GRanges: A Rust Library for Genomic Range Data

preprint OA: closed CC-BY-ND-4.0
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Abstract

Motivation The Rust programming language is a fast, memory-safe language that is increasingly used in computational genomics and bioinformatics software development. However, it can have a steep learning curve, which can make writing specialized, high performance bioinformatics software difficult. Results GRanges is a Rust library that provides an easy-to-use and expressive way to load genomic range data into memory, compute and process overlapping ranges, and summarize data in a tidy way. The GRanges library outperforms established tools like plyranges and bedtools. Availability The GRanges library is available at https://github.com/vsbuffalo/granges and https://crates.io/crates/granges .

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europepmc
last seen: 2026-05-20T01:45:00.602351+00:00
unpaywall
last seen: 2026-05-27T02:00:06.600101+00:00
License: CC-BY-ND-4.0