Cross-cohort integration identifies a heterogeneous endometriosis-associated transcriptome: locked analysis code and result tables

This publication serves as a software resource accompanying a manuscript submitted to Genome Medicine, providing locked analysis code and result tables for a cross-cohort integration study. The package includes a time-stamped analysis charter, versioned scripts, a dataset manifest, frozen contrast definitions, and figure-generation code to ensure reproducibility of the transcriptomic findings. These materials support the identification of a heterogeneous endometriosis-associated transcriptome through integrated multi-cohort data analysis. This paper is centrally about endometriosis — specifically the computational identification of transcriptional heterogeneity within the disease state.

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