC from the unsmoothe d BOLD
data. We obtained the update -time points akin to the movie as well with one difference.
The narrative used a θ of 1 SD threshold as there was less variation in the update
timecourses for this stimulus. We constructed the same 9 -scan window around th ese
update points as in the movie. Relative correlations between PCN ROI with that of
domain-specific PFC regions were conducted and significance assessed via non -
parametric permutation tests where we shuffled the ISPC time -courses of the prefrontal
nodes, breaking any temporal associations within these, while keeping the Precuneus (or
control ROI) fixed.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
References
1. Daw, N. D., Gershman, S. J., Seymour, B., Dayan, P. & Dolan, R. J. Model -Based Influences on
Humans’ Choices and Striatal Prediction Errors. Neuron 69, 1204–1215 (2011).
2. Gläscher, J., Daw, N., Dayan, P. & O’Doherty, J. P. States versus Rewards: Dissociable Neural
Prediction Error Signals Underlying Model-Based and Model-Free Reinforcement Learning. Neuron 66,
585–595 (2010).
3. Lee, T. S. & Mumford, D. Hierarchical Bayesian in ference in the visual cortex. JOSA A 20, 1434–1448
(2003).
4. Fiser, J., Berkes, P., Orbán, G. & Lengyel, M. Statistically optimal perception and learning: from
behavior to neural representations. Trends Cogn. Sci. 14, 119–130 (2010).
5. Aitchison, L. & Le ngyel, M. With or without you: predictive coding and Bayesian inference in the brain.
Curr. Opin. Neurobiol. 46, 219–227 (2017).
6. Clark, A. Whatever next? Predictive brains, situated agents, and the future of cognitive science. Behav.
Brain Sci. 36, 181–204 (2013).
7. Bertolero, M. A., Yeo, B. T. T. & D’Esposito, M. The modular and integrative functional architecture of
the human brain. Proc. Natl. Acad. Sci. 112, E6798–E6807 (2015).
8. Meunier, D., Lambiotte, R. & Bullmore, E. T. Modular and Hierarchically Modular Organization of Brain
Networks. Front. Neurosci. 4, (2010).
9. Zador, A. M. A critique of pure learning and what artificial neural networks can learn from animal brains.
Nat. Commun. 10, 3770 (2019).
10. How to Grow a Mind: Statistics, Structure, and Abstraction | Science.
https://www.science.org/doi/10.1126/science.1192788.
11. Behrens, T. E. J. et al. What Is a Cognitive M ap? Organizing Knowledge for Flexible Behavior.
Neuron 100, 490–509 (2018).
12. Baldassano, C. et al. Discovering Event Structure in Continuous Narrative Perception and Memory.
Neuron 95, 709-721.e5 (2017).
13. Baldassano, C., Hasson, U. & Norman, K. A. Re presentation of Real-World Event Schemas during
Narrative Perception. J. Neurosci. 38, 9689–9699 (2018).
14. Zhang, R., Pitkow, X. & Angelaki, D. E. Inductive biases of neural network modularity in spatial
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
navigation. Sci. Adv. 10, eadk1256 (2024).
15. D’Ambrosio, D. B. et al. Achieving Human Level Competitive Robot Table Tennis. Preprint at
https://doi.org/10.48550/arXiv.2408.03906 (2024).
16. Yeshurun, Y., Nguyen, M. & Hasson, U. The default mode network: where the idiosyncratic self
meets the shared social world. Nat. Rev. Neurosci. 22, 181–192 (2021).
17. FitzGerald, T. H. B., Dolan, R. J. & Friston, K. J. Model averaging, optimal inference, and habit
formation. Front. Hum. Neurosci. 8, (2014).
18. Expectancy-related changes in firing of dopamine neurons depend on orbitofrontal cortex | Nature
Neuroscience. https://www.nature.com/articles/nn.2957.
19. Schuck, N. W., Cai, M. B., Wilson, R. C. & Niv, Y. Human Orbitofrontal Cortex Represents a
Cognitive Map of State Space. Neuron 91, 1402–1412 (2016).
20. Constantinescu, A. O., O’Reilly, J. X. & Behrens, T. E. J. Organizing conceptual knowledge in
humans with a gridlike code. Science 352, 1464–1468 (2016).
21. Mack, M. L., Preston, A. R. & Love, B. C. Ventromedial prefrontal cortex compression during
concept learning. Nat. Commun. 11, 46 (2020).
22. Schuck, N. W., Wilson, R. & Niv, Y. A state representation for reinforcement learning and decision -
making in the orbitofrontal cortex. in Goal-directed decision making: Computations and neural circuits
259–278 (Elsevier Academic Press, San Diego, CA, US, 2 018). doi:10.1016/B978 -0-12-812098-
9.00012-7.
23. Jenkins, A. C. & Mitchell, J. P. Mentalizing under Uncertainty: Dissociated Neural Responses to
Ambiguous and Unambiguous Mental State Inferences. Cereb. Cortex N. Y. NY 20, 404–410 (2010).
24. van Veluw, S. J. & Chance, S. A. Differentiating between self and others: an ALE meta -analysis of
fMRI studies of self-recognition and theory of mind. Brain Imaging Behav. 8, 24–38 (2014).
25. Park, S. A., Miller, D. S. & Boorman, E. D. Inferences on a multidimensiona l social hierarchy use a
grid-like code. Nat. Neurosci. 24, 1292–1301 (2021).
26. D’Argembeau, A. et al. The Neural Basis of Personal Goal Processing When Envisioning Future
Events. J. Cogn. Neurosci. 22, 1701–1713 (2010).
27. Muysers, H. et al. A persiste nt prefrontal reference frame across time and task rules. Nat.
Commun. 15, 2115 (2024).
28. Gusnard, D. A., Akbudak, E., Shulman, G. L. & Raichle, M. E. Medial prefrontal cortex and self -
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
referential mental activity: Relation to a default mode of brain func tion. Proc. Natl. Acad. Sci. 98, 4259–
4264 (2001).
29. Ostlund, S. B., Winterbauer, N. E. & Balleine, B. W. Evidence of Action Sequence Chunking in
Goal-Directed Instrumental Conditioning and Its Dependence on the Dorsomedial Prefrontal Cortex. J.
Neurosci. 29, 8280–8287 (2009).
30. Venkatraman, V., Rosati, A. G., Taren, A. A. & Huettel, S. A. Resolving Response, Decision, and
Strategic Control: Evidence for a Functional Topography in Dorsomedial Prefrontal Cortex. J. Neurosci.
29, 13158–13164 (2009).
31. Ribas-Fernandes, J. J. F. et al. A Neural Signature of Hierarchical Reinforcement Learning. Neuron
71, 370–379 (2011).
32. Margulies, D. S. et al. Situating the default-mode network along a principal gradient of macroscale
cortical organization. Proc. Natl. Acad. Sci. 113, 12574–12579 (2016).
33. Utevsky, A. V., Smith, D. V. & Huettel, S. A. Precuneus Is a Functional Core of the Default -Mode
Network. J. Neurosci. 34, 932–940 (2014).
34. Yamaguchi, A. & Jitsuishi, T. Structural connectivity of the precuneus and its relation to resting -
state networks. Neurosci. Res. (2023) doi:10.1016/j.neures.2023.12.004.
35. Cavanna, A. E. & Trimble, M. R. The precuneus: a review of its functional anatomy and
behavioural correlates. Brain 129, 564–583 (2006).
36. Kumral, E., Bayam, F. E. & Özdemir, H. N . Cognitive and Behavioral Disorders in Patients with
Precuneal Infarcts. Eur. Neurol. 84, 157–167 (2021).
37. Shafto, M. A. et al. The Cambridge Centre for Ageing and Neuroscience (Cam -CAN) study
protocol: a cross -sectional, lifespan, multidisciplinary ex amination of healthy cognitive ageing. BMC
Neurol. 14, 204 (2014).
38. Nastase, S. A. et al. The “Narratives” fMRI dataset for evaluating models of naturalistic language
comprehension. Sci. Data 8, 250 (2021).
39. Yazin, F., Das, M., Banerjee, A. & Roy, D. Contextual prediction errors reorganize naturalistic
episodic memories in time. Sci. Rep. 11, 12364 (2021).
40. Fan, L. et al. The Human Brainnetome Atlas: A New Brain Atlas Based on Connectional
Architecture. Cereb. Cortex 26, 3508–3526 (2016).
41. Nastase, S. A., Gazzola, V., Hasson, U. & Keysers, C. Measuring shared responses across
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
subjects using intersubject correlation. Soc. Cogn. Affect. Neurosci. 14, 667–685 (2019).
42. Chen, G. et al. An integrative Bayesian approach to matrix -based analysis in ne uroimaging. Hum.
Brain Mapp. 40, 4072–4090 (2019).
43. Majumdar, G., Yazin, F., Banerjee, A. & Roy, D. Emotion dynamics as hierarchical Bayesian
inference in time. Cereb. Cortex 33, 3750–3772 (2023).
44. Eichenbaum, H. Prefrontal–hippocampal interactions in episodic memory. Nat. Rev. Neurosci. 18,
547–558 (2017).
45. Brandman, T., Malach, R. & Simony, E. The surprising role of the default mode network in
naturalistic perception. Commun. Biol. 4, 1–9 (2021).
46. Simony, E. et al. Dynamic reconfiguration of t he default mode network during narrative
comprehension. Nat. Commun. 7, 12141 (2016).
47. Meshulam, M. et al. Neural alignment predicts learning outcomes in students taking an introduction
to computer science course. Nat. Commun. 12, 1922 (2021).
48. Silson, E. H., Steel, A., Kidder, A., Gilmore, A. W. & Baker, C. I. Distinct subdivisions of human
medial parietal cortex support recollection of people and places. eLife 8, e47391 (2019).
49. Chen, J. et al. Shared memories reveal shared structure in neural activity across individuals. Nat.
Neurosci. 20, 115–125 (2017).
50. Parr, T., Sajid, N. & Friston, K. J. Modules or Mean-Fields? Entropy Basel Switz. 22, 552 (2020).
51. Senden, M., Goebel, R. & Deco, G. Structural connectivity allows for multi -threading during rest:
the structure of the cortex leads to efficient alternation between resting state exploratory behavior and
default mode processing. NeuroImage 60, 2274–2284 (2012).
52. Takahashi, Y. K. et al. Dopaminergic prediction errors in the ventral tegmental area reflect a
multithreaded predictive model. Nat. Neurosci. 26, 830–839 (2023).
53. Griffa, A. et al. Evidence for increased parallel information transmission in hu man brain networks
compared to macaques and male mice. Nat. Commun. 14, 8216 (2023).
54. Dmochowski, J. P., Sajda, P., Dias, J. & Parra, L. C. Correlated Components of Ongoing EEG
Point to Emotionally Laden Attention – A Possible Marker of Engagement? Front. Hum. Neurosci. 6,
(2012).
55. Seth, A. K. & Bayne, T. Theories of consciousness. Nat. Rev. Neurosci. 23, 439–452 (2022).
56. Consortium, C. et al. An adversarial collaboration to critically evaluate theories of consciousness.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
2023.06.23.546249 Preprint at https://doi.org/10.1101/2023.06.23.546249 (2023).
57. Dennett, D. C. Consciousness Explained. xiii, 511 (Little, Brown and Co, New York, NY, US, 1991).
58. Hohwy, J. & Seth, A. Predictive processing as a systematic basis for identifying the neural
correlates of consciousness. Philos. Mind Sci. 1, (2020).
59. Patel, T., Morales, M., Pickering, M. J. & Hoffman, P. A common neural code for meaning in
discourse production and comprehension. NeuroImage 279, 120295 (2023).
60. Vanhaudenhuyse, A. et al. Default network connectivity reflects the level of consciousness in non -
communicative brain-damaged patients. Brain 133, 161–171 (2010).
61. Zacks, J. M. & Swallow, K. M. Event Segmentation. Curr. Dir. Psychol. Sci. 16, 80–84 (2007).
62. Corbetta, M. & Shulman, G . L. SPATIAL NEGLECT AND ATTENTION NETWORKS. Annu. Rev.
Neurosci. 34, 569–599 (2011).
63. de Haan, E. H. F. et al. Split-Brain: What We Know Now and Why This is Important for
Understanding Consciousness. Neuropsychol. Rev. 30, 224–233 (2020).
64. Pezzulo, G., Zorzi, M. & Corbetta, M. The secret life of predictive brains: what’s spontaneous
activity for? Trends Cogn. Sci. 25, 730–743 (2021).
Acknowledgements
We'd like to thank Rob McIntosh, Chris Lucas, Chris Summerfield, Karl Friston, Joszef Fiser, Mihalyi
Banyal and Adam Koblinger for helpful discussions. The authors would like to dedicate this to the memory
of Daniel Dennett. PH was supported by a BBSRC grant (BB/T004444/1). For the purpose of open access,
the author has applied a Creative Commons Attribution (CC BY) license to any Author Accepted
Manuscript version arising from this submission.
Ethics declarations
The authors declare no competing interests.
.CC-BY 4.0 International licenseavailable under a
(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
The copyright holder for this preprintthis version posted October 25, 2024. ; https://doi.org/10.1101/2024.10.24.620113doi: bioRxiv preprint
Text is read by the "Ask this paper" AI Q&A widget below.
Extraction quality varies by source — PMC NXML preserves structure
cleanly, OA-HTML may include some navigation residue, and OA-PDF can
have broken hyphenation. The publisher copy
(via DOI)
is the canonical version.