Methods
Participants
We recruited 44 participants using participant pool management software
(http://www.sona-systems.com/), advertisement on the University campus, and word
of mouth. Participants were prescreened based on MRI safety criteria (e.g., no metal
implants) and self-reported good (or corrected to good) vision and hearing. The final
sample consisted predominantly of right-handed, native English speakers, between
18 and 45 years old with no neurological diseases. A few exceptions are noted: one
left-handed person with German/English first language and one with Farsi, one
ambidexter, five participants reported prior disorders (Obsessive Compulsive
Disorder, Autism Spectrum Disorder, Generalised Anxiety Disorder, Depression and
ADHD). Two participants failed to attend and two were excluded due to technical
problems during the acquisition (felt uncomfortable inside the scanner). The final
sample consisted of 40 participants: 21 females, 18–45 years, M = 29.02, SD = 6.20
years (though one participant did not complete the questionnaire).
The questionnaire and cognitive tasks collected remotely were approved by
The Ethics Committee of the School of Psychological Sciences at Birkbeck
(Reference number: 2324006). The whole study including the MRI was approved by
the ethics committee at the University College London (Reference number:
fMRI/2023/003). All participants provided written consent to participate in the study
and share their data. At the end of the study, participants received £67.50 in the form
of a voucher.
Procedure
Before their visit, participants filled out an MRI safety form to inquire about the
presence of metal implants, pacemakers, and other potential hazards for the MRI
examination. If they were MRI-safe, they filled out a questionnaire about
demographic information, language background, musical experience, and knowledge
of movies. Then the participant completed a set of cognitive tests on the Cognitron
platform (https://www.cognitron.co.uk/) and two scanning sessions were scheduled.
Two consent forms were signed online: one before the questionnaire and one before
the cognitive tests.
At the beginning of the first scan day, the participant completed an MRI safety
form again and signed a paper-based ethics consent form. The participant was
screened by an MRI operator once more before entering the scanner room. If the
participant was deemed completely safe to go inside the scanner, we initiated
Session 1.
Once in the scanning room, the participant chose suitable earbud sizes for
noise-attenuating headphones and donned a hairnet to prevent hair from getting into
the latches of the 30-channel coil. They then put the earbuds in and lay back on the
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scanner bed, putting the head into the coil. An additional pillow was put under the
participant's legs for comfort and to minimise movements along the bed. The head
was fixated in the coil with an in-house developed helmet with inflated pillows
('MR-MinMo', patent number GB 2205139.5 filed on 07 April 2022). Then the head of
the participant was localised and the first-surface mirror was placed on the coil. Once
the participant was inside the scanner the light was turned off inside the bore and in
the scanning room. Next, the short part of the movie was played to check if they
could see the picture and hear the sound clearly. The audio volume was adjusted for
each participant separately. After that, the quick localizer was run and the field of
view was adjusted to capture the whole brain. If it was not possible then the operator
prioritised removing as few slices of the cerebellum as possible. When ready, the
presentation script was started and eye-tracker calibration and validation procedures
were completed. The operator made adjustments to achieve the best validation
quality for the eye-tracker and then proceeded to the movie-watching task. During
Session 1, the participant watched the entirety of 'Back To The Future'
(backtothefuture), divided into three parts (Zemeckis, 1985). Eye-tracker calibration
was performed before each part. If they asked to get out of the scanner during the
break between movie parts, the operator assisted but only after encouraging them to
stay inside the scanner to avoid head displacement. The entire process for Session
1 took about three hours.
In Session 2, we followed the same procedures for preparing participants to
go inside the scanner and be scanned as in Session 1. The participant completed
several different tasks inside the scanner during Session 2: somatotopic mapping,
where the participant performed movements inside the scanner; retinotopic mapping,
where different checkerboard patterns were presented while the participant was
instructed to fixate on the dot in the middle of the screen and respond every time the
dot changed colour; and tonotopic mapping, during which a sequence of beeps was
played and the participant was instructed to press a button when they noticed a
difference in tone (see ‘Tasks’ for further details). All tasks together took
approximately 2.5 hours.
Tasks
Some participants failed to come back for the second day of testing and some
tasks were not included in the final dataset due to technical reasons. The number of
tasks completed by each participant is shown in Table 1 below.
sub id Questionnaires Cognitive tasks Movie-watching Somatotopy Retinotopy Tonotopy
sub-01 + + + + + +
sub-02 + + + + + +
sub-03 + + + + + +
sub-04 + - + - - -
sub-05 + + + + + -
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sub-06 + + + + + -
sub-07 + - + + + +
sub-08 - - + - - -
sub-09 + + + + + +
sub-10 + + + + + +
sub-11 + - + + + +
sub-12 + + + + + +
sub-13 + - + + + +
sub-14 + + + + + +
sub-16 + + + + + +
sub-17 + + + + + +
sub-18 + + + + + +
sub-19 + + + + + +
sub-20 + + + + + +
sub-21 + + + + + +
sub-22 + + + + + +
sub-23 + + + + + +
sub-24 + + + + + +
sub-25 + + + + + +
sub-26 + + + + + +
sub-27 + + + + + +
sub-29 + + + + + +
sub-30 + + + + + +
sub-31 + + + + + +
sub-32 + + + + + +
sub-33 + + + + + +
sub-35 + + + + + +
sub-36 + + + + + +
sub-37 + + + + + +
sub-38 + + + + + +
sub-39 + + + + + +
sub-40 + + + + + +
sub-42 + + + + + +
sub-43 + + + + + +
sub-44 + + + + + +
Total N 39 35 40 38 38 36
Table 1. The number of tasks completed by each participant. The ‘+’ means that the
participant fully completed the task, and the ‘-’ means that the data is missing or the
participant didn’t complete the task.
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Home
Questionnaires
The entire questionnaire took approximately 30 minutes to complete. The first
section consists of questions regarding basic demographics, language proficiency,
and background in music and movie preferences. The second section included 9
validated psychological questionnaires. The set of questionnaires was selected to
comprehensively assess participants’ mental health, well-being, inner experience,
self-talk, mindfulness, and awareness. These constructs are fundamental to
understanding cognitive and emotional processes, particularly in relation to individual
differences in subjective experience. The selected measures are widely validated,
reliable, and efficient, ensuring that they capture a broad spectrum of psychological
functioning. These were implemented on the Qualtrics platform
(https://qualtrics.ucl.ac.uk), and are described next.
The Patient Health Questionnaire (PHQ) is a 9-item tool for diagnosing
depression and various other mental health conditions frequently seen in primary
care settings (Kroenke et al., 2001) . Each item has a scale from 0 (not at all) to 3
(nearly every day). It is notably shorter than many other depression assessments,
yet it maintains similar levels of sensitivity and specificity.
The 7-item scale for General Anxiety Disorder (GAD-7) is a valid and efficient
instrument to screen and evaluate the severity of the condition in both clinical and
research settings (Spitzer et al., 2006) . Each item has a scale from 0 (not at all) to 3
(nearly every day). GAD is among the most frequently observed anxiety disorders in
both general medical practice and the broader population.
The Warwick Edinburgh Mental Well-Being Scale (WEMWBS) is a widely
used measure of mental well-being, comprising exclusively positively worded items
(Tennant et al., 2007). The participants need to evaluate their mental well-being over
the last two weeks. The scale has 14 questions with a 5-point Likert scale (none of
the time, rarely, some of the time, often, all of the time).
The Nevada Inner Experience Questionnaire (NIEQ) is used to assess the
subjective frequency at which people experience five common phenomenological
categories of inner thought (inner speaking, inner seeing, unsymbolized thinking,
feelings, and sensory awareness) via a visual analogue scale (Heavey et al., 2019).
The NIEQ has 10 items with two types of questions: 'How frequently…?' with a scale
from 0 (never) to 100 (always) and 'Generally speaking, what portion…?' with a scale
from 0 (none) to 100 (all).
The Self Talk Scale (STS) is used to assess the subjective frequency at which
people engage in various modes of self-talk (Brinthaupt et al., 2009) . The modes of
self-talk assessed by this scale, as delineated by a four-factor structure, relate to
‘self-regulatory’ elements, including social assessments, self-criticism,
self-reinforcement and self-management. Each question starts with 'I talk to myself
when…' and the participant needs to evaluate the frequency on a 5-point scale (1 -
never, 5 - very often).
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The Varieties of Inner Speech Questionnaire - Revised (VISQ-R) is used to
assess participants’ subjective frequency and phenomenological characteristics of
their experience of inner speech (Alderson-Day et al., 2018) . The characteristics
comprise a four-factor model, with factors comprising; dialogical inner speech,
condensed inner speech (as compared to spoken aloud), experience of other
people’s voices, and self-evaluative inner speech. It consists of 26 items and each
item is rated on a scale of 1 (never) to 7 (all the time).
The Five Facets of Mindfulness Questionnaire (FFMQ) is a 39-item instrument
that uses five polytomous response options to assess five different aspects of
mindfulness: observing, describing, acting with awareness, non-judging, and
non-reactivity to inner experience (Baer et al., 2008). Each item is rated on a scale of
1 (Never or very rarely true) to 5 (Very often or always true).
The Multidimensional Assessment of Interoceptive Awareness version II
(MAIA-II) evaluates eight factors of interoceptive body awareness (noticing,
not-distracting, not-worrying, attention regulation, emotional awareness,
self-regulation, body listening and trusting) (Mehling et al., 2018) . It consists of 37
items and each item is rated on a scale of 0 (never) to 5 (always).
The White Bear Suppression Inventory (WBSI) is a 15-item questionnaire
measuring thought suppression (Wegner & Zanakos, 1994) . Chronic thought
suppression is a variable that is related to obsessive thinking and negative affect
associated with depression and anxiety. Each item is rated on a 5-point scale from
strongly disagree (1) to strongly agree (5).
Cognitive tasks
The battery of cognitive tasks was designed to comprehensively assess a
range of cognitive abilities, including memory, executive function, attention,
reasoning, and creativity. The selection of tasks reflects key domains of cognition
relevant to general intelligence, cognitive flexibility, and problem-solving, providing a
robust framework for evaluating individual differences in cognitive function. We used
16 different tasks from the Cognitron platform. A detailed description of each task is
available in the original publication and supplementary material by the Cognitron
team (Del Giovane et al., 2023) . The participants completed all the tasks remotely.
The whole battery took around 45 minutes to complete. A description of each task is
provided next in the order presented to the participant. Figures illustrating the trial
structure of each task are available in the Supplementary Materials.
Object Memory Immediate and Delayed . This task measures memory
capacity on short and long-term scales. Participants viewed a list of 20
black-and-white objects (for example, stairs, table, ladle etc.), presented once at a
time, and were instructed to remember as many as they could. Immediately after
(Immediate version of the task), participants’ short-term memory was assessed by
presenting a grid containing one object from the previously presented list and 7
similar “distractor” objects. Participants had to identify and click the object they
recognised from the original list. In total 20 grids were presented (see
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Supplementary Fig. 1). This task was repeated at the end of the battery of cognitive
tasks to assess long-term memory (Delayed version of the task).
Word Memory Immediate and Delayed. This task is similar to the Object
Memory Immediate and Delayed but uses words instead of images (see
Supplementary Fig. 11).
2D manipulations . This task measures the ability to mentally rotate a grid
within a two-dimensional space. Participants were presented with a target grid
partially filled with coloured squares, as well as four comparison grids. One of these
grids was a rotated transformation of the target grid (see Supplementary Fig. 2).
Participants were instructed to identify the rotated grid as quickly and accurately as
possible.
Intra/extra-dimensional set-shifting task (ID/ED). The ID/ED task is a
computerized analogue of the Wisconsin Card Sorting Task (Grant & Berg, 1948) ,
designed to assess cognitive flexibility. Participants were presented with four
squares, followed by two objects appearing in two randomly selected squares. They
were instructed to identify the underlying rule, which changed after a number of
correct responses, by clicking on the object that matched the current rule (see
Supplementary Fig. 3). There were two main types of rule changes: (1) an ID rule
where the rule continues to rely on the same dimension (e.g., shape), but the
specific features change (e.g., from triangle vs. circle to square vs. star) and (2) an
ED rule where the rule changes to a different dimension altogether (e.g., from
selecting based on shape to selecting based on line pattern). These shifts require
increasing levels of cognitive flexibility, with ED shifts being particularly challenging
because they demand a shift of attention to an entirely new dimension. Performance
on ED trials is therefore considered a strong indicator of flexible thinking and
attentional control.
Spatial Span. This task assesses visuospatial working memory capacity.
Participants were presented with a 4-by-4 grid in which a sequence of squares lit up
and asked to repeat the presented sequence. The sequence began with two lit up
squares. Participants were required to repeat the presented sequence by clicking on
lightened-up squares. After each response, the sequence increased by one square
(see Supplementary Fig. 4).
Digit Span. The task measures working memory number storage capacity.
Participants were presented with a sequence of digits and asked to recall them by
typing on a digital keyboard (see Supplementary Fig. 5). With each correct response,
the sequence increased by one digit.
Switching Stroop. This task is a modified version of the classical Stroop test
(Stroop, 1935) and incorporates a switching condition in addition to the classic
interference condition. On each trial, participants were presented with the cue words
‘Text’ or ‘Ink’ accompanied by two coloured words, ‘RED’ and ‘BLUE’ and a central
coloured box - the 'Ink' (red or blue). Based on the given instruction ("Text" or "Ink"),
participants were required to click on one of the two words. If the rule was 'Ink',
participants selected the word printed in the same ink colour as the central box. If the
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rule was 'Text', they selected the word whose meaning matched the colour of the
central box (see Supplementary Fig. 6).
Verbal Reasoning. This task measures participants’ ability to interpret and
analyse written material. Participants processed syntactically complex sentences. In
each trial, a picture of a square and a circle was shown along with the sentence (for
example, 'the square is contained by a circle'). Participants needed to answer if the
sentence was true or false (see Supplementary Fig. 7).
Beads task. This task measures impulsivity. Participants were instructed to
work out which bead colour, out of two colours, is the most prevalent in the jar.
Participants could reveal one bead at a time by clicking the button 'Reveal a bead'.
At any point, they could choose to guess the dominant colour in the jar, based on the
beads revealed so far (see Supplementary Fig. 8).
Alternative Use Task. This task measures creativity. Participants were asked
to invent as many alternative uses for a common item as possible (for example,
newspaper). After each response, participants were asked if the idea came to their
mind as an 'Aha' moment. The task was limited to two minutes or 20 alternatives.
Divergent Association task. This task measures creativity and specifically
divergent thinking. Participants were asked to think of 10 words in four minutes that
were as different from each other as possible.
Verbal analogies. This task assesses verbal reasoning and the ability to
understand and apply logical relationships between word pairs. Participants were
presented with a statement where the relationship between two pairs of words must
be assessed as either ‘true’ or ‘false’. It followed the structure: ‘A is to B as C is to D’.
Participants must determine whether the relationship between A and B was indeed
analogous to the relationship between C and D (see Supplementary Fig. 9).
Word Definitions. This task measures the size of the vocabulary and level of
language comprehension. Participants needed to choose the correct definition of the
word out of four options (see Supplementary Fig. 10).
Spotter (digit vigilance) . This task assesses the participant's vigilance.
Participants briefly observed a sequence of numbers, obscured by 'noisy' pixels. The
task required the participant to spot and click anywhere on the screen as soon as
they recognised a zero (‘0’). Occasionally, the participant was asked how motivated
and tired they felt on a scale from one (not at all) to six (extremely).
Session 1
Participants watched the movie 'Back To The Future’ (Zemeckis, 1985). The
duration of the movie was one hour 51 minutes and 14 seconds. They were told to
remain still inside the scanner and enjoy the movie watching.
The movie file was cropped into three runs using the 'ffmpeg' package:
ffmpeg -ss 00:00:00 -i back_to_the_future.mp4 -c copy -t 00:33:48
back_to_the_future_cut1-34min.mp4
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ffmpeg -ss 00:33:36 -i back_to_the_future.mp4 -c copy -t 00:37:39
back_to_the_future_cut2-38min.mp4
ffmpeg -ss 01:11:03 -i back_to_the_future.mp4 -c copy -t 01:00:00
back_to_the_future_cut3-40min.mp4
The specific time for each cut was chosen to maintain a similar duration between
runs and to keep the smooth transition between scenes. The 2nd and the 3rd runs
included 12 seconds of the scene from the previous run to provide enough time for
the hemodynamic response function (HRF) and psychological functioning to
(theoretically) recover to a state similar to that in the preceding run. At the beginning
of each run, there were eight spare TRs received from the scanner to allow the HRF
to stabilise. Thus, eight, 16 and 16 TRs were removed during the analysis of runs
1-3, respectively such that the fMRI data matched the length of the full movie,
without overlaps. The length of the resulting runs was 34 minutes, 38 minutes 3
seconds and 40 minutes 12 seconds for runs one, two, and three respectively (1360,
1522 and 1608 TRs).
The cropped files maintain the original video size and quality, using all frames
with no cropping or other transformations:
● Video (codec): H.264 (High)
● Audio (codec, sampling rate, bitrate, channels): AAC (LC), 48.0 kHz, 339
kbps, 5.1
● Resolution (pixels): 720 x 576
● Aspect Ratio: 16:9
● Frame rate (fps): 25
The movie presentation was implemented using a script executed from
MATLAB (9.13.0.204977 R2022b) using PsychToolBox (v. 3.0.18) on a Windows PC
(Windows 11 Pro v22H2, 64-bit operating system) with a GStreamer of version 1.0.
Session 2
Somatotopic mapping
Each participant underwent a training session before going inside the
scanner. The participant watched short videos depicting each movement, listened to
the instructions from the researcher and practised to perform the movement. The
researcher assessed the movement and if all of them were well performed the
participant proceeded further. The participant did one more short training session
inside the scanner to find comfortable positions for limbs to perform proper
movements. The researcher assessed the quality of movements through the camera
inside the bore. After, the participant underwent two blocked-design runs.
Experimental conditions consisted of eight movements including left hand,
right hand, left foot, right foot, left part of the face, right part of the face, left tongue
and right tongue. The pattern for each movement is outlined in the Table 2 below.
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Experimental condition (movement) The pattern of the movement
Left/right hand Clench and relax the fist
Left/right foot Flex and extend the toes
Left/right part of the face Pull the corner of the mouth down and
to the side
Left/right tongue
Touch the last molar with the tip of the
tongue when the mouth and jaw are
closed
Rest No movement, remain still
Table 2. Somatotopic mapping task. The experimental conditions and pattern for
each movement.
In each condition, the participant maintained eye fixation on the screen where
the instructions were presented. The instructions consisted of one line of text with a
specific movement (for example, ‘right foot’). The participant kept doing the
movement until instructions were changed on the screen.
The metronome, with a 30bpm pace, played during each run in the
background. The participants were instructed to keep the pace of each movement
along with the metronome clicks.
The sequence of runs was counter-balanced across participants. Run one
and two lasted for seven minutes 47 seconds and seven minutes 49 seconds
respectively (excluding eight spare TRs in the beginning). The duration of each
movement varied between 15 and 22 seconds and was repeated three times per
run. The sequence of movements was pseudorandomised (exact sequences for
each run are shown in the Supplementary Materials ). The experiment was
implemented in PsychoPy (v. 2023.2.3) using standard builder functionality.
Retinotopic mapping
To map how the visual space is systematically represented across cortical
areas (i.e., retinotopic organisation), we used a population receptive field (pRF)
mapping task during fMRI scanning (Dumoulin & Wandell, 2008). The stimulus
consisted of a black-and-white contrast-reversing checkerboard (2Hz), embedded
within a rotating wedge (20º angle) and expanding/contracting ring. Each run
included six ring cycles (48 seconds each, logarithmic eccentricity scaling) and eight
wedge cycles (36 seconds each, alternating clockwise/anticlockwise). Stimuli
covered a maximum eccentricity of 8.6 from fixation and updated position every one
second/TR.
Baseline periods (20 seconds) were inserted at the start, midpoint, and end,
during which participants fixated on a central dot against a mid-gray background. A
small white fixation dot (0.2° visual angle radius) and a black radial grid were always
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visible to support stable fixation. Each run lasted 348 seconds (five minutes 56
seconds), and participants completed three identical runs.
To maintain engagement, participants performed a simple detection task,
pressing a button whenever the fixation dot changed from white to black. Due to
technical issues, behavioural responses from the first nine participants were not
recorded. Finally, eye movements were tracked using an Eyelink 1000 Plus (SR
Research, Ottawa, ON), with a 5-point custom calibration performed before each
run. The task was implemented in MATLAB using PsychToolBox (v. 3.0.18) on a
Windows PC (Windows 11 Pro v22H2, 64-bit operating system) with a GStreamer of
version 1.0.
Tonotopic mapping
The full description of the task can be found in the original study on tonotopic
mapping of the auditory cortex (F. K. Dick et al., 2017) . Participants listened to
four-tone motifs and performed a one-back task on infrequent repeats. The full
frequency range of the tones (175-5286 Hz) was divided into ten spectrally delimited
bands, with each band having a 6-semitone range. At any given point in time, tones
were selected from only one frequency band; after 10 motifs, the frequency range
stepped up (in one run) or down (in the other) to the next band. Each run swept
through the full frequency range four times (64 seconds per sweep). In this way,
each frequency band occurred with consistent timing within a sweep; critically, then,
voxels that respond preferentially to that frequency range should also respond at a
consistent phase lag (F. Dick et al., 2012; F. K. Dick et al., 2017; Sereno et al., 1995).
The participants were instructed to press the button every time they heard the
same tone twice in a row (1-back task). The experiment was implemented in
PsychoPy (v. 2023.2.3) using standard builder functionality.
Data acquisition
Functional and anatomical images were acquired on a 3.0T Siemens
MAGNETOM Prisma with a 30-channel radio-frequency (RF) head coil (Siemens
Healthcare, Erlangen, Germany) for both sessions and all tasks.
MRI parameters: backtothefuture task
We used multiband echo-planar imaging (TR = 1500 ms, TE = 35.2 ms, 72
interleaved slices, slice thickness 2.0 mm, voxel size 2 mm isotropic,
anterior-posterior phase encoding direction (A >> P), field of view 212 mm, flip angle
60 deg, echo spacing 0.56ms, bandwidth 2620 Hz/Px), with a 4x multiband
acceleration factor. The first, second, and third run had 1360, 1522, and 1608 TRs
respectively (including eight spare TRs at the beginning of each run). The phase
reverse encoding (P >> A) scan was acquired right after each run.
A 5-min high-resolution T1-weighted MPRAGE anatomical MRI scan followed
the functional scans (TR = 2300 ms, TE = 2.98 ms, 208 sagittal slices, slice thickness
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1.0 mm, voxel size 1 mm isotropic, anterior-posterior phase encoding direction (A >>
P), field of view 212 mm, flip angle 9 deg, echo spacing 7.1 ms, bandwidth 240
Hz/Px).
MRI parameters: somatotopic mapping
At the beginning of Session 2, a structural scan was acquired to help position
the field of view more accurately for upcoming tasks. A 2-min high-resolution
T1-weighted MPRAGE anatomical MRI scan was acquired (TR = 1530 ms, TE = 2.98
ms, 176 sagittal slices, slice thickness 1.0 mm, voxel size 1.0 mm isotropic,
anterior-posterior phase encoding direction (A >> P), field of view 256 mm, flip angle
9 deg, echo spacing 7.1 ms, bandwidth 240 Hz/Px).
We used multiband echo-planar imaging (TR = 1000 ms, TE = 30.0 ms, 44
interleaved slices, slice thickness 2.0 mm, voxel size 2 mm isotropic,
anterior-posterior phase encoding direction (A >> P), field of view 212 mm, flip angle
62 deg, echo spacing 0.7 ms, bandwidth 1814 Hz/Px) with a 4x multiband
acceleration factor. The first and the second run had 467 and 469 TRs respectively
(including eight spare TRs at the beginning of each run). The phase reverse
encoding (P >> A) scan was acquired at the end of the task.
MRI parameters: retinotopic mapping
We used multiband echo-planar imaging (TR = 1000 ms, TE = 35.2 ms, 48
interleaved slices, slice thickness 2.0 mm, voxel size 2 mm isotropic,
anterior-posterior phase encoding direction (A >> P), field of view 212 mm, flip angle
60 deg, echo spacing 0.56 ms, bandwidth 2620 Hz/Px) with a 4x multiband
acceleration factor. All three runs had the same number of 356 TRs (including eight
spare TRs at the beginning of each run). The phase reverse encoding (P >> A) scan
was acquired at the end of the task.
MRI parameters: tonotopic mapping
We used multiband echo-planar imaging with the same parameters as for the
somatotopic mapping task (see above). Both runs had the same number of 264 TRs
(including eight spare TRs at the beginning of each run). The phase reverse
encoding (P >> A) scan was acquired at the end of the task.
Eye-tracker apparatus
Eye tracker data was acquired using an MRI-compatible EyeLink 1000 Plus
long-range mount (SR Research Ltd., Mississauga, Ontario, Canada). The optic
camera head (f=50mm/F1.4 lense) and illuminator (FL-890) were positioned
horizontally behind the screen inside the bore on a tray. A front silvered mirror was
placed on the anterior MRI coil. The binocular setup was used with a sampling
frequency of 1000 Hz and a 9-dot calibration procedure covering the whole screen
(5-dot calibration for retinotopy task). For accuracy validation, participants had to
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fixate on the same dots as during calibration (EyeLink software v. 5.15). The
calibration and validation procedures were repeated until the best possible accuracy
was achieved.
The setup inside the bore was the same between days. Stimuli were
presented in full-screen mode through a mirror-reversing LCD projector (EPSON
LB-1100U) to a rear-projection screen, with participants viewing through the front
silvered mirror attached to the head coil. Participants were positioned 57.5 cm from
the screen, which was viewed via a mirror attached to the head coil, and measured
35.5 cm in width and 26 cm in height. Stimuli were presented in their native
resolution and subtended 28.9° × 18.3° (29.6x18.5cm) of visual angle. The
eye-tracker camera and illuminator were located inside the bore behind the screen
on a movable platform. The position of the screen, projector, eye-tracker platform,
and first-surface mirror was controlled between participants and checked to be the
same.
The eye tracker data was acquired during backtothefuture and retinotopy
tasks. The MATLAB script started with the calibration and validation of the
eye-tracker, and if the calibration was deemed sufficient, the main experiment began
after 8 spare TRs were received from the scanner. The script sent messages (‘MSG’
in ASCII eye link data file) indicating the beginning of the event. In the
backtothefuture task, at the beginning of the movie part, each pulse and frame was
sent to the ASCII data file (see Data Records for more details). In both tasks, the
presentation script was implemented in MATLAB (9.13.0.204977 R2022b) using
PsychToolBox (v. 3.0.18) on a Windows PC (Windows 11 Pro v22H2, 64-bit
operating system) with a GStreamer of version 1.0.
Physiological recordings
The pulse oximetry data were acquired using a Siemens wireless peripheral
pulse unit (PPU; Siemens Healthcare GmbH, Erlangen, Germany). The PPU sensor
was attached to the index finger of the left index hand. Participants were instructed
to avoid any left hand movements (including fingers) to prevent movement artefacts.
The pulse data was acquired during backtothefuture, retinotopy and tonotopy tasks.
Preprocessing
The raw DICOM data was transformed to a Brain Imaging Data Structure
(BIDS) valid format using the heudiconv tool (https://github.com/nipy/heudiconv ; v.
1.3.0) (Gorgolewski et al., 2016) . All anatomical images were defaced using the
pydeface tool (https://github.com/poldracklab/pydeface ; v. 2.0.2). MRI data were
preprocessed using the AFNI software suite (AFNI_23.0.03 'Commodus') to ensure
data quality and prepare it for statistical analysis (Cox, 1996; Cox & Hyde, 1997).
The backtothefuture and somatotopy tasks were analysed using the same
preprocessing pipeline and the tonotopy and retinotopy tasks were preprocessed
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differently according to the pipeline described in the previous relevant papers
(Chow-Wing-Bom et al., 2025; Dekker et al., 2019; F. K. Dick et al., 2017).
Anatomical
The anatomical T1-weighted image was skull-stripped and then nonlinearly
aligned to the MNI152 2009 template, which generated a standard-space anatomical
image, a nonlinear warp and an affine transformation matrix (using AFNI SSwarper
command). The anatomical surfaces were reconstructed using Freesurfer software
(recon-all with default parameters, version 7.3.2-20220804-6354275,
http://www.freesurfer.net) (Destrieux et al., 2010; Fischl, 2012) . The resulting
surfaces were converted to AFNI friendly format (using Surface Mapper (SUMA)
tool) and later used to create white matter and ventricle regions of interest to use
them as nuisance regressors during preprocessing. These regions were eroded and
used as noise regressors in the preprocessing of backtothefuture and somatotopy
tasks.
Functional
Functional data underwent multiple preprocessing steps to ensure alignment
and reduce artifacts. First, the initial volumes of each functional run were removed to
eliminate pre-steady-state effects. The first eight TRs were removed from run 1, and
the first sixteen TRs were removed from runs 2 and 3 (backtothefuture task). In other
tasks, the first eight TRs were removed from each run. To correct for geometric
distortions caused by susceptibility-induced field inhomogeneities, a
blip-up/blip-down correction was applied using a reverse-phase encoding field map.
The median images of the forward and reverse phase-encoding runs were extracted,
and their midpoint warps were computed and applied to the functional runs using
‘3dNwarpApply’.
Motion correction was performed using a two-pass alignment strategy
(‘3dvolreg’). First, volumes within each run were aligned to the run-specific
reference; then, these within-run bases were themselves aligned to a common
Reference
volume. This hierarchical strategy allowed all runs to be brought into a
shared alignment space. To further improve robustness, alignment was performed
using a two-pass procedure: an initial low-resolution stage estimated gross head
motion, which was then refined at full resolution. All further steps described below
were applied only to backtothefuture and somatotopy tasks. The specifics of
processing for the retinotopy task are described in the section below (Retinotopic
mapping).
Each volume was aligned to a reference volume determined by the minimum
outlier fraction across all runs. The aligned functional images were then aligned to
the anatomical image (‘align_epi_anat.py ’). Finally, the functional data were
nonlinearly aligned to MNI standard space.
A whole-brain mask was generated by computing the union of individual
run-based masks. The functional images were then smoothed using a 4 mm
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full-width half-maximum (FWHM) Gaussian kernel to improve signal-to-noise ratio
(‘3dBlurToFWHM’). Next, the data were temporally band-pass filtered (0.01-1 Hz) to
reduce low-frequency drifts and high-frequency noise.
Because the runs of the backtothefuture task were very long the baseline
polynomial degree was fixed to two. For all other tasks, the degree was computed
automatically using AFNI algorithms based on the length of the run.
Retinotopic mapping
To enable surface-based analysis, each participant’s functional data were first
aligned to their high-resolution anatomical image using the following approach. As
described previously, the functional volumes used for retinotopic mapping were
motion-corrected using a two-pass alignment strategy (3dvolreg), which included
within-run and across-run registration to a common reference volume. Importantly,
this motion correction was performed prior to any additional preprocessing (e.g.,
spatial blurring or nuisance regression), so the volumes used here reflect unblurred,
motion-corrected data.
Each participant’s motion-corrected volume was registered to their
high-resolution anatomical image using boundary-based registration (bbregister,
FreeSurfer). Registration quality was visually inspected and quantified with the cost
function value. All participants with a minimum cost function value above 0.451 were
re-registered to a single-band reference volume from run one. This applied to
participants 01, 07, 20, 21, 25 and 44.
Following successful registration, volumetric data for each run were then
resampled onto the surface of both hemispheres using cortical surface models
reconstructed from each participant’s high-resolution anatomical scan (mri_vol2surf
command from Freesurfer). Sampling was performed at 50% cortical depth, using a
3 mm FWHM surface-based smoothing kernel to enhance signal-to-noise ratio while
preserving spatial specificity. This step generated a surface-based time series for
each hemisphere and run, enabling subsequent retinotopic analysis to be conducted
in native cortical surface space.
The resulting outputs were then converted into a MATLAB-compatible format
for further analysis using the samsrf_mgh2srf command from the SamSrf toolbox
(version 7.13; https://github.com/samsrf). pRF estimates were computed by fitting a
2D Gaussian model to the data. As a result, three pRF parameters for each vertex
on the cortical surface were computed: the x- and y-coordinates of the pRF center
and the pRF size (σ). Eccentricity and polar angle maps were computed from the x-
and y-coordinates.
To model population receptive fields, the symmetric bivariate Gaussian model
was used, with mean (x, y) representing the preferred retinotopic location, and
standard deviation (σ) representing pRF size. To identify the pRF model parameters
(x, y, σ) that best predict the measured time series, a two-stage fitting procedure was
employed. In a coarse fitting step, data were smoothed along the cortical surface
1 https://www.mail-archive.com/
[email protected]/msg38136.html
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(Gaussian FWHM kernel of 5 mm) and a grid-search approach was used to identify
model parameters that maximize the Pearson correlation between observed data
and the pRF model’s predicted time course. Vertices with R 2 > 0.05 were entered as
starting value in a fine-fitting step, which used MATLAB’s fminsearch function to
identify parameters that minimised the squared residual deviations between the
model and unsmoothed data. Finally, X and Y position estimates were converted to
eccentricity (distance from fixation) and polar angle. After that, each map was
visually inspected for quality control before group-averaging (see Technical
Validation).
After estimating pRF parameters on each participant’s native cortical surface,
the resulting maps were projected to a common reference space to enable
group-level analysis. This was achieved by resampling each individual’s maps from
their native cortical surface onto the fsaverage template surface provided by
FreeSurfer (Native2TemplateMap function in SamSrf v7.13). The resampled maps
were then averaged vertex-wise across participants on the fsaverage mesh, resulting
in group-level retinotopic maps for each parameter: eccentricity, polar angle, and
pRF size.
Data Records
Information and anatomical data that could be used to identify participants
have been removed from all records. The resulting dataset is available on the
OpenNeuro.org platform (https://openneuro.org/datasets/ds006642 ). The scripts
used for data processing are available on the GitHub repository
(https://github.com/levchenkoegor/movieproject2).
Questionnaires
Location sourcedata/Questionnaire_participants_values.csv
File format comma-separated value (CSV)
Participants’ responses to a battery of questionnaires (see Questionnaires
under Tasks section) in a comma-separated value (CSV) file. Data is structured as
one line per participant with all questions and test items as columns.
Cognitive tasks
Location sourcedata/Cognitron_assessment_participants_cleaned.tsv
File format Tab-separated values (TSV)
Participants’ responses to a battery of cognitive tasks (see Cognitive Tasks
under Tasks section) in a TSV file. The file contains the sub-id identifier column and
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data with all responses organised in a JSON format. The table is structured as one
line per task (16 rows per participant).
Anatomical MRI
Location sub-/ses-/anat/sub-_ses-_T1w.nii.gz
Session 001, 002
File format NIfTI, gzip-compressed
Sequence protocol
sub-/ses-00/anat/sub-_ses-_T1w.json
The anatomical scan was acquired at the end of the first session (5-min
MPRAGE) and at the beginning of Session 2 (2-min MPRAGE). Both raw anatomical
images were defaced. They are available as a 3D image file, stored as
sub-_ses-_T1w.nii.gz. The sequence protocol file accompanies
anatomical images in the same folder, stored in JavaScript Object Notation (JSON)
file format.
Functional MRI
Location
sub-/ses-/func/sub-_ses-_task-_run-_bold.nii.gz
Session 001, 002
Task-name backtothefuture, somatotopy, retinotopy, tonotopy
Run 001, 002, 003
File format NIfTI, gzip-compressed
Sequence protocol
sub-/ses-/func/sub-_ses-_task-_run-_bold.json
Raw fMRI data is available as individual time series files per each task run.
Location
sub-/ses-/fmap/sub-_ses-_acq-_dir-P
A_run-_epi.nii.gz
Session 001, 002
Task-name func, somatotopy, retinotopy, tonotopy
Run 001, 002, 003
File format NIfTI, gzip-compressed
Sequence protocol
sub-/ses-/fmap/sub-_ses-_acq-_dir-P
A_run-_epi.nii.json
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The phase reverse encoding (P >> A) scan was acquired for each task and is
available as an individual time series. The func task-name refers to the
movie-watching task (backtothefuture in all other files). The sequence protocol file
accompanies functional images in the same folder, stored in a JSON file.
Physiological recordings
Location
sourcedata/sub-/ses-/func/sub-_ses-_run-
_task-_physioPULS.tsv
Session 001, 002
Task-name backtothefuture, retinotopy, tonotopy
Run 001, 002, 003
File format TSV
Information file
sub-_ses-_run-_task-_physioInfo.tsv
Raw pulse data (acquired with a pulse oximetry sensor) is available as
individual time series files in TSV format.
Eye tracker recordings
Location
sourcedata/sub-/ses-/func/sub-_ses-_run-_task-_eyelinkraw..gz
Session 001, 002
Task-name backtothefuture, retinotopy
Run 001, 002, 003
File format EDF or ASC, gzip-compressed
Raw eye-tracker data is available in two formats: EDF and ASC. Raw
eye-tracker EDF files were converted to ASCII files using the edf2asc tool
(EDF2ASC version 4.2.1197.0) from the Eyelink Developers Kit. The ASCII files
contain messages (‘MSG’) flags to align the EPI and gaze positions data.
‘MOVIE_START’ indicates the beginning of the movie, ‘FRAMENUMBER_*”
indicates the number of frame showed on the screen and “PULSE_*” indicates the
number of pulse received from the scanner. The snippet of the ASCII file with
messages is provided below:
…
3976285 980.1 600.7 372.0 1052.0 582.5 508.0 32768.0 .....
3976286 980.0 601.7 372.0 1053.3 582.5 509.0 32768.0 .....
MSG 3976287 MOVIE_START
3976287 980.0 601.7 370.0 1053.6 577.6 510.0 32768.0 .....
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3976288 984.1 600.8 370.0 1053.6 577.6 513.0 32768.0 .....
…
3976301 981.8 599.4 373.0 1056.6 578.3 514.0 32768.0 .....
3976302 981.8 599.4 364.0 1058.3 581.9 516.0 32768.0 .....
MSG 3976303 FRAMENUMBER_1
MSG 3976303 PULSE_9
3976303 985.1 596.7 364.0 1060.9 584.1 517.0 32768.0 .....
3976304 983.7 595.9 368.0 1061.3 584.1 516.0 32768.0 .....
…
In the current snippet, there are events in the ‘MSG’ lines. In a similar way, the
retinotopic mapping eye tracker ASCII files have ‘MSG’ for each volume.
‘VOLUME_*” indicates the number of pulse received from the scanner.
…
3623949 867.7 757.3 637.0 882.7 826.4 574.0 32768.0
3623950 863.9 756.0 637.0 882.5 826.4 573.0 32768.0
MSG 3623951 VOLUME 1
3623951 862.3 755.3 636.0 881.8 823.3 572.0 32768.0
3623952 862.3 755.3 636.0 881.8 823.3 572.0 32768.0
…
In both cases, the messages (‘MSG’) received from the MATLAB script make it
possible to align the eye-tracker and EPI data precisely.
Freesurfer outputs
Location derivatives/freesurfer/sub-
The standard Freesurfer outputs after running the recon-all command for each
participant separately. The fsaverage folder is stored along with participants’ files
too. In each folder there is a SUMA folder with all the outputs from the
SUMA_Make_Spec_FS command. The pRF maps are stored under the retinotopy
folder.
SSwarper outputs
Location derivatives/sub-/SSwarper
The standard SSwarper outputs after running the SSwarper AFNI command
for each participant separately. This procedure both skull-strips the anatomical
volume and computes the nonlinear warp to standard space.
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Preprocessed functional MRI
Location
derivatives/sub-//sub-_task-_run-_preproc.nii.gz
Task-name backtothefuture, somatotopy, tonotopy, retinotopy
Run 001, 002, 003
The preprocessed fMRI data after running the AFNI processing script
(afni_proc.py). The data is available as individual time series files per each task run.
The preprocessing script for each task can be found on GitHub repository.
Technical Validation
Evaluation of head motion control
The head motion was evaluated using the framewise displacement (FD)
metric, which measures instantaneous head motion by comparing the motion
between the current and previous volumes. The FD values were calculated using
standard AFNI functionality (3dvolreg function). Figure 4 shows the overall
distribution of FD values for each task and run or condition. The distributions (first
column) are highly skewed toward lower FD values, with the majority concentrated
below 0.2 mm. A dashed red line marks the 95th percentile of the FD values at 0.2,
0.24, 0.2 and 0.25 mm for backtothefuture, somatotopy, retinotopy and tonotopy
tasks respectively, indicating that 95% of the data exhibits minimal motion. Violin
plots (second column) evaluate FD on a run or condition-specific level. Across all
runs and conditions, FD distributions remain consistent, with median values below
0.2 mm and most of the values below 0.3 mm (for all tasks). These results
underscore that head motion was well-controlled throughout the study, minimising
potential motion-related artefacts in the data.
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Figure 2. Framewise displacement distributions across all participants for each task and run.
The figure shows the distributions for each task separately by row: backtothefuture,
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somatotopy, retinotopy, and tonotopy. The first column depicts the distribution of FD across
all participants and TRs. The second column shows violin plots and overlaid boxplots display
the distribution of FD for each run or condition across all participants. Each violin plot
represents the density of FD values, with the boxplot inside showing the interquartile range
(IQR), median, and whiskers (minimum and maximum values within 1.5×IQR).
Table 3 shows descriptive statistics for head motion parameters across each
task and run. It reports the mean, median, and maximum values for three rotational
(Roll, Pitch, Yaw; in degrees) and three translational components (Superior-Inferior
(dS), Left-Right (dL), Posterior-Anterior (dP); in millimetres). Overall, the mean
displacements for both rotational and translational motion remained within ±0.1
degrees and millimetres, respectively. Mean maximum values for all motion
parameters across all tasks were below 0.5, with the exception of the
backtothefuture task, where maximum displacements in pitch and dS approached
1.0 degree/millimetre across all runs. Despite minor variations between tasks and
runs, overall motion levels were low, suggesting minimal motion-related artefacts in
subsequent analyses.
Mean Mean maximum
Task Run Roll Pitch Yaw dS dL dP Roll Pitch Yaw dS dL dP
backtothef
uture
1 -0.01 -0.01 0.02 -0.02 -0.08 -0.03 0.25 0.63 0.36 0.6 0.19 0.45
2 -0.05 0.09 0.04 -0.05 -0.03 -0.03 0.28 0.92 0.44 0.7 0.25 0.48
3 -0.02 0 -0.03 0.02 -0.06 -0.04 0.3 0.84 0.45 0.94 0.28 0.44
somatotopy
1 -0.02 0.01 -0.01 0.02 -0.01 -0.04 0.17 0.46 0.22 0.32 0.17 0.36
2 -0.01 0 0.02 0 -0.02 -0.02 0.18 0.45 0.22 0.38 0.16 0.4
retinotopy
1 -0.01 0.1 -0.01 -0.03 -0.01 -0.08 0.14 0.48 0.17 0.21 0.12 0.28
2 0 0.09 0.02 0.03 0.01 -0.08 0.11 0.43 0.17 0.34 0.12 0.23
3 -0.02 0.08 0.02 0.04 -0.02 -0.07 0.09 0.48 0.18 0.34 0.1 0.23
tonotopy
1 -0.02 0.09 -0.01 0 0 -0.02 0.12 0.43 0.14 0.26 0.1 0.23
2 0.01 0 0.02 0.04 0.02 -0.02 0.15 0.36 0.21 0.44 0.16 0.3
Table 3. Descriptive statistics for head motion parameters across each task and run. Each
cell represents the mean, median, or maximum value of framewise displacement per run.
Tasks include backtothefuture, somatotopy, retinotopy, and tonotopy, with up to three runs
per task.
Inter-subject correlation during movie-watching
The inter-subject correlation (ISC) analysis was undertaken on all participants
to show the timing alignment and the quality of functional MRI data during
backtothefuture task. ISC is a data-driven method that quantifies shared temporal
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fluctuations in brain activity across participants (Nastase et al., 2019) . It is commonly
used to assess synchronization of neural responses during naturalistic paradigms.
Six participants were excluded from this analysis (see Usage Notes for details).
The ISC values were calculated using AFNI tools (3dTcorrelate and 3dISC).
Pairwise ISCs were computed for every unique pair of participants using Pearson
correlation and Fisher z-transformation. Once all pairwise ISC maps were generated,
a group-level statistical model was estimated using mixed-effects modelling that
treated both participants in each pair as random intercepts. To assess statistical
significance, t-statistics were subsequently corrected for multiple comparisons using
the False Discovery Rate (FDR) procedure at a threshold of q < 0.001. The ISC
values are shown in Figure 3 below.
Figure 3. Inter-subject correlation map. Voxelwise inter-subject correlation (ISC) during Back
to the Future viewing, computed across 34 participants after excluding six with alignment
issues (see Usage Notes). Statistical significance was assessed with voxelwise t-tests and
controlled for multiple comparisons using the False Discovery Rate (FDR) procedure at q <
0.001 (two-tailed). No additional cluster-size threshold was applied.
High ISC values across early sensory cortices further indicate accurate
temporal alignment across participants. This suggests that both stimulus
presentation and preprocessing preserved the temporal structure of the data,
ensuring that stimulus-locked neural responses were synchronized across
individuals. The resulting ISC maps show robust inter-subject synchronization across
widespread cortical regions, including primary auditory and visual cortices, as well as
posterior medial areas (precuneus, posterior cingulate). These regions are
consistent with previous findings in the literature and reflect reliable, stimulus-locked
processing during naturalistic movie-watching tasks (Aliko et al., 2020; Hasson et al.,
2004; Lerner et al., 2011).
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Eye-tracker quality control
Each participant underwent a standard 9-point calibration and validation
procedure prior to each run of the backtothefuture task. To quantify calibration
quality, the average and maximum errors for each eye and each run for all
participants were extracted from corresponding eyelink asc files. The table with
average and maximum errors per participant, run, and eye is available in the
Supplementary Materials.
Following SR Research guidelines, calibration accuracy was classified as
GOOD when the average error was below 1.0° and the maximum error was below
1.5°, FAIR when the average error ranged between 1.0° and 1.5° or the maximum
error between 1.5° and 2.0°, and POOR when the average error exceeded 1.5° or
the maximum error exceeded 2.0°
(https://www.sr-research.com/support/showthread.php?tid=244). Across all
calibration entries (N = 234), the mean average error was 0.46° (SD = 0.19°), and
the mean maximum error was 1.03° (SD = 0.82°). Based on the classification criteria
from the guidelines, 212 calibrations (90.6%) were labeled as GOOD, 13 (5.6%) as
FAIR, and 9 (3.8%) as POOR.
Since we used a binocular setup, we adopted the following approach for
run-level quality classification: if at least one eye showed GOOD calibration, the run
was considered GOOD. Under this criterion, only 3 runs were labeled POOR and 2
as FAIR, while all remaining runs met the GOOD threshold for at least one eye (and
in most cases, for both eyes). These results indicate a high level of calibration
accuracy and confirm the overall quality of the eye-tracking data.
Somatotopic mapping
To assess the quality and specificity of the somatotopic mapping, we first
estimated participant-level beta coefficients using a general linear model
(implemented in AFNI's 3dDeconvolve function with dmUBLOCK(1) parameter),
modeling each body movement separately. Individual results were visually inspected
to ensure expected activation patterns and data quality. We examined group-level
activation maps for three contrasts between different body part movements: Face vs
Feet, Face vs Hand, and Hand vs Tongue. For each participant, condition contrasts
(Face vs Feet, Face vs Hand, and Hand vs Tongue) were computed within
3dDeconvolve, resulting in subject-level contrast beta maps. At the group level,
these contrast betas were then entered into a one-sample t-test to assess
consistency across participants. As shown in Figure 4, the three contrasts show the
activation maps aligned with the canonical somatotopic organisation along the
precentral and postcentral gyri. Specifically, face-related activity was localized to the
inferior-lateral portion of the sensorimotor cortex. Tongue-related activations were
found ventrally, with strong effects in lateral sensorimotor regions and inferior
pre/postcentral areas. In contrast, feet-related activity was located dorsomedially,
while hand activations occupied intermediate dorsolateral regions of the central
28
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sulcus. The results are consistent with the known motor and somatosensory
homunculus, indicating both the spatial specificity and sensitivity of the task and data
acquisition.
Figure 4. Somatotopic mapping. Group-level statistical activation maps are displayed for
three pairwise contrasts: Face vs Feet, Face vs Hand, and Hand vs Tongue, each rendered
on a standard MNI space in axial, coronal and sagittal planes. Colors represent voxel-wise
t-values, thresholded at t > 5, corresponding to p < 0.00001. Red to white colour indicates
regions showing significantly greater activation for the first body part in each contrast, while
blue to dark blue colour indicates greater activation for the second body part.
Retinotopic mapping
To evaluate the quality of the retinotopic mapping, we first estimated pRF
parameters for each participant separately. Each participant’s eccentricity and polar
angle maps were visually inspected for anatomical consistency, smoothness of
topographic gradients, and the presence of expected retinotopic features. This
evaluation was qualitative, focusing on whether the maps displayed coherent and
interpretable organization across early visual areas.
Participants 07, 17, and 29 were excluded from the group-level analysis due
to poor retinotopic map quality. Although data were collected for these individuals,
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their maps lacked coherent topographic organization, showing either excessive noise
or fragmented patterns without the expected polar angle reversals or eccentricity
gradients. As a result, these maps could not be reliably interpreted and were omitted
from the mean maps across all participants.
To show the quality of the retinotopy task, the maps were averaged across all
the remaining participants to get a grand average map (Fig. 5). Polar angle shows
the well-known pattern along the calcarine sulcus and around the occipital cortex. In
both hemispheres, polar angle values smoothly transition from the horizontal
meridians (coded in green) to upper and lower vertical representations (coded in
blue and red, respectively) , consistent with known topography in areas V1, V2, and
V3. Eccentricity maps show a clear central-to-peripheral gradient, with foveal
representations located at the occipital pole (coded in blue) and peripheral regions
exhibited more anteriorly (green). The resulting maps show well-organized and
expected representations of both polar angle and eccentricity on inflated cortical
surfaces of each hemisphere.
Figure 5. Retinotopic mapping. pRF results for the left and right hemispheres displayed on
inflated cortical surface reconstructions. Columns from left to right show: cortical curvature
(dark gray, sulci; light gray, gyri) with anatomical landmarks labeled (IPS, intraparietal sulcus;
POS, parieto-occipital sulcus; LOS, lateral occipital sulcus; Calc, calcarine sulcus; OTS,
occipito-temporal sulcus; CoS, collateral sulcus); polar angle maps indicating visual field
representation (color wheel inset); eccentricity maps showing distance from fixation (scale
inset, center 0°, periphery 7°); estimated pRF size (in degrees of visual angle, color scale
inset); and variance explained by the pRF model (in %, color scale inset). Black lines
delineate visual area boundaries (V1–V3). Rows correspond to the left hemisphere (top) and
right hemisphere (bottom).
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Usage notes
The NNDb-3T+ dataset provides a uniquely rich multimodal resource for
studying the brain under naturalistic conditions and individual differences across
multiple domains (somatotopy, retinotopy and tonotopy). The dataset combines
high-quality fMRI data from a full-length movie-watching paradigm and somatotopy,
retinotopy, and tonotopy tasks, eye-tracking data, physiological recordings, and
extensive behavioral measures.
Practical considerations
Several participants were excluded from inter-subject correlation analyses
due to interruptions or inconsistencies during the movie task. These participants
should be carefully considered for any time alignment-sensitive analysis and
potentially excluded or adjusted. For many analyses, these participants could still be
used.
sub-01: scanning stopped near the end of run 2 which means that the last 152 TRs
of the run were not acquired. Run 3 was collected with no issues.
sub-02: incorrect lengths of runs. The movie files were cut incorrectly: run 2 is
missing the final 12 seconds, while run 3 includes those 12 seconds again (overlap
with run 2). The perfect alignment can’t be guaranteed.
sub-03: scan stopped 55 seconds (37 TRs) before the end of run 2. Run 3 was
collected with no issues.
sub-05: the anatomical MRI is missing due to technical reasons.
sub-10: movie stopped ~15 minutes (511 TRs) before the end of run 3 due to
participant scheduling conflict.
sub-24 and sub-36: paused during run 1 using the implemented pause/resume
functionality (see below). Run 1 is not recommended for time-sensitive analysis; run
2 and 3 were collected with no issues.
The presentation MATLAB script for backtothefuture task included a pause
functionality for situations in which participants squeezed the alert ball, indicating a
need for a break during the run, or if the movie needed to be stopped for any reason.
If the movie was paused (by pressing ‘P’ on the keyboard), it froze on the last frame
displayed and waited for the ‘R’ key to be pressed to resume. When ‘R’ was pressed,
the movie rewound by 12 seconds and paused for eight spare TRs from the scanner.
The operator adjusted the protocol to ensure the correct number of TRs for the
remainder of the movie and resumed scanning when the participant was ready. This
functionality was used with sub-24 and sub-36, both of whom paused during the first
part of the movie. In the first case, the participant initially needed a bathroom break
but decided to finish the first run and use the bathroom during the break between
runs. In the second case, the participant appeared sleepy, prompting the operator to
stop the scanning and allow a short break inside the scanner. After five minutes, the
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scanning resumed. In both cases, the pause resulted in two files for the first run,
labelled with the prefixes ‘beforepause’ and ‘afterpause’ to distinguish them.
The database includes both raw and preprocessed MRI data, with
preprocessing pipelines designed to follow best practices for functional neuroimaging
using AFNI, Freesurfer, MATLAB and Python. These pipelines are tailored to the
specific structure and goals of each task. However, we emphasize that no single
preprocessing strategy is optimal for all hypotheses or analytical approaches.
Depending on the research question, users may wish to modify aspects of the
pipeline such as spatial smoothing, alignment methods, filtering, nuisance
regression, or motion censoring thresholds. We encourage users to consult the
accompanying GitHub repository (see Code availability ), which provides all
preprocessing scripts, quality control reports, and logs. Reviewing these materials
can help ensure reproducibility, clarify processing decisions, and guide adaptations
for custom workflows.
Several components of the NNDb-3T+ dataset are not included in the current
release but will be made available in future versions. Individual-level tonotopy maps
are currently undergoing preprocessing and validation. These maps will allow
researchers to investigate auditory cortical organization and model tonotopic
gradients across participants.
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