A chronosequence of human remains on soil microbial populations

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Abstract

Surficial human decomposition produces substantial and measurable shifts in soil chemistry and microbial composition. This decade-long investigation examined temporal changes beneath surface deposited human remains and identified strong microbial and chemical responses in the first twelve to twenty four months, including decreased microbial diversity, elevated soil nutrients and sustained increases in several trace elements. Sequencing of the 16S rRNA V4 region showed increases in abundance of Gammaproteobacteria and Actinomycetes and decreases in Verrucomicrobiae and Planctomycetia during the first six to twelve months postmortem followed by a return towards control soil levels. Pseudomonadota (c. Alphabacteria) and Acidobacteria (c. Terriglobia) peaked in late decomposition stages after initial decreases during active decomposition. Initial soil pH and exchangeable base cations increased with a return of exchangeable aluminium after 5 years. Total and DTPA zinc increased after 3 years and remained elevated and did not return to baseline levels after nine years. Redundancy analysis demonstrated that microbial patterns in the first few years are tightly linked to elevated nutrients and trace elements, but these associations weaken as nutrient pools decline and responsive taxa diminish. Older cohorts retained a modest soil chemical signature and by approximately eight years both chemistry and microbial communities converged toward baseline. These findings show that soils preserve a long lived decomposition imprint and support the potential to extend postmortem interval estimation beyond active decomposition.
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This is a Preprint and has not been peer reviewed. This is version 1 of this Preprint. You must log in to post a comment. There are no comments or no comments have been made public for this article. This is a Preprint and has not been peer reviewed. This is version 1 of this Preprint. Add a Comment You must log in to post a comment. Comments There are no comments or no comments have been made public for this article. Surficial human decomposition produces substantial and measurable shifts in soil chemistry and microbial composition. This decade-long investigation examined temporal changes beneath surface deposited human remains and identified strong microbial and chemical responses in the first twelve to twenty four months, including decreased microbial diversity, elevated soil nutrients and sustained increases in several trace elements. Sequencing of the 16S rRNA V4 region showed increases in abundance of Gammaproteobacteria and Actinomycetes and decreases in Verrucomicrobiae and Planctomycetia during the first six to twelve months postmortem followed by a return towards control soil levels. Pseudomonadota (c. Alphabacteria) and Acidobacteria (c. Terriglobia) peaked in late decomposition stages after initial decreases during active decomposition. Initial soil pH and exchangeable base cations increased with a return of exchangeable aluminium after 5 years. Total and DTPA zinc increased after 3 years and remained elevated and did not return to baseline levels after nine years. Redundancy analysis demonstrated that microbial patterns in the first few years are tightly linked to elevated nutrients and trace elements, but these associations weaken as nutrient pools decline and responsive taxa diminish. Older cohorts retained a modest soil chemical signature and by approximately eight years both chemistry and microbial communities converged toward baseline. These findings show that soils preserve a long lived decomposition imprint and support the potential to extend postmortem interval estimation beyond active decomposition. https://doi.org/10.32942/X2GM1J Life Sciences, Physical Sciences and Mathematics Published: 2025-12-08 21:04 Last Updated: 2025-12-08 21:04 CC BY Attribution 4.0 International Language: English

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