Materials and methods
Participants
We utilized the same dataset in our previous study. There were 13 participants with
ASD (11 males and 2 females, mean age: 30.3 years; range: 20-44 years) and 16
healthy controls (12 males and 4 females, mean age: 29.7 years; range: 19 - 46). The
clinical diagnosis was made for participants with ASD (details in Sun et al., 2012).
Each participant should give written informed consent. The study was approved by
the ethics committee of the Goethe University (Frankfurt, Germany) and conducted
by the ethical standards set by the Declaration of Helsinki.
Stimuli and task
A random sequence of Mooney stimuli, consisting of 60 upright and 30
inverted-scrambled stimuli, was presented for each run of the visual perception
experiment (Fig.1A). Each stimulus lasted 200 ms. The inter-stimulus interval ranged
between 3500 and 4500ms. Each participant with a hand assignment counterbalanced
over all participants should respond to each stimulus with an interactive device and
the responses were recorded on the presentation computer. At least four experimental
runs were involved for each participant.
==============
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Figure 1
==============
MRI data acquisition
Structural MR images were obtained from a 3T Siemens Allegra scanner with a head
coil. The protocol of the 3D MPRAGE sequence (160 slices, voxel size = 1 x 1 x 1
mm, FOV = 256, TR = 2300, TE = 3.93) was used during scanning. The positions of
the nasion and 1 cm anterior to the tragus of the left and right ear were marked with
vitamin-E pills to co-register the MEG and MRI data during the source localization.
MEG data acquisition
A 275-channel whole-head MEG system (Omega 2005; VSM MedTech) was used in
this study for MEG signals acquisition. A bandpass fourth-order Butterworth filter
was preset with a low-frequency cutoff of 0.5 Hz and a high-frequency cutoff of 150
Hz. MEG signals were recorded with a 600 Hz sample rate. The head position was
re-localized before each run to guarantee that the head movement was less than 5 mm
along three directions. Runs with strong movements were discarded. Behavioral
responses were recorded via a presentation computer. The differences in head
coordinates between participants and groups have been examined. They were not
significant and less than one electrode space of Euclidean distance for a typical EEG
system.
MEG data pre-processing
The MEG data was pre-processed using the FieldTrip Toolbox (Oostenveld et al.,
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2011). The trials were defined from the continuously recorded MEG from -1000 to
1000 ms concerning the onset of visual stimuli related to the face and no-face
conditions. Only data with correct responses was reserved. Others were discarded.
The data epochs contaminated with noises such as eye blinks, muscle activity, or
jump artifacts were removed. The automatic artifact detection and rejection routines
provided by the FieldTrip software were used during the trial detection. The triggers
detected with the Fieldtrip routines were imported into the Brainstorm software
(Tadel et al., 2011) for trial averaging. The averaged trial was filtered with a bandpass
3rd order filter with cutoff frequencies of 1Hz and 120Hz and corrected with baseline
(from -500ms to -100ms). The filtered data was further used for source localization.
Source localization
Each participant’s MRI was segmented using freesurfer software (Dale et al., 1999)
and imported into Brainstorm as the head model. The source localization was
performed by the minimum-norm estimate (MNE) method (Hämäläinen and
Ilmoniemi, 1994) in Brainstorm. This technique provides a method to estimate the
source power over the cortical surface using MEG sensors. Before initiating the
analysis, noise covariance and data covariance were both estimated.
Region of interest (ROI) definition
Two specific regions were chosen to measure the connectivity within the visual
perception system. The first region, primary visual area 1 (V1), was identified using
the Brodmann atlas (Brodmann, 1909). The second region, the fusiform gyrus area
(FG), was selected using the Desikan-Killiany atlas (Desikan et al., 2006). The areas
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of V1 and FG were anatomically separated, as shown in Figure 2. Time-coursed
sources from these regions of interest were extracted and averaged over each region
individually.
Phase amplitude coupling
The study examined the sources of V1 and FG over time to detect any changes in
alpha-gamma phase-amplitude coupling (PAC). Brainstorm was used to compute the
PAC values for phase frequencies ranging from 7-13Hz and amplitude frequencies
from 34-120Hz, starting from stimulus presentation (0.0ms) to 1000ms. The phase
step size was 1Hz. The amplitude-frequency step size was 2Hz. To determine which
gamma frequencies had the most significant changes in PAC, Seymour et al. (2017)
used a range of amplitude frequencies (34-120 Hz). We selected the same frequency
of 34Hz as the lower limit of the range to meet the reasonable detectable amplitude
frequency requirement for alpha phases.
Statistical analysis for PAC
This study used PAC values computed from the time-coursed sources of V1 and FG
to do the statistical analysis. A non-parametric 2×2 ANOVA with permutations was
performed for each region with two factors: group (controls vs. ASD patients) and
condition (face vs. no-face). This analysis aimed to investigate the main effects and
interactions of the factors. The statistical results were corrected for the
multiple-comparison problem in phase frequency and amplitude frequency using the
Holm statistical analysis with 5000 permutations. An alpha level of 0.05 was set.
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Directed connectivity for V1 and FG
To measure directed functional connectivity, we employed a bivariate Granger
causality method (Granger, 1969; Dhamala et al., 2008) based on the time-coursed V1
and FG sources (0–1.0 s after stimulus onset). The values were averaged for V1 and
FG individually and then calculated for each pair of interests. These values were then
used to indicate the strength of connectivity from one region (V1 or FG) to the other
(FG or V1).
The Directed Asymmetry Index (DAI) has been used to measure the asymmetries
of directed connectivity (Bastos et al., 2015b). This DAI (equation. 1) is used to
determine whether the Granger causality influence is feedforward (DAI>0) or
feedback (DAI<0), as noted by Seymour et al. (2019). The DAI values were
compared statistically between different groups.
/g1830/g1827/g1835 /g3404
/g3008/g3004/g4666/g3023/g2869/g1372/g3007/g3008/g4667/g2879/g3008/g3004/g4666/g3007/g3008/g1372/g3023/g2869/g4667
/g3008/g3004/g4666/g3023/g2869/g1372/g3007/g3008/g4667/g2878/g3008/g3004/g4666/g3007/g3008/g1372/g3023/g2869/g4667 ( 1 )
Where /g1833/g1829 /g4666 /g18481 /g1372 /g1832/g1833 /g4667 means the granger causality value is calculated from V1 to FG
and /g1833/g1829/g4666/g1832/g1833 /g1372 /g18481/g4667 means the granger causality value is calculated from FG to V1.
Statistical analysis for connectivity
The regions of interest are the left V1 (V1 L), the right V1 (V1 R), the left FG (FG L),
and the right FG (FG R). A connectivity map based on Granger causality among these
four regions was analyzed statistically using the non-parametric 2x2 ANOVA method
similar to the one mentioned above.
Behavioral correlations with PAC and connectivity
To investigate the relationship between alpha-gamma PAC and behavior, we
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computed correlations between each alpha-gamma PAC, reaction times, detection
rates, and the discrimination index (A') for both the ASD and control groups for the
face and no-face conditions separately. We obtained correlations for each
alpha-gamma PAC at different conditions with reaction times, detection rates, and the
discrimination index A'. We also computed correlations between connectivity and
behavior data. Significant correlations were found among regions (V1 L, V1 R, FG L,
and FG R) at different conditions with reaction times, detection rates, and the
discrimination index A'. Only significant correlations that met an alpha level of 0.05
with Bonferroni correction (Curtin and Schulz, 1998) were considered.
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Figure Legends
Figure 1 Visual Perception: (A) Paradigm and (B) interested alpha and gamma
powers.
Figure 2 The time-coursed sources averaged over ROIs from one subject. (A)
Fusiform gyrus area; (B) the time-coursed sources averaged over Fusiform Gyrus
areas on the left and the right hemispheres; (C) primary visual area 1 (V1); (D) the
time-coursed sources averaged over the V1s on the left and the right hemisphere.
Figure 3 ANOVA analysis for alpha-gamma PAC: (A) Main effect of Group in V1;
(B) Main effect of condition in V1; (C) the interaction between the two factors
(control vs. ASD and face vs. no-face); and (D) Main effect of condition in FG.
For the main effect of groups in (A) and (D), the blue colors indicate the increased
PAC in the ASD group. For the main effect of condition in (B) the blue color
indicates the higher alpha-gamma PAC to no-face stimuli. In C, the red color
indicates higher alpha-gamma PAC in the face condition for controls vs. autistic
patients. The statistical analysis is multiple-comparison corrected and the alpha
level is set to 0.05.
Figure 4 Grange causality values for V1-FG directed connectivity were computed
based on the groups and the conditions. Both the local connectivity and the global
connectivity were estimated.
Figure 5 ANOVA analysis was implemented based on the grange causality values in
Figure 4: (A) the Main effect of the group, (B) the Main effect of the condition,
and (C) the interaction between the two factors (control vs. ASD and face vs.
no-face). For the main effect of the group, the red color indicates the stronger
connectivity in controls. For the main effect of the condition, the red colors
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indicate the stronger connectivity to face stimuli. For the interaction between the
two factors, the red color suggests higher connectivity in the face cond ition for
control vs. autistic patients. The statistical analysis is multiple-comparison
corrected and the alpha level is set to 0.05.
Figure 6 The directed asymmetry index (DAI) was computed for each group and each
condition individually at the left hemisphere (A) and the right hemisphere (B).
Figure 7 Correlations between behavior and DAI. For the control group, the
correlation between DAI and the detection rate was negative at the face condition
(A). For the ASD group, the correlation between DAI and the detection rate was
positive at the face condition (B).
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