ploidyNGS: Visually exploring ploidy with Next Generation Sequencing data
preprint
OA: closed
CC-BY-NC-ND-4.0
Abstract
Summary ploidyNGS is a model-free, open source tool to visualize and explore ploidy levels in a newly sequenced genome, exploiting short read data. We tested ploidyNGS using both simulated and real NGS data of the model yeast Saccharomyces cerevisiae . ploidyNGS allows the identification of the ploidy level of a newly sequenced genome in a visual way. Availability and implementation ploidyNGS is available under the GNU General Public License (GPL) at https://github.com/diriano/ploidyNGS . ploidyNGS is implemented in Python and R. Contact [email protected]
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- europepmc
- last seen: 2026-05-19T01:45:01.086888+00:00
- unpaywall
- last seen: 2026-05-26T02:00:01.498150+00:00
License: CC-BY-NC-ND-4.0