Beyond accuracy: A Kernel-level Comparative Analysis of Quantum and Classical Support Vector Machines

Beyond accuracy: A Kernel-level Comparative Analysis of Quantum and Classical Support Vector Machines | Research Square window.SnipcartSettings = { analytics: { enabled: false } }; (function() { var accessVector = localStorage.getItem('access_vector') || ''; window.dataLayer = window.dataLayer || []; if (accessVector) { window.dataLayer.push({ user: { profile: { profileInfo: { snid: accessVector } } } }); } })(); (function(w,d,s,l,i){w[l]=w[l]||[];w[l].push({'gtm.start':new Date().getTime(),event:'gtm.js'});var f=d.getElementsByTagName(s)[0],j=d.createElement(s),dl=l!='dataLayer'?'&l='+l:'';j.async=true;j.src='https://www.googletagmanager.com/gtm.js?id='+i+dl;f.parentNode.insertBefore(j,f);})(window,document,'script','dataLayer','GTM-K279D39R'); Browse Preprints In Review Journals COVID-19 Preprints AJE Video Bytes Research Tools Research Promotion AJE Professional Editing AJE Rubriq About Preprint Platform In Review Editorial Policies Our Team Advisory Board Help Center Sign In Submit a Preprint Cite Share Download PDF Article Beyond accuracy: A Kernel-level Comparative Analysis of Quantum and Classical Support Vector Machines Shahryar Rza This is a preprint; it has not been peer reviewed by a journal. https://doi.org/ 10.21203/rs.3.rs-9057443/v1 This work is licensed under a CC BY 4.0 License Status: Under Review Version 1 posted 7 You are reading this latest preprint version Abstract Quantum kernel approaches have been touted as a possible way to gain representational advantages over classical machine learning techniques however most comparative work only looks at classification accuracy leaving the geometric structure of the kernels unexplored. We carry out a comprehensive kernel-level comparison between classical support vector machines (SVMs) with radial basis function (RBF) kernels and quantum support vector classifiers that use ZZFeatureMap and PauliFeatureMap fidelity kernels, tested on two synthetic and two real-world two-dimensional datasets. After applying centred kernel alignment(CKA), the Hilbert-Schmidt Independence Criterion (HSIC), eigenvalue spectrum analysis, spectral entropy, and effective rank. Firstly, shallow quantum kernels form a moderately aligned band with RBF across all datasets and conditions that is quite stable (CKA : 0.41 → 0.57), whereas going deeper in the circuit to two repetitions largely mismatches both alignment and accuracy with no representational gain (e.g. Iris cross-validation accuracy: 0.920 → 0.670, p = 0.0004). Secondly, depolarising noise surprisingly increases the quantum-classical kernel alignment, which means that near-term hardware kernels are structurally closer to RBF than noiseless simulations suggest. Thirdly, the scenarios that lead to maximum apparent quantum-classical divergence, small sample sizes and low noise, are precisely those most used to benchmark quantum kernel advantage. Kernel-level structural analysis is essential for meaningful evaluation of quantum machine learning methods. Physical sciences/Mathematics and computing Physical sciences/Physics Full Text Additional Declarations No competing interests reported. Cite Share Download PDF Status: Under Review Version 1 posted Reviews received at journal 12 Apr, 2026 Reviewers agreed at journal 03 Apr, 2026 Reviewers invited by journal 01 Apr, 2026 Editor assigned by journal 25 Mar, 2026 Editor invited by journal 24 Mar, 2026 Submission checks completed at journal 18 Mar, 2026 First submitted to journal 18 Mar, 2026 You are reading this latest preprint version Research Square lets you share your work early, gain feedback from the community, and start making changes to your manuscript prior to peer review in a journal. As a division of Research Square Company, we’re committed to making research communication faster, fairer, and more useful. We do this by developing innovative software and high quality services for the global research community. Our growing team is made up of researchers and industry professionals working together to solve the most critical problems facing scientific publishing. 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