Multiplex real-time PCR in non-invasive respiratory samples to reduce antibiotic use in community-acquired pneumonia: a randomised trial

preprint OA: closed
Full text JSON View at publisher
Full text 16,232 characters · extracted from preprint-html · click to expand
Multiplex real-time PCR in non-invasive respiratory samples to reduce antibiotic use in community-acquired pneumonia: a randomised trial | Research Square window.SnipcartSettings = { analytics: { enabled: false } }; (function() { var accessVector = localStorage.getItem('access_vector') || ''; window.dataLayer = window.dataLayer || []; if (accessVector) { window.dataLayer.push({ user: { profile: { profileInfo: { snid: accessVector } } } }); } })(); (function(w,d,s,l,i){w[l]=w[l]||[];w[l].push({'gtm.start':new Date().getTime(),event:'gtm.js'});var f=d.getElementsByTagName(s)[0],j=d.createElement(s),dl=l!='dataLayer'?'&l='+l:'';j.async=true;j.src='https://www.googletagmanager.com/gtm.js?id='+i+dl;f.parentNode.insertBefore(j,f);})(window,document,'script','dataLayer','GTM-K279D39R'); Browse Preprints In Review Journals COVID-19 Preprints AJE Video Bytes Research Tools Research Promotion AJE Professional Editing AJE Rubriq About Preprint Platform In Review Editorial Policies Our Team Advisory Board Help Center Sign In Submit a Preprint Cite Share Download PDF Article Multiplex real-time PCR in non-invasive respiratory samples to reduce antibiotic use in community-acquired pneumonia: a randomised trial Jordi Carratalà, Gabriela Abelenda-Alonso, Laura Calatayud, Alexander Rombauts, and 12 more This is a preprint; it has not been peer reviewed by a journal. https://doi.org/ 10.21203/rs.3.rs-4186714/v1 This work is licensed under a CC BY 4.0 License Status: Published Journal Publication published 17 Aug, 2024 Read the published version in Nature Communications → Version 1 posted You are reading this latest preprint version Abstract The aetiology of community-acquired pneumonia (CAP) is often not identified and patients are overtreated with antibiotics. We assessed whether multiplex real-time PCR plus conventional microbiological testing is safe and more effective than conventional microbiological testing alone for reducing antibiotic use in community-acquired pneumonia (CAP). In this randomised trial, we recruited adult patients hospitalised with CAP at four Spanish hospitals. Patients were randomly assigned (1:1) to undergo either multiplex real-time PCR in non-invasive respiratory samples plus conventional microbiological testing or conventional microbiological testing alone. The primary endpoint was antibiotic use measured by days of antibiotic therapy (DOT). Between February 20, 2020, and April 24, 2023, 341 patients were assessed for inclusion, of whom 242 were finally enrolled. Of these, 119 were randomly assigned to multiplex real-time PCR plus conventional microbiological testing and 123 to conventional microbiological testing alone. The median DOT was 10.04 (IQR 7.98-12.94) in the multiplex PCR plus conventional microbiological testing group and 11.33 (IQR 8.15-16.16) in the conventional microbiological testing alone group (difference -1.04; 95% CI, -2.42-0.17; p=0.093). No differences between groups were observed in relevant secondary outcomes, including adverse events and 30-day all-cause mortality. Our findings do not support the routine implementation of multiplex real-time PCR in the initial microbiological testing in hospitalised patients with CAP. Further randomised controlled trials are needed to assess the safety and effectiveness of multiplex real-time PCR testing in improving antibiotic use and clinical outcomes in CAP. Clinicaltrials.gov registration: NCT04158492. Health sciences/Health care/Diagnosis/Laboratory techniques and procedures Health sciences/Medical research/Clinical trial design/Randomized controlled trials Full Text Additional Declarations There is NO Competing Interest. Cite Share Download PDF Status: Published Journal Publication published 17 Aug, 2024 Read the published version in Nature Communications → Version 1 posted You are reading this latest preprint version Research Square lets you share your work early, gain feedback from the community, and start making changes to your manuscript prior to peer review in a journal. As a division of Research Square Company, we’re committed to making research communication faster, fairer, and more useful. We do this by developing innovative software and high quality services for the global research community. Our growing team is made up of researchers and industry professionals working together to solve the most critical problems facing scientific publishing. Also discoverable on Platform About Our Team In Review Editorial Policies Advisory Board Help Center Resources Author Services Accessibility API Access RSS feed Manage Cookie Preferences © Research Square 2026 | ISSN 2693-5015 (online) Privacy Policy Terms of Service Do Not Sell My Personal Information {"props":{"pageProps":{"initialData":{"identity":"rs-4186714","acceptedTermsAndConditions":true,"allowDirectSubmit":false,"archivedVersions":[],"articleType":"Article","associatedPublications":[],"authors":[{"id":289319191,"identity":"32c15e4d-c033-41bd-8086-b4d723ef162d","order_by":0,"name":"Jordi Carratalà","email":"data:image/png;base64,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","orcid":"https://orcid.org/0000-0003-3209-2563","institution":"Bellvitge University Hospital","correspondingAuthor":true,"prefix":"","firstName":"Jordi","middleName":"","lastName":"Carratalà","suffix":""},{"id":289319192,"identity":"d373f2d7-9d5e-4f47-bc09-bed24387dd5b","order_by":1,"name":"Gabriela Abelenda-Alonso","email":"","orcid":"","institution":"Bellvitge University Hospital","correspondingAuthor":false,"prefix":"","firstName":"Gabriela","middleName":"","lastName":"Abelenda-Alonso","suffix":""},{"id":289319193,"identity":"db2fbcb7-a872-4fde-93d4-2abb94664a0d","order_by":2,"name":"Laura Calatayud","email":"","orcid":"","institution":"Bellvitge University Hospital","correspondingAuthor":false,"prefix":"","firstName":"Laura","middleName":"","lastName":"Calatayud","suffix":""},{"id":289319194,"identity":"007b0c0e-24b7-46fa-a905-89d300d6ff2d","order_by":3,"name":"Alexander Rombauts","email":"","orcid":"https://orcid.org/0000-0003-0227-5916","institution":"Bellvitge University Hospital","correspondingAuthor":false,"prefix":"","firstName":"Alexander","middleName":"","lastName":"Rombauts","suffix":""},{"id":289319195,"identity":"6c2b205d-936f-4b65-a3ae-00463eb6d415","order_by":4,"name":"Yolanda Meije","email":"","orcid":"","institution":"Hospital de Barcelona","correspondingAuthor":false,"prefix":"","firstName":"Yolanda","middleName":"","lastName":"Meije","suffix":""},{"id":289319196,"identity":"f639eef8-b1b5-4c3e-ab64-c63fe63d1c94","order_by":5,"name":"Isabel Oriol","email":"","orcid":"","institution":"Hospital Moises Broggi","correspondingAuthor":false,"prefix":"","firstName":"Isabel","middleName":"","lastName":"Oriol","suffix":""},{"id":289319197,"identity":"1b97f3e3-f751-4c32-8f1d-92023112c2f9","order_by":6,"name":"Nieves Sopena","email":"","orcid":"","institution":"Hospital Germans Trias i Pujol","correspondingAuthor":false,"prefix":"","firstName":"Nieves","middleName":"","lastName":"Sopena","suffix":""},{"id":289319198,"identity":"defbb828-fd68-4471-ab5e-93f01ce70f47","order_by":7,"name":"Ariadna Padullès","email":"","orcid":"","institution":"Bellvitge University Hospital","correspondingAuthor":false,"prefix":"","firstName":"Ariadna","middleName":"","lastName":"Padullès","suffix":""},{"id":289319199,"identity":"4673934e-59db-492d-8ad4-91282260bab5","order_by":8,"name":"Jordi Niubó","email":"","orcid":"","institution":"Bellvitge University Hospital","correspondingAuthor":false,"prefix":"","firstName":"Jordi","middleName":"","lastName":"Niubó","suffix":""},{"id":289319200,"identity":"755f3909-6da7-4538-984f-f90a30219ced","order_by":9,"name":"Alejandra Duarte","email":"","orcid":"","institution":"Hospital de Barcelona","correspondingAuthor":false,"prefix":"","firstName":"Alejandra","middleName":"","lastName":"Duarte","suffix":""},{"id":289319201,"identity":"a7389b62-e21d-43de-819d-90c0ad74d415","order_by":10,"name":"Jaume Llaberia","email":"","orcid":"","institution":"Hospital de Barcelona","correspondingAuthor":false,"prefix":"","firstName":"Jaume","middleName":"","lastName":"Llaberia","suffix":""},{"id":289319202,"identity":"f03fb4eb-7a0b-450c-9843-803310168351","order_by":11,"name":"Judit Aranda","email":"","orcid":"","institution":"Hospital Moises Broggi","correspondingAuthor":false,"prefix":"","firstName":"Judit","middleName":"","lastName":"Aranda","suffix":""},{"id":289319203,"identity":"31b1c23c-fad3-4879-ae08-cac0e19bc49e","order_by":12,"name":"Carlota Gudiol","email":"","orcid":"","institution":"Bellvitge University Hospital","correspondingAuthor":false,"prefix":"","firstName":"Carlota","middleName":"","lastName":"Gudiol","suffix":""},{"id":289319204,"identity":"1eb2e9ec-9634-42aa-a61b-847c38998a1c","order_by":13,"name":"Pau Satorra","email":"","orcid":"","institution":"IDIBELL","correspondingAuthor":false,"prefix":"","firstName":"Pau","middleName":"","lastName":"Satorra","suffix":""},{"id":289319205,"identity":"c40c8c52-39ba-441d-8ded-31c208ce5e04","order_by":14,"name":"Cristian Tebé","email":"","orcid":"","institution":"IDIBELL","correspondingAuthor":false,"prefix":"","firstName":"Cristian","middleName":"","lastName":"Tebé","suffix":""},{"id":289319206,"identity":"f0a5eeab-a803-43bc-a07b-c00af3d57add","order_by":15,"name":"Carmen Ardanuy","email":"","orcid":"https://orcid.org/0000-0003-0225-607X","institution":"","correspondingAuthor":false,"prefix":"","firstName":"Carmen","middleName":"","lastName":"Ardanuy","suffix":""}],"badges":[],"createdAt":"2024-03-29 08:40:19","currentVersionCode":1,"declarations":"","doi":"10.21203/rs.3.rs-4186714/v1","doiUrl":"https://doi.org/10.21203/rs.3.rs-4186714/v1","draftVersion":[],"editorialEvents":[{"content":"https://doi.org/10.1038/s41467-024-51547-8","type":"published","date":"2024-08-17T04:00:00+00:00"}],"editorialNote":"","failedWorkflow":false,"files":[{"id":62705477,"identity":"92e95983-02b1-4c9d-80bb-f0e2bcb01979","added_by":"auto","created_at":"2024-08-18 07:06:11","extension":"pdf","order_by":1,"title":"","display":"","copyAsset":false,"role":"manuscript-pdf","size":883632,"visible":true,"origin":"","legend":"","description":"","filename":"TheRADICAPTrial.pdf","url":"https://assets-eu.researchsquare.com/files/rs-4186714/v1_covered_8d8968b8-7ada-421c-9e18-f34cc226a639.pdf"}],"financialInterests":"There is \u003cb\u003eNO\u003c/b\u003e Competing Interest.","formattedTitle":"Multiplex real-time PCR in non-invasive respiratory samples to reduce antibiotic use in community-acquired pneumonia: a randomised trial","fulltext":[],"fulltextSource":"","fullText":"","funders":[],"hasAdminPriorityOnWorkflow":false,"hasManuscriptDocX":false,"hasOptedInToPreprint":true,"hasPassedJournalQc":"","hasAnyPriority":true,"hideJournal":false,"highlight":"","institution":"","isAcceptedByJournal":true,"isAuthorSuppliedPdf":true,"isDeskRejected":"","isHiddenFromSearch":false,"isInQc":false,"isInWorkflow":false,"isPdf":true,"isPdfUpToDate":true,"isWithdrawnOrRetracted":false,"journal":{"display":true,"email":"[email protected]","identity":"nature-portfolio","isNatureJournal":true,"hasQc":false,"allowDirectSubmit":false,"externalIdentity":"","sideBox":"","snPcode":"","submissionUrl":"","title":"Nature Portfolio","twitterHandle":"","acdcEnabled":false,"dfaEnabled":false,"editorialSystem":"ejp","reportingPortfolio":"","inReviewEnabled":true,"inReviewRevisionsEnabled":false},"keywords":"","lastPublishedDoi":"10.21203/rs.3.rs-4186714/v1","lastPublishedDoiUrl":"https://doi.org/10.21203/rs.3.rs-4186714/v1","license":{"name":"CC BY 4.0","url":"https://creativecommons.org/licenses/by/4.0/"},"manuscriptAbstract":"\u003cp\u003eThe aetiology of community-acquired pneumonia (CAP) is often not identified and patients are overtreated with antibiotics. We assessed whether multiplex real-time PCR plus conventional microbiological testing is safe and more effective than conventional microbiological testing alone for reducing antibiotic use in community-acquired pneumonia (CAP). In this randomised trial, we recruited adult patients hospitalised with CAP at four Spanish hospitals. Patients were randomly assigned (1:1) to undergo either multiplex real-time PCR in non-invasive respiratory samples plus conventional microbiological testing or conventional microbiological testing alone. The primary endpoint was antibiotic use measured by days of antibiotic therapy (DOT). Between February 20, 2020, and April 24, 2023, 341 patients were assessed for inclusion, of whom 242 were finally enrolled. Of these, 119 were randomly assigned to multiplex real-time PCR plus conventional microbiological testing and 123 to conventional microbiological testing alone. The median DOT was 10.04 (IQR 7.98-12.94) in the multiplex PCR plus conventional microbiological testing group and 11.33 (IQR 8.15-16.16) in the conventional microbiological testing alone group (difference -1.04; 95% CI, -2.42-0.17; p=0.093). No differences between groups were observed in relevant secondary outcomes, including adverse events and 30-day all-cause mortality. Our findings do not support the routine implementation of multiplex real-time PCR in the initial microbiological testing in hospitalised patients with CAP. Further randomised controlled trials are needed to assess the safety and effectiveness of multiplex real-time PCR testing in improving antibiotic use and clinical outcomes in CAP.\u0026nbsp;\u003c/p\u003e\n\u003cp\u003eClinicaltrials.gov registration: NCT04158492.\u003c/p\u003e","manuscriptTitle":"Multiplex real-time PCR in non-invasive respiratory samples to reduce antibiotic use in community-acquired pneumonia: a randomised trial","msid":"","msnumber":"","nonDraftVersions":[{"code":1,"date":"2024-04-10 01:50:33","doi":"10.21203/rs.3.rs-4186714/v1","editorialEvents":[],"status":"published","journal":{"display":true,"email":"[email protected]","identity":"nature-communications","isNatureJournal":true,"hasQc":false,"allowDirectSubmit":false,"externalIdentity":"NCOMMS","sideBox":"Learn more about [Nature Communications](http://www.nature.com/ncomms/)","snPcode":"","submissionUrl":"https://mts-ncomms.nature.com/","title":"Nature Communications","twitterHandle":"","acdcEnabled":true,"dfaEnabled":true,"editorialSystem":"ejp","reportingPortfolio":"Nature Communications","inReviewEnabled":true,"inReviewRevisionsEnabled":false}}],"origin":"","ownerIdentity":"335b5d7f-4600-4c14-b053-38416a5b5983","owner":[],"postedDate":"April 10th, 2024","published":true,"recentEditorialEvents":[],"rejectedJournal":[],"revision":"","amendment":"","status":"published-in-journal","subjectAreas":[{"id":30465536,"name":"Health sciences/Health care/Diagnosis/Laboratory techniques and procedures"},{"id":30465537,"name":"Health sciences/Medical research/Clinical trial design/Randomized controlled trials"}],"tags":[],"updatedAt":"2024-08-18T07:06:04+00:00","versionOfRecord":{"articleIdentity":"rs-4186714","link":"https://doi.org/10.1038/s41467-024-51547-8","journal":{"identity":"nature-communications","isVorOnly":false,"title":"Nature Communications"},"publishedOn":"2024-08-17 04:00:00","publishedOnDateReadable":"August 17th, 2024"},"versionCreatedAt":"2024-04-10 01:50:33","video":"","vorDoi":"10.1038/s41467-024-51547-8","vorDoiUrl":"https://doi.org/10.1038/s41467-024-51547-8","workflowStages":[]},"version":"v1","identity":"rs-4186714","journalConfig":"researchsquare"},"__N_SSP":true},"page":"/article/[identity]/[[...version]]","query":{"redirect":"/article/rs-4186714","identity":"rs-4186714","version":["v1"]},"buildId":"qtupq5eGEP_6zYnWcrvyt","isFallback":false,"isExperimentalCompile":false,"dynamicIds":[84888],"gssp":true,"scriptLoader":[]}

Text is read by the "Ask this paper" AI Q&A widget below. Extraction quality varies by source — PMC NXML preserves structure cleanly, OA-HTML may include some navigation residue, and OA-PDF can have broken hyphenation. The publisher copy (via DOI) is the canonical version.

My notes (saved in your browser only)

Ask this paper AI returns verbatim quotes from the full text · source: preprint-html

Answers must be backed by verbatim quotes from this paper's full text. Hallucinated quotes are dropped automatically; if no verbatim passage answers the question, we say so. How this works

Citation neighborhood (no data yet)

We don't have any in-corpus citations linked to this paper yet. This is a recent paper (2024) — citers typically take a year or two to land, and the OpenAlex reference graph may still be filling in.

Source provenance

europepmc
last seen: 2026-05-20T01:45:00.602351+00:00