The IFN I response in tumor cells is shaped by PARP7–p300/CBP interactions through distinct loss- and gain-of-function mechanisms

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Abstract

PARP7, a mono-ADP-ribosyl (MAR) transferase, is a key suppressor of the type I interferon (IFN-I) IFNβ in various tumor cells and a validated drug target. This negative regulation is reversed by small-molecule inhibitors of PARP7 catalytic activity, resulting in increased IFN-β expression. Yet, the mechanism of action of PARP7 inhibitors remains unclear because the relevant substrates of PARP7-mediated MARylation are unknown. Using an optimized analog- sensitive chemical genetic (ASCG) approach, we identified the co-activators, p300 and CBP, as nuclear PARP7 substrates. We identified an α-helical domain in PARP7 essential for p300/CBP interaction, MARylation, and proteasome degradation. Disrupting PARP7–p300/CBP interaction prevents PARP7’s suppression of IFNβ in colorectal cancer cells. p300/CBP reciprocally regulate PARP7’s activity and nuclear localization. Intriguingly, treatment with PARP7 inhibitors increased IFNβ expression more than PARP7 knockout in a p300/CBP-dependent manner. Our findings suggest that in some contexts, IFNβ induction by PARP7 inhibitors occurs via two mechanisms: inhibiting MARylation of p300/CBP (loss-of-function) and stabilizing the PARP7– p300/CBP complex (gain-of-function). Teaser Chemical genetics discovery of p300 and CBP as substrates of PARP7 that are essential for PARP7-mediated regulation of IFNβ via a dual mechanism.
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Abstract PARP7, a mono-ADP-ribosyl (MAR) transferase, is a key suppressor of the type I interferon (IFN-I) IFNβ in various tumor cells and a validated drug target. This negative regulation is reversed by small-molecule inhibitors of PARP7 catalytic activity, resulting in increased IFN-β expression. Yet, the mechanism of action of PARP7 inhibitors remains unclear because the relevant substrates of PARP7-mediated MARylation are unknown. Using an optimized analog- sensitive chemical genetic (ASCG) approach, we identified the co-activators, p300 and CBP, as nuclear PARP7 substrates. We identified an α-helical domain in PARP7 essential for p300/CBP interaction, MARylation, and proteasome degradation. Disrupting PARP7–p300/CBP interaction prevents PARP7’s suppression of IFNβ in colorectal cancer cells. p300/CBP reciprocally regulate PARP7’s activity and nuclear localization. Intriguingly, treatment with PARP7 inhibitors increased IFNβ expression more than PARP7 knockout in a p300/CBP-dependent manner. Our findings suggest that in some contexts, IFNβ induction by PARP7 inhibitors occurs via two mechanisms: inhibiting MARylation of p300/CBP (loss-of-function) and stabilizing the PARP7– p300/CBP complex (gain-of-function). Teaser Chemical genetics discovery of p300 and CBP as substrates of PARP7 that are essential for PARP7-mediated regulation of IFNβ via a dual mechanism. Competing Interest Statement The authors have declared no competing interest.

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