Abstract
Capulus danieli, a distinct member of Capulidae, with a limpet-shaped shell, exhibits
a unique ecological behaviour by attaching and drilling onto the shells of scallops,
distinguishing itself from other members of the gastropod class, offering a compelling
case for evolutionary and ecological study. This study initially obtained the complete
mitochondrial genome of C. danieli through second-generation sequencing. In
addition, 25 species closely related to C. danieli were selected to establish
phylogenetic analysis using Maximum Likelihood (ML) and Bayesian Inference (BI)
methods. Furthermore, a divergence time tree of Capulidae was constructed based on
the analysis of the 16S rRNA gene sequence of 11 Capulidae species.
The results showed that the mitochondrial genome of C. danieli is similar to most
known neogastropods, confirming the first record of this species in China. The
phylogenetic analysis also revealed a close evolutionary relationship between C.
danieli (Family Capulidae) and Ficus subintermedia, Ficus variegata (Family Ficidae)
within the Order Littorinimorpha. The divergence time estimation suggested that C.
danieli diverged approximately 52.29 million years ago. The genus Capulus of
mollusks exhibits morphological plasticity, adapting their form to better suit their
parasitic lifestyle. This adaptability may aid in their survival and reproduction on
various hosts. The adaptive changes in the shell morphology of Capulus species in
response to the morphology of their host shells can be considered an example of
co-evolution.
Keywords
mitochondrial genome; phylogeny; divergence time estimation
Introduction
Capulidae belongs to the Phylum Mollusca, Class Gastropoda, Subclass
Caenogastropoda, Order Littorinimorpha, is a widely distributed marine gastropod. It
comprises eighteen acknowledged genera, the majority of which exhibit a coiled form
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
morphology. However, a considerable subset of Capulidae species also exhibit a
limpet-like form, demonstrating the family's morphological diversity (Fassio et al.
2020a). Within the uncoiled faction, the genus Capulus (established by Montfort in
1810) stands out as the most extensively distributed and comprises a minimum of
twenty extant species according to contemporary taxonomical consensus (Worms
2024). Capulidae represents an exemplary case of extreme limpetization among
gastropods (Simone 2018). Capulid shell plasticity is associated with a broad range of
feeding ecology. Many coiled species within the Capulidae are obligate suspension
feeders, capitalizing on water currents generated by their hosts to facilitate feeding
mechanisms (Iyengar 2007). Capulus danieli is a relatively large species within the
genus, with diameters ranging from 20 to 30 mm (Orr 1962). Characterized by its low,
limpet-shaped form, this species possesses a unique shell structure with a protoconch
composed of smooth, planispiral whorls, followed by a cap-shaped teleoconch
featuring a large, horseshoe-shaped muscle scar (Ponder and Lindberg 1997). The
species of the genus Capulus show significant variations in morphology, and this
variation is related to the morphology of the host shells they parasitize (Beu et al.
2004).
Ecologically, C. danieli shows intriguing behaviours, notably its attachment and
drilling onto the shells of scallops, reflecting a xenomorphic sculpture mirroring the
form of its host (Orr 1962). Despite its ecological significance, research on C. danieli
remains limited.
Due to the rarity of most capulid species and the infrequent collection of live
specimens, only a few studies have attempted to explore the phylogenetic relationship
of Capulidae. The first phylogeny of capulids was produced by Fassio et al. (2015),
who also explored the larval ecology of some Antarctic species. More recently, Fassio
et al. (2020b) proposed a new phylogenetic hypothesis using a taxonomic framework
based on six genera to address the Indo-West Pacific diversity of Hyalorisia.
Additionally, Fassio et al. (2020a) conducted an ancestral state reconstruction analysis
on a time-calibrated phylogenetic tree within the family Capulidae, suggesting that
capulids evolved from a coiled suspension feeder lineage, with a significant
evolutionary shift to kleptoparasitism occurring in the family ancestor.
Here, we present the first characterisation of the mitochondrial genome of C.
danieli to elucidate its gene function, phylogenetic relationships with limpet-like
gastropods, and divergence time estimation. This study advances our understanding of
C. danieli's evolutionary history and ecological adaptations.
Materials and methods
Sample collection and identification
Four specimens of C. danieli were collected in December 2022 from Yangjiang,
Guangdong Province, China (21°85′N; 111°95′E). The individual capture was not
feasible, the specimens were all found on the surface of shells of the economically
significant scallop Amusium pleuronectes (Figure 1). Capulus specimens were
relatively rare, with approximately one found in every 30 scallops. Fresh tissue was
stripped from the shell, digestive glands were removed, and foot muscle tissue was
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
preserved in anhydrous ethanol for subsequent experiments.
The species identification was based on the classification and comparison of the
morphological characteristics of the specimens by Fassio et al. (2020a) and Orr
(1962), according to its ovate, reddish-brown shell, irregular concentric growth lines
on the surface and degradation, curls backward apex. By blasting in GenBank through
the 16S in the mitochondrial gene of the species, and the percent identity with C.
danieli being 99.43%, it was determined that the species was C. danieli. Currently,
there are no records of this species in China; previous records mainly documented
Capulus dilatatus A. Adams, 1860, Capulus kawamurai Habe, 1992, and Capulus
otohimeae Habe, 1946 (Liu 2008;Zhang 2008). These records appear morphologically
similar to the species described in this paper, but due to the lack of actual specimens
and molecular information, it is impossible to determine whether they are synonyms.
Figure 1. C. danieli and its host A. pleuronectes.
A, The back view of C. danieli. B, The ventral view of C. danieli. C, The lateral view of C. danieli.
D, C. danieli attached to A. pleuronectes. E, The shell of A. pleuronectes with a drill hole from C.
danieli. (Scales 10mm).
DNA extraction, library preparation and next generation sequence
One specimen had its foot muscle extracted (2g) for DNA extraction. The genomic
DNA (gDNA) was extracted using the Qiagen DNeasy® Blood & Tissue kit (Qiagen,
Hilden, Alemanha) and pre-grinding in liquid nitrogen. The concentration of the
extracted DNA was tested using a Qubit dsDNA HS assay kit from Sangon (Shanghai,
China), and its integrity was confirmed using 1% agarose gel electrophoresis.
Subsequently, library preparation and next-generation sequencing were performed by
Sangon Biotech (Shanghai) Co., Ltd. For the library preparation, 500 ng of the
quantified DNA was randomly fragmented using Covaris (Woburn, USA). The Hieff
NGS® MaxUp II DNA Library Prep Kit for Illumina from YEASEN (Shanghai,
China) was utilized for the following steps. The process included repairing the ends
and adding a 3ʹ end A tail, followed by the ligation of adaptors using an enhancer and
Fast T4 DNA ligase. Index primers were added through PCR, and the resulting
amplified product (approximately 400 bp) was selected using DNA selection beads.
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
The concentration and size of the library were confirmed using the Qubit 4.0 (Thermo,
Waltham, USA) and 2% agarose gel electrophoresis, respectively, and the libraries
were pooled and loaded onto a Novaseq 6000 from Illumina (San Diego, USA) or
DNBseq-T7 from BGI (Shenzhen, China) sequencer using a 2 × 150 bp paired-end
sequence kit, following the manufacturer's instructions (Dierckxsens et al. 2017).
Sequence assembly and annotation of the mitochondrial genome
Raw sequencing data of at least 6 GB was used for subsequent analyses. All of the
raw reads were trimmed by Fastp (0.36) (Chen et al. 2018). SPAdes software (version
3.15) (Bankevich et al. 2012) was used to assemble the raw sequence reads into
contigs. The candidate mitochondrial contig with lapped bases between the start and
end of the contig was selected as a circular genome from raw contigs. Finally, the
lapped bases were dropped from the candidate contig to generate a complete
mitochondrial genome. NCBI-blast tblastn and Hmmer software search for
protein-coding genes from scaffolds against the protein database and MiTFi (1.1) was
used to annotate tRNA and rRNA genes.
Systematic analysis
A total of 25 species were curated for the construction of a phylogenetic tree based on
the complete mitochondrial genome sequences. The genetic data for 23 species
encompassing families Haliotidae, Neritidae, Patellidae, Nacellidae, Calyptraeidae,
Muricidae, Ficidae, Naticidae, Strombidae, Struthiolariids, and Xenophoridae were
obtained from the NCBI database (refer to Table 1). The selection of certain species
was predicated on their morphological resemblance to C. danieli (Vermeij 2017), it
contains all the limpet-like families of gastropods mentioned in Vermeij's 2017 article
with mitochondrial genomes. Further selections were made based on their inferred
phylogenetic proximity to C. danieli as delineated by the comparative alignment of
their mitochondrial genomes accessible via NCBI.
Additionally, two bivalve species, Chlamys farreri and Mizuhopecten yessoensis,
were incorporated as outgroup, with GenBank accession numbers EF473269.1 and
FJ595959.1 respectively. Prior to tree construction, PhyloSuite v1.2.3 (Zhang et al.
2020; Xiang et al. 2023) was utilised to extract the protein-coding genes (PCGs) from
each sequence, followed by multiple sequence alignment using MAFFT (Abascal et al.
2010; Katoh and Standley 2013). The alignment results of the protein-coding gene
sequences were optimised using MACSE (Ranwez et al. 2018), and Gblocks
(Talavera and Castresana 2007) were employed for sequence pruning. The isolated
PCGs were then concatenated to form a unified dataset. ModelFinder (Shapiro et al.
2006; Kalyaanamoorthy et al. 2017) was employed to segregate the data into
appropriate partitions and to identify the most suitable evolutionary model. The
phylogenetic tree was constructed using both the Maximum Likelihood (ML) method
in IQ-TREE v2.2.0 (Nguyen et al. 2015) and Bayesian Inference (BI) in MrBayes
v3.2.7a (Ronquist et al. 2012). To evaluate the robustness of the branches, 5000
bootstrap replicates were performed for the highest scoring ML tree. In the Bayesian
analysis, Markov Chain Monte Carlo (MCMC) simulations were initiated for
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
1,000,000 generations, with data collection occurring every 1000 generations. The
initial 25% of the MCMC sampled data was excluded as burn-in to ensure the
accuracy of the posterior estimates.
Table 1. List of the mitochondrial genome of 25 species analyzed in this study and their
GenBank accession numbers.
Subclass Family Species Length (bp) GenBank
accession
Vetigastropoda Haliotidae Haliotis iris 17131 KU310895.1
Haliotis rubra 16907 AY588938.1
Neritimorpha Neritidae Clithon sowerbianum 15919 MT230542.1
Theodoxus fluviatilis 15667 MT628587.1
Patellogastropoda Patellidae Patella ferruginea 14400 MH916654.1
Patella vulgata 14808 MH916653.1
Nacellidae Cellana radiata 16194 MH916651.1
Cellana toreuma 16268 ON018805.1
Nacella clypeater 16742 KT990124.1
Nacella magellanica 16663 KT990125.1
Caenogastropoda Calyptraeidae Desmaulus extinctorium 16608 OQ511529.1
Muricidae Concholepas concholepas 15495 JQ446041.1
Indothais sacellum 15237 NC063938.1
Capulidae Capulus danieli 15640 NC084349.1
Ficidae Ficus subintermedia 16255 OR522697.1
Ficus variegata 15736 NC056153.1
Naticidae Neverita didyma 15629 NC046594.1
Notocochlis qualtieriana 15176 NC046705.1
Strombidae Canarium labiatum 15843 NC084213.1
Laevistrombus canarium 15626 NC053786.1
Struthiolariidae Struthiolaria papulosa 15475 NC059921.1
Xenophoridae Onustus exutus 16043 MK327366.1
Xenophora japonica 15684 MW244823.1
Autobranchia
(Outgroup)
Pectinidae Mizuhopecten yessoensis 20964 FJ595959.1
Chlamys farreri 20889 EF473269.1
Estimation of differentiation time of Capulidae
We employed the 16S rRNA gene sequences of 11 Capulidae species (Table 2) to
estimate the divergence time within the Capulidae family, utilizing the topological
structure of the Bayesian phylogenetic tree as a reference framework. The analysis
was conducted using BEAST v2.7.6 software (Drummond et al. 2012), employing a
relaxed clock model. The Yule process was selected to model the prior branch
evolution rate of the tree.
To incorporate fossil evidence, we referenced the oldest species confidently
assignable to the genus Capulus, specifically Capulus onyxoides (Cossmann, 1879†),
which dates back to the Ypresian period (Lower Eocene, 56–47.8 Ma). Similarly, we
referenced Capulus (Hyalorisia) nettlesi (Robinson, 1983†) from the Upper Eocene
period (41.2–33.9 Ma) for the genus Hyalorisia (Fassio et al. 2020a). Markov chain
Monte Carlo (MCMC) analysis was executed with 100 million generations with
samples taken every 1000 generations. The TreeAnnotator v1.8.4 component of the
BEAST software package was used to discard the first 25% of aging samples as
burn-in. Convergence of the chain was confirmed using Tracer v.1.7 (Rambaut et al.
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
2018), ensuring effective sample size (ESS) values greater than 200. The resulting
divergence time estimates were validated against Timetree fossil records, and the
Results
were reported to verify the accuracy. We used TVBOT as a graphic
beautification tool (https://www.chiplot.online/tvbot.html) (Peng et al. 2022).
Table 2. List of the 16S rRNA genes of Capulidae species analyzed in this study and
their GenBank accession numbers.
Results
Characteristics of C. danieli's mitochondrial genome
The complete mitochondrial genome of C. danieli spanned 15,640 bp (GenBank
accession number: NC084349.1) and comprised a typical circular, closed,
double-stranded molecule with a control region. The coding region contains a total of
37 coding genes, including 13 protein-coding genes, 22 tRNA, and 2 rRNA. The
non-coding region contains a total of 23 gene intervals, with a combined length of 829
bp. The contents of four bases were A: 31.57%, T: 39.55%, G: 14.92%, C: 13.96%.
The A + T content was 71.12% and the G + C content was 28.88% (Figure 2).
Species name Length (bp) GenBank
accession
Capulus danieli 524 MT525840.1
Capulus ungaricus 525 MT525803.1
Hyalorisia tosaensis 405 MT525849.1
Hyalorisia galea 526 MT525835.1
Cryocapulus subcompressus 760 KR364850.1
Torellia exilis 529 MT525847.1
Torellia smithi 714 KR364868.1
Torellia insignis 769 KR364865.1
Torellia mirabilis 745 KR364856.1
Trichamathina violaceus 529 MT525806.1
Trichamathina bicarinata 529 MT525846.1
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
Figure 2. Gene map of the complete mitogenomes for C. danieli. The bar plots
(turquoise) in the inner circle represent the depth of base sequencing. The outermost
gene element contains forward transcription genes within its inner circle, while the
outer circle contains reverse transcription genes.
Phylogenetic relationship
The phylogenetic analysis of the gastropod species was conducted utilizing two
prominent methods: The Bayesian Inference (BI) method and Maximum Likelihood
(ML). The approaches were used to construct a phylogenetic tree of 13 PCGs
sequences across 25 species, with two species of C. farreri and M. yessoensis as
outgroup (Figure 3). The phylogenetic tree contained 13 families, each forming a
monophyletic group. This pattern is consistent with prior research, which has
established the monophyletic nature of these groups (Zhong et al. 2020; Qi et al. 2024;
Ma et al. 2024). A comprehensive examination of the tree revealed a specific
evolutionary hierarchy: ((Neritimorpha + Patellogastropoda) + Vetigastropoda +
Caenogastropoda). This structure underscores the basal position of the Haliotidae
family within the Vetigastropoda as the outermost branch of the tree. The remaining
gastropods were primarily divided into two major clades: (Neritimorpha +
Patellogastropoda) and Caenogastropoda. C. danieli exhibited the closest genetic
affinity with Ficus, a member of the Littorinimorpha. C. danieli had a distant
phylogenetic relationship with the limpet-like shell species Neritimorpha,
Patellogastropoda, and Caenogastropoda, indicating that it does not belong to the
same primary branch. The recurrent appearance of limpet-like shells in multiple
branches of the phylogenetic tree suggests multiple independent evolutionary events
within the Gastropoda. Statistically, limpet-like shells have been documented in at
least 54 families of gastropods (Vermeij 2017).
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
Figure 3. The phylogenetic tree was constructed based on the Maximum Likelihood
(ML) and Bayesian Inference (BI) of 13 protein-coding genes. The numbers displayed
above branches were Bayesian posterior probabilities, and the numbers below
branches represent bootstrap support. The red triangle represents the species C.
danieli of this study.
Divergence time estimation
We reconstructed a divergence time tree of Capulidae based on the analysis of the 16S
to explore its evolutionary process (Figure 4). Through its evolution history, the
family Capulidae had undergone numerous transitions towards the development of
limpet-shaped shells. The divergence time tree indicated that the Capulidae family
originated in the Callovian stage (Middle Jurassic) period approximately 155.25
million years ago. This finding establishes a significant temporal benchmark for the
family's emergence.
The family's evolution to its first limpet-like shell was exemplified by the branch
representing Cryocapulus subcompressus, which occurred around 123.95 Mya (Early
Cretaceous). Subsequently, the second evolution transition to the limpet-like shell
took place approximately 82.65 million years ago (Late Cretaceous), leading to a
divergence between the limpet-shaped genus Trichamathina and the spiral genus
Torellia. A further divergence event occurred about 66.44 million years ago (Late
Cretaceous), distinguishing the genus Hyalorisia from the genus Capulus. The genus
Trichamathina, characterized by its limpet-like shell, is primarily defined by
symmetrical and enlarged body whorls, yet it retains certain features reminiscent of
the coiled tower shape, indicating a distinct evolutionary pathway. About 66.44
million years ago (Late Cretaceous), there was a divergence between Hyalorisia and
Capulus. Although there are differences in the taxonomic status of the two species,
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
they show similar and highly capped shell-like characteristics, which further
highlights the diversity and complexity of the evolution of the family. Finally, during
the Eocene (Paleogene), about 52.29 to 36.03 million years ago, the differentiation of
Capulidae reached its peak, and Capulidae gradually evolved a shell type similar to
that of limpets. This period marked an important stage in the evolution of the family
and provided valuable information about its evolution.
Figure 4. Estimating the divergence time of the family Capulidae based on 16S. Bars
indicate 95% highest posterior density intervals for node ages (Ma), and number at
node the median (Ma).
Discussion
The distribution of C. danieli
C. danieli was originally identified in New Caledonia in the South Pacific (Beu et al.
2004; Fassio et al. 2020a), and its distribution records also exist in Japan (Okutani et
al. 2017). This study presents the first report of C. danieli in China, specifically in the
vicinity of the South China Sea in Yangjiang City, Guangdong Province. C. danieli
(Crosse, 1858) is a species widely distributed in the Western Pacific, ranging from
central Japan (Okutani et al. 2017), the Philippines to southern Australia (Garrard
1961), including northern New Zealand (Beu et al. 2004). In Australia, there are fossil
records of C. danieli, discovered by Tate (1893) in the Miocene and Pliocene strata of
Victoria and South Australia. The fossil records in New Zealand mainly come from
the Landguard Sand and Te Piki Member in the Wanganui region, and it expanded
from Australia to New Zealand during the Pleistocene period (Beu et al. 2004). Its
dispersal methods may be two fold: one is through the dispersal of its larvae, and the
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
other is due to its host scallops, which are also found in the same distribution where
this species is detected. C. danieli might have a pelagic larval stage, and these larvae
can drift in the ocean and settle in suitable environments (Beu et al. 2004).The
findings from this study have confirmed Beu's hypothesis..this diffusion mechanism
enables the species to cross the ocean in the absence of physical barriers. The
presence of C. danieli found in the Philippines, the South China Sea of China, and
Japan may be influenced by the Japan Current. The distribution of scallops to which it
attaches is also found in the Philippines, the South China Sea of China, and Japan.
The possibility of its spread through the migration of scallops cannot be excluded.
More evidence also requires an increase in fossil records.
Characteristics of the mitogenomes
In this study, the whole genome sequence of C. danieli was obtained by
high-throughput sequencing technology, with an assembled length of 15600 bp. The
length of the whole genome sequence of other gastropods in this study was
14400–17131 bp (Table 1). In most cases, the mitochondrial genome of gastropods is
usually between 14,000 and 18,000 bp (Chen et al. 2023; Kim et al. 2023; Qu et al.
2024). The length of the mitochondrial genome of C. danieli was within the normal
range of gastropods. The mitochondrial genome AT content of C. danieli was 71.12%.
Among the gastropods in this study, the lowest AT content was Haliotis rubra
(59.1%), and the highest was Ficus subintermedia (74.2%). The AT content of C.
danieli was higher than that of Vetigastropoda (59.1%–59.8%) and similar to that of
most Caenogastropoda (67.8%–74.2%). Generally, the AT content of gastropods is
about 60%–75% (Chen et al. 2023; Kim et al. 2023). The high content of AT makes
them more susceptible to base mutations. Due to its susceptibility to replication errors,
which can lead to an increased rate of polymorphism under environmental stress
(Broughton and Reneau 2006).
Phylogenetic implications
Mitochondrial DNA sequences are increasingly being employed in phylogenetic
studies, owing to their significance in elucidating evolutionary relationships among
organisms (Dhorne-Pollet et al. 2020). In this study, a phylogenetic tree was
constructed based on PCGs of 25 species, specifically focusing on gastropod mollusks
that exhibit the closest genetic and morphological affinities (limpet-like shell) with C.
danieli. The purpose is to understand the taxonomic status of C. danieli and its
evolutionary relationship with limpet-like gastropods. Results showed : C. danieli was
not clustered with other limpet-like species but was grouped with F. subintermedia
and F. variegata (Ficidae) to form one subclade. According to the available records,
Ficidae does not include any limpet-like species. Additionally, among the sister
branches of (C. danieli + F. subintermedia and F. variegata), the families Naticidae,
Strombidae, Struthiolariidae, and Xenophoridae also do not have limpet-like species.
In contrast to other aforementioned families, Capulidae is the only family that has
evolved shell-shaped mollusks.
Throughout the Phanerozoic eon, which spans from the Cambrian to the
Neogene periods, gastropods have experienced a multitude of morphological
transformations, with the evolution of limpet-like shells being particularly prevalent
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
in marine environments (Vermeij 2017). The Capulidae family, known for its highly
limpet-shaped shells, has seen numerous transitions to this form (Fassio et al. 2020a).
Although C. danieli shares morphological similarities with these limpet-like
gastropods, it was found to be only distantly related. This instance of convergent
evolution is primarily attributed to the influence of specific environmental pressures
(Vermeij 2001). Becoming a limpet-like shell simplified shell structure of C. danieli,
which is less suited to intense interspecific competition and predation. According to
the ecological niche and lifestyle of C. danieli, we can roughly summarize the
benefits of its transformation into a limpet-like shell: The limpet-like shell form
minimizes water flow resistance, maximizes the attachment surface area, and reduces
the potential for dislodgement (Vermeij 2017), which is particularly adapted to the
obligate sedentary parasitic lifestyle of C. danieli on the surface of scallops.
It is known from the phylogenetic tree of the Conidae family constructed based
on 16S that the recurrent emergence of the limpet-like shell within the family
Capulidae, as exemplified by the Cryocapulus, Capulus + Hyalorisia, and
Trichamathina lineages. The process of becoming a limpet-like shell appears
intermittently and repeatedly in the family Capulidae, due to the complex
evolutionary pressures that have shaped the diversity of shell morphologies within
this family.
Molecular clock analysis estimated the Capulidae family originated in the
Middle Jurassic period, specifically during the Callovian stage, approximately 155.25
million years ago. However, Fassio et al. proposed a more recent origin, dating
Capulidae to 112.87 million years ago (Fassio et al. 2020a). This divergence predates
the oldest known Capulidae fossil record by several million years (Saul and Squires
2008), indicating a gap between molecular and paleontological evidence that
necessitates further investigation to elucidate the early evolutionary narrative of
Capulidae.
The divergence time for C. danieli is dated to around 52.29 million years ago
during the Palaeocene-Eocene transition, a period marked by global warming and
elevated sea surface temperatures (Tripati et al. 2001). The paleoenvironmental
conditions of this era, characterized by transient eutrophication and ocean
acidification (Scheibner et al. 2005; Alegret and Ortiz 2007; Scheibner and Speijer
2008), likely exerted selective pressures favouring a parasitic lifestyle in C. danieli.
Such rapid climatic shifts can precipitate significant alterations in faunal composition
across various habitats, presenting novel evolutionary prospects. Eutrophication can
lead to alterations in the composition of primary producers in marine ecosystems,
such as algal blooms. As the availability of suspended particulate matter diminishes
and humus concentrations increase, gastropods may shift from filter feeding to
alternative feeding strategies (Vermeij 2001). Poulin and Randhawa have discussed
the evolution of parasitic behavior as a response to environmental pressures. When
the main food sources become scarce or the energetic cost of feeding escalates,
organisms may adopt parasitic lifestyles to persist (Poulin and Randhawa 2015). This
ecological transition may have facilitated the adoption of a limpet-like shell form in C.
danieli, enhancing nutrient access through kleptoparasitism of bivalves.
Author-formatted, not peer-reviewed document posted on 06/11/2024. DOI: https://doi.org/10.3897/arphapreprints.e141013
The morphological changes
The species of the genus Capulus show significant variations in morphology, and this
variation is related to the morphology of the host shells they parasitize. For instance,
their shell morphology might change according to the shape of the host, forming the
so-called xenomorphic sculpture (Orr 1962). Some samples of C. danieli attached to
host shells with distinct radiating ribs develop corresponding shell edge depressions
(Beu et al. 2004). In this study, the samples were attached to the smooth surface of
scallop shells and did not form xenomorphic sculpture. However, the scallops to
which they were attached showed concentric growth line patterns, and similar patterns
were also formed on the C. danieli that parasitized on their surface. This proves that
the species of the Capulus genus typically have morphological characteristics adapted
to parasitic life.
Conclusions
In this study, we have documented the mitochondrial genome of C. danieli,
representing the inaugural comprehensive mitochondrial genome sequence recorded
within the family Capulidae. We analysed the characteristics of the mitochondrial
sequence of C. danieli. Additionally, we conducted a phylogenetic analysis to infer
the evolutionary nexus between C. danieli and limpet-like gastropods. Molecular
clock estimates were utilised to approximate the divergence timeframe of the
Capulidae lineage, concurrently delineating the evolutionary trajectory leading to the
adoption of a limpet-like shell morphology.Additionally, we have summarized the
relationship between its morphological plasticity and its host, suggesting that although
the species exhibits a variety of external morphologies, the primary reason is
co-evolution with the host's form. This species was discovered for the first time in
China , and our study has summarized its distribution range, speculating that the
influence of the Japan Current has shaped its current distribution area.
The collective findings of this study substantially augment our comprehension of the
evolutionary narrative and genetic underpinnings of C. danieli, casting new light on
its distinctive ecological adaptations within the marine ecosystem.
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