KOunt – A reproducible KEGG orthologue abundance workflow
preprint
OA: closed
CC-BY-4.0
Abstract
Summary Accurate gene prediction is essential for successful metagenome analysis. We present KOunt, a Snake-make pipeline, that precisely quantifies KEGG orthologue abundance. Availability and implementation KOunt is available on GitHub: https://github.com/WatsonLab/KOunt . The KOunt reference database is available on figshare: https://figshare.com/s/72fe3ed7dfbbdcd8b1e5 . Test data are available at https://figshare.com/ndownloader/files/39545968 and version 1.1.0 of KOunt at https://figshare.com/ndown-loader/files/39547273 . Contact [email protected] Supplementary information Supplementary data are available at Bioinformatics online.
My notes (saved in your browser only)
Citation neighborhood (no data yet)
We don't have any in-corpus citations linked to this paper yet. The paper's references may be in our DB but unresolved to ``paper_id`` (resolution happens at ingest when the cited DOI matches a row we already have). Run the cross-source citation reconcile pass to retry.
Source provenance
- europepmc
- last seen: 2026-05-19T01:45:01.086888+00:00
- unpaywall
- last seen: 2026-05-28T02:00:01.590549+00:00
License: CC-BY-4.0