MDL-001: An Oral, Safe, and Well-Tolerated Broad-Spectrum Inhibitor of Viral Polymerases

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Abstract

ABSTRACT The death toll and financial stress posed by the recent COVID-19 pandemic have highlighted the pressing need to develop safe and effective, broad-spectrum inhibitors to treat viral infections. To accelerate the antiviral drug discovery process, we developed GALILEO™, a computational platform that interfaces with a customizable bioinformatics pipeline with a geometric deep learning algorithm we named ChemPrint™ for in silico drug screening. Combining these algorithms with a large chemical repositioning library, we discovered MDL-001, which interacts with the Thumb pocket 1 subdomain of multiple single-stranded RNA viruses. For MDL-001, we demonstrate potent in vitro activity against a broad spectrum of pathogenic viruses, and we demonstrate potent in vivo efficacy in a mouse model of SARS-CoV-2 infection. In clinical trials, orally administered MDL-001 has been shown to be safe and well tolerated. These data underline both the effectiveness of the GALILEO™ platform for drug discovery and the promise of MDL-001 as a novel broad-spectrum antiviral clinical candidate.
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Viviana Simon , Adolfo García-Sastre , Kris M White , William F Brubaker , Davey Smith , Daniel Haders doi: https://doi.org/10.1101/2025.01.13.632836 Virgil Woods 1 Model Medicines , La Jolla, CA, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Tyler Umansky 1 Model Medicines , La Jolla, CA, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Sean M Russell 1 Model Medicines , La Jolla, CA, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Briana L McGovern 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 3 The Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Romel Rosales 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 3 The Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site M Luis Rodriguez 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 3 The Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Harm van Bakel 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 4 Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai , New York, NY, USA 5 Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 6 Department of Artificial Intelligence and Human Health, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site ORCID record for Harm van Bakel Emilia Mia Sordillo 7 Department of Pathology, Molecular and Cell based Medicine, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site ORCID record for Emilia Mia Sordillo Viviana Simon 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 3 The Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA 7 Department of Pathology, Molecular and Cell based Medicine, Icahn School of Medicine at Mount Sinai , New York, NY, USA 8 Center for Vaccine Research and Pandemic Preparedness, Icahn School of Medicine at Mount Sinai , New York, NY, USA 9 Division of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Adolfo García-Sastre 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 3 The Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA 7 Department of Pathology, Molecular and Cell based Medicine, Icahn School of Medicine at Mount Sinai , New York, NY, USA 9 Division of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai , New York, NY, USA 10 Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Kris M White 2 Department of Microbiology, Icahn School of Medicine at Mount Sinai , New York, NY, USA 3 The Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site William F Brubaker 11 Farmington Pharma Development Find this author on Google Scholar Find this author on PubMed Search for this author on this site Davey Smith 12 School of Medicine, University of California , San Diego, La Jolla, CA, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site Daniel Haders 1 Model Medicines , La Jolla, CA, USA Find this author on Google Scholar Find this author on PubMed Search for this author on this site For correspondence: tools{at}modelmedicines.com Abstract Full Text Info/History Metrics Supplementary material Preview PDF ABSTRACT The death toll and financial stress posed by the recent COVID-19 pandemic have highlighted the pressing need to develop safe and effective, broad-spectrum inhibitors to treat viral infections. To accelerate the antiviral drug discovery process, we developed GALILEO™, a computational platform that interfaces with a customizable bioinformatics pipeline with a geometric deep learning algorithm we named ChemPrint™ for in silico drug screening. Combining these algorithms with a large chemical repositioning library, we discovered MDL-001, which interacts with the Thumb pocket 1 subdomain of multiple single-stranded RNA viruses. For MDL-001, we demonstrate potent in vitro activity against a broad spectrum of pathogenic viruses, and we demonstrate potent in vivo efficacy in a mouse model of SARS-CoV-2 infection. In clinical trials, orally administered MDL-001 has been shown to be safe and well tolerated. These data underline both the effectiveness of the GALILEO™ platform for drug discovery and the promise of MDL-001 as a novel broad-spectrum antiviral clinical candidate. Introduction Pandemic and epidemic viral outbreaks have occurred throughout documented history, but never as frequently as in the past 25 years 1 , including the recent severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) 2 . The COVID-19 pandemic caused by SARS-CoV-2 is widely regarded as the worst viral outbreak since the Great Flu in 1918 1 resulting in millions of deaths worldwide and unspeakable financial losses. As a result of the COVID-19 pandemic, high-stakes viral surveillance and drug development projects have been established to prevent another devastating pandemic 4 . Special attention was placed on viruses that have caused recent epidemics 4 , 5 , including Ebola virus (EBOV) 6 , Influenza virus types A and B (IAV and IBV, respectively) 7 , Norovirus (NoV) 8 , SARS-CoV-1/2 9 , 10 , and Zika virus (ZIKV) 11 . Unfortunately, oral, safe, broad-spectrum antivirals are not available should a new outbreak of these or new viruses occur 12 . This lack of antiviral availability is likely because the paradigm for treating viral diseases is the “one bug, one drug” paradigm, which necessitates diagnosing the type of viral infection before treatment can begin 13 . This is problematic even when there is not a pandemic, as in regular clinical practice pathogen identification often takes time and can be marred by false positive or negative identifications 13 . Analogous to broad-spectrum antibiotics used after clinical diagnosis, broad-spectrum antivirals could obviate the need for testing before starting treatment. A broad-spectrum antiviral, especially one that can be administered orally, would allow for earlier and wider spread treatment, and such a drug would greatly augment our preparedness for future viral pandemics 14 . To overcome these and other therapeutic roadblocks, the National Institute of Allergy and Infectious Diseases (NIAID) has developed a target product profile (TPP) to guide the development of future antivirals ( Table 1 ), emphasizing the need for broad-spectrum activity against emergent viruses with pandemic potential and the importance of drug leads with novel inhibitory mechanisms 15 . Leading experts have also described the ideal antiviral Target Product Profile (TPP), advocating for an orally available medication that can be administered as a single daily dose for acute infections, supporting rapid and straightforward administration in urgent or initial outbreak scenarios 12 . Accordingly, the Center for Disease Control (CDC) emphasizes the need for new oral antivirals with no monitoring requirements 16 . View this table: View inline View popup Download powerpoint Table 1. Comparison of MDL-001 to the NIAID Target Product Profile for SARS-COV-2. Minimal desired attributes are shown in blue, while optimal attributes are in red. The properties of MDL-001 have been colored to convey whether they more closely reflect the minimal attributes (blue), the optimal attributes (red), somewhere between minimal and optimal (purple), or exceed even optimal attributes (green). Due to its essential role in genome replication, the catalytic pocket in viral polymerases has long been an antiviral drug target 17 , 18 . Because the catalytic pocket of viral polymerases is highly conserved across many pathogenic viruses, molecules developed to target this site are expected to have broad-spectrum activity. However, recent epidemic and pandemic outbreaks have unveiled the limitations of this approach 19 . Motivated by the need to develop new viral polymerase inhibitors, we recently developed a geometric deep learning algorithm (ChemPrint™) 20 , as part of a suite of bioinformatics tools that interface with a computational platform, we named GALILEO TM 21 . Using GALILEO™, we identified, from a large chemical repositioning library, the small molecule we named MDL-001 that interacts in silico with Thumb pocket 1, an allosteric subdomain in viral polymerases 21 . This prior study also revealed that Thumb pocket 1 is structurally conserved across many positive-sense single-stranded RNA viruses, suggesting that inhibitors of this domain may have broad-spectrum potential 21 . Small molecule inhibitors targeting the HCV Thumb pocket 1 have been discovered over the past 10 years, with several having entered clinical trials 22 - 25 . Unfortunately, these small molecule inhibitors were only developed for HCV 22 - 25 , and not for other similar viruses, which share a conserved Thumb pocket 1 structure. In this study, we assessed the in vitro antiviral potency of MDL-001 in a diverse panel of pathogenic viruses, presenting strong evidence that this compound is a broad-spectrum antiviral drug lead. In mice, we found that MDL-001 kills a mouse-adapted SARS-CoV-2 variant and that it accumulates in the target tissue (lung) at concentrations far higher than its in vitro EC 50 . Results In vitro antiviral potency of MDL-001 against a diverse panel of pathogenic viruses The in vitro validation of drug candidates identified in computational approaches is a hallmark in the drug development pipeline. Based on our previously reported in silico studies 21 , MDL-001 was hypothesized to be a broad-spectrum antiviral small molecule inhibitor because the Thumb pocket 1 region in viral RNA-dependent RNA polymerase (RdRp) is well-conserved across many pathogenic viruses 26 , 27 . To test this hypothesis, we assessed the in vitro potency of MDL-001 in a panel of 13 cell line-based pseudovirus expression assays. These included 10 +ssRNA viruses (six SARS-CoV-2 variants, two coronavirus types, plus HCV and NoV), and 2 −ssRNA viruses (IAV-H1N1 and IAB) ( Figure 1 and Supplementary Table 1 ). MDL-001 had submicromolar potency against all six SARS-CoV-2 variants (Wuhan isolate WA1, Alpha, Beta, Delta, and Omicron variants, as well as a mouse-adapted variant SARS-CoV-2 MA), and the two coronaviruses tested (Alphacoronavirus and Betacoronavirus). Our results also showed that MDL-001 had lesser but still significant potency (EC 50 = 3-8 μM) against the remaining +ssRNA viruses (HCV, and NoV), and the −ssRNA viruses (IAV and IAB) ( Figure 1 and Supplementary Table 1 ). Download figure Open in new tab Figure 1. Family tree diagram of 4 viral families, 13 viruses and variants for which MDL-001 exhibited sub 10 μM antiviral activity. The best EC 50 values obtained for each virus/strain/variant obtained across 29 assays are plotted. Complete results including SI 50 calculations can be found in Supplementary table S1 . MDL-001 Lung, C max concentrations in mice after Multiple Dose (MD) and Single Dose (SD) of 250 mg/kg QD dosing as measured in PK studies reported below are shown as green and blue dashed lines, respectively. In vivo antiviral efficacy of MDL-001 in mice infected with MA-SARS-CoV-2 We next investigated the in vivo antiviral efficacy of MDL-001 in mice infected with a mouse-adapted (MA) viral variant, named MA-SARS-CoV-2. We found that MDL-001 ameliorated body weight loss and viral accumulation in the lung in a dose-dependent manner ( Figure 2 ). The reduction in body weight loss by MDL-001 compared to the vehicle became statistically significant on days 2 and 3. Furthermore, the two highest MDL-001 doses (250 and 375 mg/kg BID) resulted in a body weight loss reduction similar in magnitude to our findings for remdesivir ( Figure 2A ). Noticeably, the decrease in viral lung titers upon treatment with MDL-001 mirrored the dose-dependent pattern observed for weight loss, supporting the notion that a reduction in weight loss provoked by viral infection was correlated to virus clearance ( Figure 2B ). Download figure Open in new tab Figure 2. In vivo antiviral efficacy of MDL-001 in mice infected with MA-SARS-CoV-2 (A) 129/S mice were intranasally infected with 2.5×10 4 PFU of MA-SARS-CoV-2 and treated orally with MDL-001 or subcutaneously with 100 mg/kg remdesivir twice daily for 3 days. Animal weights were monitored daily. N = 9 per group. (B) SARS-CoV-2 titers in the lungs were determined on day 3 post-infection. N = 9. (A-B) tested by two-way ANOVA (*P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001). Direct-acting small molecules are expected to exert a dose-dependent response effect, upon interaction with their receptor. The dose-dependent reduction in body weight loss and the decrease in viral levels in the lungs, upon MDL-001 treatment, were in accordance with our prediction of a specific MDL-001/Thumb pocket 1 interaction 21 . Significantly, MDL-001 prevention of body weight loss mirrored those observed for remdesivir, even though drugs administered subcutaneously (remdesivir) undergo a faster biodistribution than following oral administration (MDL-001) 28 . In vivo pharmacokinetics (PK) To determine the pharmacokinetics (PK) of MDL-001 in rats, we first assessed MDL-001 biodistribution in plasma and lung following single oral doses. The maximum plasma concentration (C max ) and bioavailability (AUC last ) upon administration of the highest dose (1000 mg/kg) of MDL-001 increased by approximately 1.5-fold and 2-fold, respectively, compared to the lowest treatment (250 mg/kg) ( Figure 3 ). The mean absorption/clearance (T max ) and half-life (t 1/2 ) in the lowest and highest concentrations had a time bracket of 5–6 h ( Supplementary Table S3 ). In rat lungs, MDL-001 reached remarkably high levels, compared to those in plasma, with C 24h lung/plasma ratios between 97–122 across the dose range ( Supplementary Table S4 ). Download figure Open in new tab Figure 3. Plasma and Lung concentrations of MDL-001 in male SD rats. Rats were given a single administration of 250 mg/kg (Group 1), 500 mg/kg (Group 2), 750 mg/kg (Group 3), 1000 mg/kg in male SD rats (Group 4). MDL-001’s EC 50 range (0.52 μM −0.83 μM; 237 ng/mL - 379 ng/mL, gray) against SARS-CoV-2 variants is labeled. To determine the pharmacokinetics (PK) of MDL-001 in mice, drug concentrations in plasma and lung were measured following administration of two dose concentrations, each in two different drug dosage regimens. One regimen entailed a single dose of each concentration. The other regimen comprised a daily administration of each dose concentration over the course of five days ( Supplementary Table S5 ). In all cases, the plasma C max increased in a dose-dependent manner. Overall, we found that MDL-001 absorption and clearance were faster in mice, compared to rats. MDL-001 plasma levels were quantifiable at the first time point (0.5 h); and the t 1/2 was 2-4 h, approximately 2-fold faster than the one in rats (t 1/2 in rats 5–6 h). ( Figure 4 and Supplementary Table S5 ). Download figure Open in new tab Figure 4. The plasma and lung tissue concentrations and pharmacokinetics of MDL-001 in female 129S1 mice. Plasma and lung concentrations of MDL-001 were evaluated following (A) single and (B) 5-day repeat oral (PO) administrations at 50 mg/kg and 250 mg/kg. MDL-001’s EC 50 range (0.52 μM - 0.83 μM; 237 ng/mL - 379 ng/mL, gray) against SARS-CoV-2 variants is labeled. Like in mouse plasma, MDL-001 accumulation in mouse lungs was remarkably high and very similar in the two drug administration regimens. The lung/plasma AUC last ratios showed a similar pattern in the two dose regimens tested. In the low-dose (50 mg/kg) experiments, the lung/plasma AUC last ratio was 65 in the single-dose and 56 in the 5-day regimen. In the high-dose (250 mg/kg) experiments, the lung/plasma AUC last ratio was 36 in the single-dose and 44 in the 5-day regimen ( Supplementary Table S6 ). Compared to its value in plasma (T max = 2-6 h), the T max in the lung after the last dose on day 5 was between 4-8 h. This suggested a slower biodistribution to the lung than we observed in rats. In vivo safety and tolerability MDL-001 is an investigational new drug (IND), which had previously undergone preclinical and clinical evaluation in rodents and humans, respectively 29 , 30 . In the present study, we further investigated the safety and tolerability of MDL-001 in rodents to assess potential adverse effects when used at doses as high as 1000 mg/kg ( Supplementary Table S2 ). Rats received single oral doses of MDL-001 at four concentrations: 250 mg/kg, 500 mg/kg, 750 mg/kg, or 1000 mg/kg and after drug administration, clinical signs of toxicity, body weight changes, and clinical chemistry parameters were recorded. No significant toxicity was observed in these assays and all animals behaved normally during the experiment, even when rats were treated with 1000 mg/kg, corroborating the tolerability of MDL-001 ( Supplementary Table S2 ). We also collected safety and tolerability data in mice. In these experiments, mice were treated with a range of MDL-001 dose concentrations, repeated once or twice daily, as indicated in Table 2 . In all cases, mice were monitored for adverse effects, and detailed observations were recorded. Overall, no adverse reactions were observed in these studies and all animals behaved normally. View this table: View inline View popup Download powerpoint Table 2. Summary of drug concentrations, method of administration, and duration over which animals were observed for the tolerability studies of MDL-001 in mice and rats performed by us and published studies. Discussion In the present study, we show that MDL-001 has broad-spectrum antiviral activity against four RNA viral families, all of which have pandemic potential ( Figure 1 ). Our results revealed that MDL-001 has submicromolar potency against the eight +ssRNA Coronaviruses tested (six SARS-CoV-2 variants, plus Alphacoronavirus, and Betacoronavirus), with sub-10uM potency against HCV, NoV (+ssRNA viruses), and two Influenza types, H1N1 and B (-ssRNA viruses) ( Figure 1 ). The potency in all cases is orders of magnitude lower than the C max obtained in lung ( Figures 3 - 5 ). In the past, successful antiviral drug development programs have targeted primarily two types of viral proteins, proteases (e.g., nirmatrelvir in Paxlovid™) or the the catalytic pocket in viral polymerases (remdesivir in Veklury™). These inhibitors target a single or a limited number of virus families and have been plagued by toxicities. Our data demonstrate that MDL-001, which targets Thumb pocket 1, a novel allosteric subdomain in viral polymerases 21 , is a direct-acting, truly broad-spectrum antiviral. With this evidence we have provided validation of the GALILEO™ platform 24 for fast and effective drug discovery. In a preclinical setting our results indicate that MDL-001 also has in vivo antiviral efficacy comparable to that of remdesivir (Veklury) in a mouse model of SARS-CoV-2 infection ( Figure 2 ). Moreover, the magnitude with which MDL-001 reduced viral accumulation in the lung (2.9 Log 10 ) was significantly higher than the one recently reported for nirmatrelvir (1.4 Log 10 with 300 mg/kg and 1.9 log 10 with 1000 mg/kg), which is the active ingredient in Paxlovid 31 . Thus, MDL-001 has preclinical antiviral efficacy attributes similar if not greater than two FDA-approved drugs to treat COVID-19, Veklury 32 and Paxlovid 33 . In pharmacokinetic studies using mice and rats, we show that MDL-001 is tolerable at concentrations as high as 1000 mg/kg, and that it accumulates in lung (the site of infection) at levels 10-40 times higher than the submicromolar EC 50 values obtained in in vitro assays ( Figures 3 - 5 ). The rapid and sustained accumulation of MDL-001 in the lung, provides for exceptional EC 50 /C max ratios and minimizes viral infection, plotted in Figure 5 . Download figure Open in new tab Figure 5. MDL-001 concentration in respiratory tissue is many fold greater than the EC 50 against ILI-viruses at safe doses. The fold differences are shown in (A) mice and (B) rats. MDL-001’s EC 50 = 0.668 μM (305 ng/mL) against the SARS-CoV-2 Beta variant was chosen for normalization as it is the lowest EC 50 that also shows an SI>10. MDL-001 was initially developed in another indication and was previously investigated in Phase I human clinical trials 29 , 30 . Its chemical name is pipendoxifene 34 and was labeled ERA-293 in clinical trials 29 , 30 . In both human studies, with dosing up to 200 mg/day for 28 days, MDL-001 was well tolerated with only mild transient, adverse events observed at all doses ( Table 3 ). In these studies MDL-001 was tested in nearly 100 human volunteers with no Grade 3 or 4 adverse events, supporting its safety. These studies concluded that MDL-001 is orally available, has once-a-day dosing potential, and did not show any significant safety risks, such as genotoxicity or liver/hepatic toxicity. View this table: View inline View popup Download powerpoint Table 3. Safety and Tolerability summary of previous clinical studies of MDL-001 in humans. In conclusion, MDL-001 is a promising broad-spectrum antiviral drug with the characteristics of an “ideal target product profile (TPP)”, as laid out by the NIAID 15 . ( Table 1 ). The clinical antiviral efficacy of MDL-001 should be pursued to provide additional therapeutic options for the next viral pandemic and future preclinical studies should focus on assessing a larger collection of RNA viruses, to determine the breadth of MDL-001’s antiviral efficacy. Last, the results presented here help consolidate GALILEO™ and ChemPrint™, as useful AI tools, for the discovery of new chemistry and biology, as a preamble to the development of much-needed drugs against intractable diseases. Methods In vitro potency We assessed the in vitro antiviral potency of MDL-001 with a panel of 14 viral variants from eight pathogenic viruses across four ssRNA viral families ( Figure 1 ). Coronaviridae (+ssRNA): SARS-CoV-2 variants, including Alpha, Beta, Delta, Omicron, the initial Wuhan isolate (WA1), a mouse-adapted (MA) variant, HCV and NoV. Flaviviridae Orthomyxoviridae (-ssRNA): Influenza A H1N1/WSN/33 and Influenza B Yamagata/Brisbane and Victoria/Florida variants. We determined antiviral potency based on half maximal effective concentration (EC 50 ) and 50% cytotoxicity concentration (CC 50 ), which in turn allowed us to determine the half maximal selective index (SI 50 ), after dividing CC 50 by EC 50 . The antiviral assays were cell line based and consisted in transfecting a pseudovirus version of each of the viruses tested, in a compatible cell line. Upon infection and after drug treatment, viral survival and cell toxicity were reported from the readout of three different assays, cytopathic effect (CPE) 35 , viral yield Reduction (VYR) 36 , or immunofluorescence (IF) 37 . A breakdown of the results obtained can be found in Supplementary Table S1 . In vivo efficacy The in vivo efficacy of MDL-001 was evaluated using a mouse-adapted (MA) SARS-CoV variant to simulate human disease in mice. The goal was to assess its therapeutic potential in a preclinical setting. We quantitated the readout values for two features: reduction in body weight loss, as a surrogate of symptomatic relief, and viral load. Data was analyzed by two-way ANOVA (*P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001). The symptomatic relief method tracks changes in body weight as an indicator of disease progression and treatment efficacy, as described elsewhere 38 . The dose range tested included 125 mg/kg BID, 250 mg/kg QD, 250 mg/kg BID, and 375 mg/kg BID. The viral yield reduction assays determine viral titers were quantified to measure the reduction in viral load following treatment with MDL-001, as described elsewhere 39 . The dose range tested included 125 mg/kg BID, 250 mg/kg QD, 250 mg/kg BID, and 375 mg/kg BID. In vivo pharmacokinetics To determine the pharmacokinetics (PK) of MDL-001 in mice and rats, we assessed its accumulation in plasma and lung along a longitudinal time course as described below. In SD rats we first assessed MDL-001 biodistribution in plasma and lung following single oral doses at four concentrations: 250 mg/kg, 500 mg/kg, 750 mg/kg, and 1000 mg/kg. In 129S mice, plasma and lung MDL-001 concentrations were measured following administration of two dose concentrations: 50 mg/kg and 250 mg/kg each in two different drug dosage regimens. One regimen entailed a single dose of each concentration. The other regimen comprised a daily administration of each dose concentration over the course of five days. In vivo safety and tolerability Safety and tolerability of MDL-001 were assessed in rat and mouse model experiments to determine any potential adverse effects upon drug treatment. In rat studies, 12 male Sprague Dawley (SD) specimens were used. We collected safety and tolerability data from male Sprague Dawley (SD) rats. Briefly, rats received single oral doses at four concentrations: 250 mg/kg, 500 mg/kg, 750 mg/kg, or 1000 mg/kg. Upon infection, clinical signs of toxicity, body weight changes, and clinical chemistry parameters were recorded. In mouse studies, the in vivo safety assays upon MDL-001 treatment were assessed in 151 mice. We also collected safety and tolerability data in female 129S mice. In these experiments, mice were treated with a range of MDL-001 dose concentrations (67, 125, 250, 375, 500, 750, or 1000 mg/kg), repeated once or twice daily. In all cases, mice were monitored for adverse effects, and detailed observations were recorded. Competing Interests The authors affiliated with Model Medicines declare the existence of a financial competing interest. Davey Smith reports the following competing interests: Consulting fees from Bayer, Lucira, Pharma Holdings, Evidera, Vx Biosciences, Gilead, and Red Queen Biosciences. Stock options from Fluxergy, Linear Therapies, and Model Medicines. Payments to his institution from the NIH. These entities have provided financial compensation, stock options, or institutional support within the past 36 months, potentially influencing, or that could give the appearance of potentially influencing the submitted work. Acknowledgments We would like to extend our sincere gratitude to Dr. Brett Hurst from Utah State University for his invaluable insights and contributions to this work. His expertise has been instrumental in advancing this research. Model Medicines, Inc. has utilized the non-clinical and pre-clinical services program offered by the National Institute of Allergy and Infectious Diseases. Footnotes Updating Acknowledgments Section to include mention of Model Medicines involvement with NIAID. References 1. ↵ Baker , R. E. et al. Infectious disease in an era of global change . Nature reviews. Microbiology 20 , 193 – 205 ( 2022 ). OpenUrl CrossRef PubMed 2. ↵ Piret , J. & Boivin , G. Pandemics Throughout History . Frontiers in microbiology 11 , 631736 ( 2020 ). OpenUrl PubMed 3. Government Accountability Office (GAO) . Infectious Disease Preparedness: Assessing Global Efforts and Opportunities for Improvement . https://www.gao.gov/products/gao-23-106089 ( 2023 ). 4. ↵ Bird , B. 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Science (New York, N.Y.) 285 , 110 – 3 ( 1999 ). OpenUrl CrossRef View the discussion thread. Back to top Previous Next Posted January 26, 2025. Download PDF Supplementary Material Email Thank you for your interest in spreading the word about bioRxiv. NOTE: Your email address is requested solely to identify you as the sender of this article. Your Email * Your Name * Send To * Enter multiple addresses on separate lines or separate them with commas. You are going to email the following MDL-001: An Oral, Safe, and Well-Tolerated Broad-Spectrum Inhibitor of Viral Polymerases Message Subject (Your Name) has forwarded a page to you from bioRxiv Message Body (Your Name) thought you would like to see this page from the bioRxiv website. Your Personal Message CAPTCHA This question is for testing whether or not you are a human visitor and to prevent automated spam submissions. 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