Introduction
31
Plastic changes in the brain are primarily limited to early postnatal periods and have been mainly 32
studied within the same modality. Crossmodal plasticity refers to neural plasticity that allows 33
adaptation to the loss of a sensory modality. Sensory modality loss can occur during pathological 34
states of the peripheral sensory systems, such as loss of hair cells in the cochlea, resulting in 35
deafness, or damage of the eyes, resulting in blindness (1-4). Crossmodal plasticity is thought to 36
underlie the enhanced auditory abilities of the early- (1, 5-8) and late-blind (7, 9). Several circuit-37
level plasticity changes have been observed in adult mice with temporary visual deprivation (dark 38
exposure, DE). DE in adult mice has profound effects on the primary auditory cortex, such as 39
strengthening of thalamocortical synapses (10), refinement of excitatory and inhibitory 40
intracortical circuits (11-13), and selective reduction of thalamic -reticular nucleus -mediated 41
inhibition of the auditory thalamus (14). These circuit changes correlate with changes in the 42
sound-evoked responses, such as reduced thresholds, increased gain, increased frequency 43
selectivity (10), and decorrelation of spatiotemporal population responses (15), which together 44
should lead to increased coding fidelity. We thus investigated if DE leads to improved auditory 45
ability. 46
To understand the effects of DE on auditory processing, we placed 48 C57BL/6J (C57) 47
and 48 CBA/CaJ (CBA) mice in home cages fitted with an automated auditory behavior system 48
(“ToneBox”) that allowed continuous long-term observation (Fig. 1A) (16, 17). To test the effects 49
of DE, we take advantage of both the C57BL/6J mouse strain that develops progressive hearing 50
loss with age as well as CBA mice that retain normal hearing (18-24). Using the C57BL/6J strain 51
enables us to test the effects of DE on hearing frequency bands with normal (low and mid 52
frequencies) and reduced complement of hair cells (high-frequencies). 53
Once placed in the ToneBox, mice receive d a water reward for detecting tones from the 54
ToneBox speaker. After the tone was presented, mice had a reward window to lick the ToneBox 55
water spout. Licking was detected with a capacitive sensor. By placing multiple animals in the 56
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cage, we avoided the effects of social isolation. Mice live d and performed the task in the cage 57
with no interaction with humans for the duration of the experiment, except for biweekly bedding 58
change. In the ToneBox, we continuously presented 88 different combinations of different sound 59
frequencies (11 total tones) and sound amplitudes (8 total amplitudes), which enabled us to 60
construct long-term “performance audiograms.” Figure 1B shows an example of a typical week -61
long timeline of hit activity showing, as expected, that mice were active in the dark cycle. 62
63
Results
64
DE reduces the decline in performance in the high-frequency band of C57BL/6J mice. 65
Mice were 63 days old at the start of the experiment. We divided the mice of both 66
C57BL/6J and CBA lines into two groups respectively: Control (CT) and DE (8 ToneBoxes, 24 67
mice per group) (Fig. 1C). Mice were placed into the ToneBoxes for an initial 14-day habituation 68
and shaping phase to stabilize their performance (Fig. 1D). We divided the following 70-day-long 69
experiment timeline into five periods. Period I was 7 day-long while Periods II, III, IV, and V were 70
14 day -long. Periods I, III, and V were under a typical 12 -hour light/dark cycle for both 71
experimental groups. In periods II and IV, the DE group was hermetically sealed from the room 72
light, while the CT group remained in the normal Light/Dark cycle. Normal circadian rhythm was 73
present throughout the experiment, including DE periods. Example recordings of hit rates from 74
the complete 77 -day-long timeline are shown for all four groups: the C57BL/6J CT, CBA CT, 75
C57BL/6J DE, and CBA DE groups (Fig. S1). 76
In CT C57BL/6J ToneBoxes, we noticed that the hourly hit rates show a decrease in 77
performance for the highest frequency band (40kHz) with increasing age (Fig. 1E). We performed 78
a spot test on day 70 of the 40kHz band against performance from all other frequency bands and 79
the difference was statistically significant (t-test, p = 0.0273). This decreased performance is 80
consistent with the development of presbycusis in these mice due to peripheral hearing loss (18-81
20). Based on ABR measurements (18-20), the onset of hearing loss in C57BL/6J mice in the 82
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high frequencies is approximately at the start of Period II (Postnatal day 84, P84), consistent with 83
the decreased performance we observed. In contrast, DE C57BL/6J ToneBoxes did not show 84
decreased performance at high frequencies and only showed a slight decline later in the 85
experimental timeline (Fig. 1F). This delay in decline will be described below in detail. At day 70 86
performance was similar between groups (t-test, p >> 0.05). Consistent with preserved peripheral 87
hearing in CBA mice, the 40kHz band did not show any decline with age, and groups performed 88
similarly at day 70 (t-test, p >> 0.05) (Fig. 1G and 1H). These observations suggest that the DE 89
periods in visually deprived animals reduced the decline of the processing of high -frequency 90
sounds in C57BL/6J mice. 91
92
DE increases tone detection performance in CBA and C57BL/6J mice. 93
To first identify how animal performance varied with frequency and amplitude and to 94
investigate whether DE affected the frequency and amplitude (FxA)-dependent hit rate, we 95
calculated the ratio of hit rates between the first vs. last period hit rates for each FxA bin. We first 96
plotted these heatmaps for C57BL/6J CT and DE groups (Fig. 2A). In the CT C57BL/6J group, 97
the hit rates decreased for the whole high -frequency band across sound amplitudes (Fig. 2A, 98
black arrows , 32 & 40kHz all SPL levels ). This decline in performance occurs in a similar 99
frequency band as presbycusis reported in C57BL/6J mice of this age (19). In contrast, such 100
decreased performance was not present in the C57BL/6J DE group. These results suggest that 101
DE attenuates the high-frequency-specific decline of detection performance in C57BL/6J mice. 102
We next investigated if there was an overall decreased performance in CT C57BL/6J mice 103
compared to DE mice. We calculated the total hit rates by merging all FxA bins in a given period, 104
which gave us a rough measure of change in overall tone detection performance, independent of 105
the tested stimulus (Fig. 2B, left). The changes in total hit rates in CT and DE C57BL/6J mice 106
were similar (CT: -0.53% ± 10.06% SEM, DE: + 2.91% ± 2.19% SEM, t-test, p = 0.7428). This 107
indicates that the overall performance of CT and DE mice was similar. Given that hit rates 108
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decreased for high frequencies in CT mice, this suggests that CT mice have relatively more hits 109
at lower frequencies. In contrast, in C57BL/6J DE mice high-frequency performance is preserved. 110
Together, these results suggest CT C57BL/6J mice show decreased hit rates for high 111
frequencies and an increased hit rate at lower frequencies while in DE C57BL/6J mice high-112
frequency performance is preserved. 113
We next analyzed the rate -of-change audiograms for the CBA CT and DE groups (Fig. 114
2C). In contrast to C57BL/6J mice CT CBA mice do not show decreased performance at high 115
frequencies. However, after DE we observed a widespread increase in hit rates (Fig. 2C). In the 116
CBA DE group hit rates increased by +9.00% ± 4.60% SEM while in the CBA CT group hit rates 117
decreased by -4.15% ± 6.49% (Fig. 2D, left ; t-test, p = 0.1205). While this difference is not 118
significant when summed over the whole frequency spectrum, qualitative inspection suggests that 119
the frequency band-specific performance in low and mid frequencies is enhanced by DE. 120
To examine band-specific performance for both C57BL/6J and CBA groups in detail we 121
analyzed the relationship between sound amplitude and hit rates in each frequency band. All trials 122
for the C57BL/6J CT group were first binned based on the sound amplitude parameter, and the 123
global correlation coefficient was calculated to be 0.9679 ± 0.0058 SEM, while the remaining three 124
groups followed a similar pattern. We thus used linear regression analysis to test whether the 125
slope (gain, abbr. SL ) of this relationship and/or baseline performance (inter cept, abbr. I C) is 126
changed after DE for C57BL/6J mice (Fig. 2E) and CBA mice (Fig. 2F). We used linear regression 127
model fitting to estimate the parameters of the linear fit for each frequency band and each group. 128
These linear fit estimates, together with 95% confidence intervals (CI) are shown as lines in 129
respective colors (fit) and 95% CI as shaded areas for plots in both subpanels. To determine if 130
these model estimates differ, the difference between the two groups was also fitted and tested for 131
the significance of parameters using a Multiple comparison correction ( Bejnamini & Hochberg 132
false discovery rate procedure (25) ). In Fig. 2E and 2F, we plot results for 8kHz and 40kHz bands, 133
and the statistics for the remaining frequency bands are given in Table S1 . First, this analysis 134
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confirms our visual observation of a major decline in the 40kHz band for the C57BL/6J group in 135
Fig. 2A where IC of CT and DE fits differed significantly ( F-test, p = 0.0027). Secondly, t he 136
frequency band-specific comparisons for CBA mice show differences of the intercept parameter 137
between the two groups for several low- and mid-frequency bands (4kHz: p = 0.0115; 6.3kHz: p 138
= 0.0014; 8kHz shown in Fig. 3B: p = 0.0079; 10kHz: p = 0.0005; 12.5kHz: p = 0.0107; 16kHz: p 139
= 0.0071; 25.0kHz: p = 0.0107; all other n.s. bands in Table S1). These rate -of-change 140
audiograms suggest that DE increased the total period hit rate across a broad frequency range in 141
CBA mice. 142
Together, these results suggest that DE increases performance on an auditory detection 143
task in both CBA and C57BL/6J mice. However, the details in which DE benefits audition seem 144
to differ between the two models: We hypothesize that in CBA mice with preserved hearing DE 145
facilitates the improvement of tone detections across frequency ranges, while in C57BL/6J DE 146
allows compensation to attenuate the age-dependent high-frequency hearing loss. 147
148
DE delays the effects of presbycusis in C57BL/6J mice by 12 days. 149
Our results suggest that C57BL/6J DE mice have higher behavioral performance at high 150
sound frequencies compared to CT at the end of our experimental time window. We next aimed 151
to identify the detailed behavioral time courses of these performance differences. We thus 152
analyzed the changes in the sound-frequency-dependent performance in the CT and DE groups 153
over time . For each ToneBox w e calculated the normalized hit rate (NHR) for each stimulus 154
(frequency & amplitude, F xA) condition in each hourly time bin for the entire 63 days of the 155
experiment. We normalized the stimulus-specific (FxA) hit rates to the total hit rate of a given 156
ToneBox for the same period across all conditions, meaning that the ToneBox with the normalized 157
hit rate of 1 for a given FxA band had the same hit rate as all the FxA bands combine d. This 158
normalization enabled us to investigate the distribution of hit preference and ability across the 159
sound spectrum. To minimize the effects of the 24-hour circadian rhythm, we averag ed these 160
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normalized hit rates for both the CT and DE groups with a moving 168-hour window. NHR activity 161
for C57BL/6J mice is shown for 4, 8, and 40kHz bands (Fig. 3A) and all remaining frequency 162
bands (Fig. S2A). In C57BL/6J CT cages, a drop of the NHR for the 40kHz band is present starting 163
around Day 40. In the C57BL/6J DE group, a much weaker drop is present at much older ages 164
(Fig. 3A, right). To better define this difference in the onsets of performance decline for CT and 165
DE groups, we defined the onset of decline as the first day when mean performance drops two 166
standard deviations below baseline performance from period I. Respective days are labeled with 167
colored arrows on the x-axis. This difference turned out to be 12 days (Day 45 vs 57). For the 168
4khz and 8kHz bands, no decreases in NHR were observed. Thus, DE delays the development 169
of the behavioral effects of high -frequency hearing loss in C57BL/6J mice. Notably, significant 170
differences in the 8kHz band were observed during period one around days 14-20. This was likely 171
due to group fluctuations in the shaping phase and these differences ceased after day 20. Lastly, 172
there was an increased preference for 4 and 6.3kHz bands in the CT group (Fig. S2) that occurred 173
at the same time as the decline of the 40kHz band of this group. As discussed above, these 174
increases were likely the compensation for lost ability in the 40kHz band. 175
In contrast to C57BL/6J mice, CBA mice do not suffer from any systemic peripheral 176
hearing loss at this age. Consistent with this, our analysis shows that CBA CT and DE mice do 177
not show differences in NHR in the 4, 8, and 40kHz bands (Fig. 3B) and all other frequencies (Fig. 178
S2B). These results confirm that frequency preferences in CBA mice did not change with DE as 179
was the case in the C57BL/6J group. Thus, the increase in absolute hit rates we observe in CBA 180
mice (Fig. 2C, D) is relatively widespread across the frequency spectrum. 181
Together, these results support our hypothesis that DE selectively increases the relative 182
performance of C57BL/6J mice at high frequencies while providing a more general benefit across 183
a wide range of frequency spectrum in CBA mice. 184
185
The effect of DE on performance is present across sound amplitudes. 186
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So far, we have lumped the performance at all sound amplitudes. We next evaluated if the 187
increased performance of C57BL/6J DE mice was present at all sound amplitudes. We thus 188
computed performance audiograms. We averaged cage NHRs for each period and plotted 189
smoothed heatmaps for Period I and V of the C57BL/6J CT and DE groups (Fig. 4A; see Fig. S3 190
for data from all periods). The interquartile range (IQR) contours for high-frequency bands differ 191
between C57BL/6J CT and C57BL/6J DE, and the CT group shows a shift of the IQR contours 192
toward lower frequencies. To evaluate this further, we plotted the ratios of C57BL/6J DE vs. CT 193
NHR (Fig. 4A bottom). The results from the C57BL/6J group indicate that DE effects are present 194
across high-frequency bands (32 and 40kHz). A similar analysis from the CBA group shows very 195
stable audiograms where the contours of the audiograms of the NHRs are nearly identical for 196
Periods I and V (Fig 4B; see Fig. S4 for data from all periods). This is also visible in the ratios of 197
CBA DE vs. CBA CT NHR (Fig. 4B bottom) where only minor differences are observed. We will 198
next quantify these differences in detail. 199
DE enhancement across performance levels suggested th at DE had effects across tone 200
amplitudes. We thus next investigated the DE enhancement effect in the amplitude domain by 201
plotting the NHRs of the FxA bands along the amplitude dimension for two frequency bands of 202
the C57BL/6J group from the period I and V: 8 and 40kHz, comparing the relationship between 203
sound amplitude and NHR with our linear regression model as previously done on raw hit rate 204
rations in Fig. 2E and F (Fig. 5A; see Fig. S5A for data from all periods and frequencies). 205
As can be seen from Fig. S5A and Table S1, the significance of the difference between 206
CT and DE groups for C57BL/6J mice is restricted to only 4 cases, 8kHz band in Period I that 207
likely originated in group-wide fluctuations of performance in late days of the training (F-test, 208
p=0.0465), 40kHz band for Period IV and V that signifies the rescuing effects of DE on 40kHz 209
band (F-test, P.IV: p = 0.0003; P.V: p < 0.0001, and, lastly, 4kHz band in Period V which is 210
compensatory effect of lost performance in the 40kHz band during the same period. For the last 211
case, the slope parameter was also significant, meaning that CT mice increased their 4kHz band 212
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performance with increased gain compared to the DE group (F-test, IC: p = 0.0082; SL: p = 213
0.0117). In contrast, the CBA group revealed no significant differences between the two models 214
(Fig. 5B and Fig. S5) for any frequency band or period (See Table S1). 215
Together, these analyses suggest that DE -induced auditory behavioral enhancement 216
seen in the C57BL/6J group leads to decreased thresholds across the high-frequency spectrum 217
after the onset of hearing loss. 218
219
The effect of DE emerges gradually. 220
We next investigated in detail the time course of the effects of DE. We thus generated NHR across 221
the experimental periods for all stimulus combinations for both the C57BL/6J CT, C57BL/6J DE, 222
CBA CT, and CBA DE groups and consequently plotted the ratio s of CT vs. DE for both the 223
C57BL/6J group (Fig. 6A) and CBA group (Fig. 6B). This analysis shows that the onset of DE 224
enhancement for the C57BL/6J group emerged around day 40 for the softest high -frequency 225
sounds and that improvements in the 32kHz bin emerged at around day 60. Given that day 40 226
was between our first and second DE periods, these data suggest that the first DE period could 227
already have a long-lasting effect on tone detection performance. 228
To test if a single period of DE could have a preventative effect, we trained an additional 229
cohort of C57BL/6J animals starting at P84 up to P140 (4 cages). Then, we performed two weeks 230
of DE timed to match Period IV in a postnatal reference. A single period of DE also resulted in 231
preventing the decreased performance in the 40kHz band (Fig. S6). Thus, a single period of DE 232
was able to reduce the effect of presbycusis. 233
234
Discussion
235
Our results show that temporary visual deprivation via DE in adults enhances the behavioral 236
performance of C57BL/6J mice in tone detection tasks in high-frequency bands where the effects 237
of presbycusis are usually evident. Additionally, we observed broad increases in the performance 238
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of low and mid frequencies in CBA mice that do not suffer from any systemic hearing loss at this 239
age. 240
Our automated design allowed us to gather hundreds of thousands of trials per cage . 241
Because of the minimalistic impact of the experiment design on mice’s daily routine, we eliminated 242
several confounds commonly appearing in rodent behavior studies, such as repeated handling of 243
animals (26). The hearing of both C57BL/6J and CBA mouse lines w as previously studied 244
extensively by several methods, most notably auditory brainstem response (ABRs) (19, 20, 22). 245
Threshold intensity shifts caused by presbycusis in C57BL/6J mice were observed as early as 246
P30 (27). While we did not measure the ABRs of individual mice, our experimental design 247
minimized variability. First, we used large cohorts of animals enabled by our automatic system. 248
Second, all animals were subject to the same developmental conditions until they were distributed 249
to two experimental groups at the same age (P63) before the start of the experiment. Third, 250
animals were group-housed in the ToneBox, thus each ToneBox recording represents a 251
composite of the performances of the three individual mice within a given cage. This within-cage 252
averaging further reduced the effect of the population variability on the hearing capabilities of 253
individual animals. 254
While we here use a tone -detection task, the circuit and functional changes of DE are 255
widespread and include the sharpening of tuning curves (10). We predict that DE affects a variety 256
of auditory tasks. Indeed, training on auditory temporal discrimination tasks can also improve 257
spectral tuning (28), suggesting that mechanisms engaged by training are affecting general sound 258
processing. Given that DE has an effect on thalamic (14), thalamocortical (10), and intracortical 259
(11-13) auditory circuits we expect that performance in a variety of auditory task s is improved. 260
Our data show an enhancement of the performance at high frequencies in C57BL/6J mice. This 261
enhancement is consistent with the increased number of neurons responsive to high frequencies 262
after DE in C57BL/6J mice (15). 263
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C57BL/6J mice have early onset of presbycusis – gradual age -related hearing loss, 264
evident in ABRs, otoacoustic emissions, and startle behavior for the high-frequency range starting 265
around 10 weeks of age (18-20). When mice reached an age corresponding to when high -266
frequency ABR hearing threshold shifts were evident in this strain (19), we observed a decline in 267
performance in our operand conditioning task in the high-frequency band. We noted that Control 268
mice show an increase in the relative amount of hits to low frequencies, indicating that they shift 269
their behavior to relatively “easier” stimuli to keep their water consumption constant. In contrast, 270
DE mice showed better performance at high frequencies. What mechanism could underlie this 271
improved performance? Hearing loss in C57BL/6J is caused by degeneration of the cochlea and 272
this degeneration starts at high frequencies (22-24). Such degeneration results in reduced 273
ascending sound-evoked activity and subsequently reduced activation of the auditory cortex for 274
high-frequency stimuli (29). Mechanistically, our behavioral data could be explained by the circuit 275
level plasticity we reported in previous studies. DE induces an increase in the strength of auditory 276
thalamocortical synapses (10), which can counteract the reduced afferent drive which leads to 277
enhanced sensitivity and increased responsiveness to sound stimuli in the thalamocortical 278
recipient layers of the auditory cortex (10). Consistent with the increase in thalamocortical 279
synaptic gain, we observed that DE leads to a steep increase in firing rates with changes in sound 280
amplitudes (10). Intracortical circuits and thalamic circuits can alter gain and adult DE has been 281
shown to affect both. After DE, ascending and recurrent intracortical circuits change synaptic 282
strength (11-13), and refine their connections, leading to a more efficient information transmission 283
(12). In addition to changes on the cortical and thalamocortical level, DE reduces inhibition from 284
the thalamic reticular nucleus to the auditory thalamus, enhancing the ascending transmission of 285
sound information through the thalamus (14). DE could also have effects on spectral contrast 286
tuning sensitivity (30). As previously shown, DE induces decorrelation of the sound -evoked 287
population activity in A1 which can lead to increased encoding fidelity of represented stimuli in 288
the cortex (15, 31). Together, all these circuit changes, both at the thalamic and cortical levels, 289
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enhance the transmission of the weakened high-frequency ascending signals to the auditory 290
cortex and lead to an increased representation of high-frequency tones in the auditory cortex after 291
DE (15). This potentiation of the feedforward circuit and refinement of the intracortical circuit could 292
allow better detection and sharper tuning needed to allow the processing of reduced auditory 293
signals arising from age -related peripheral hearing loss . We reason that these extensive circuit 294
changes compensate for decreased ascending drive and lead to the observed reduced behavioral 295
performance declines after DE. 296
Studies investigating early and life-long visual deprivations have shown various functional 297
and circuit changes that can give rise to improved auditory performance (32-34). We find that DE 298
can also induce such changes in adult animals. The changes we here see with DE improve 299
auditory behavior in a model of presbycusis is consistent with the idea that the behavioral deficits 300
in presbycusis are not solely due to loss of inner hair cells in the cochlea but also due to changes 301
in the brain. Indeed, the aging auditory cortex in CBA mice that do not suffer from peripheral 302
hearing loss also shows altered sound -evoked activity, such as increased correlations and 303
reduced ability to control activity correlations (35, 36). Our observation of increased hit rates in 304
DE CBA mice across low- and mid-frequencies is consistent with these findings. In conclusion, 305
this study suggests that the changes in central auditory processing lead to the increased ability 306
of animals to perform auditory tasks after DE. Furthermore, our data collectively suggest that DE 307
could be a simple method to reduce some of the effects of central aging and enhance the efficacy 308
of auditory performance with cochlear implants. 309
310
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311
312
Figure 1: DE reduces loss of detection performance for high-frequency tones. 313
(A) Automated home-cage training system with ToneBox. Tones are randomly presented from 4-314
40kHz and 30-65dB amplitude. Three animals were placed in each training cage, either C57BL/6J 315
or CBA mice. These groups are labeled with a crossed-out ear pictogram for the C57BL/6J group 316
and a non-crossed-out ear pictogram to label the CBA group. This notation is used for all figures. 317
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(B) Example performance during one week. Gray bars indicate the hit rate within each hourly time 318
bin. (C) 8 ToneBoxes under control 12h/12h light/dark conditions or during DE. (D) Experimental 319
timeline. DE cohort receives two 2-week DE periods (II & IV). Animals begin the Habituation and 320
Shaping phase at postnatal day 63 (P63). (E, F) Moving average hit rates for 40kHz or all other 321
tones for C57BL/6J CT and DE groups (N=8 for both). The black line in (E) on day 70 shows the 322
difference between the two observed means and this difference is statistically significant (t-test, 323
p < 0.05). Data averaged over all sound amplitude levels. (G, H) Same as in (E, F) but for CBA 324
CT and DE groups (N=8 for both). 325
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326
Figure 2: DE causes broad increases in performance in CBA and C57BL/6J mice. 327
(A) Rate-of-change audiograms for the CT (Left) and DE (Right) C57BL/6J groups. Black arrows 328
indicate the area of high-frequency band performance which significantly deteriorated throughout 329
the experiment. (B) Bar plot showing the average change of total period hit rates between periods 330
I and V. Red C57BL/6J CT, Blue DE C57BL/6J group. Black lines indicate SEM. ‘n.s’, ‘*’, indicate 331
statistical significance ( t-test, non-significant, p < 0.05 respectively). (C) Rate-of-change 332
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audiograms for the CT (Left) and DE (Right) CBA groups. (D) Same as in B, but for CBA CT and 333
CBA DE groups. (E) Scatter points show hit rate ratios for 8kHz and 40kHz as a function of 334
amplitude in the C57BL/6J CT (red) and DE (blue) groups between Periods I and V. Vertical lines 335
show SEM. Scatter points are overlapped with linear regression model fit in matching colors. 336
Shaded areas are 95% confidence intervals of the fit. Inter cept (I C) or slope (SL) Difference 337
appears if the p-value of the F-test showed significance for either parameter of the group 338
difference linear fit model (F-test, Bejnamini & Hochberg false discovery rate procedure applied. 339
Does not appear for non -significant, * for p < 0.05, & ** for p < 0.01). Dashed black horizontal 340
lines outline an NHR level of 1. Dashed black horizontal lines outline hit rate ratio 1 (Where mean 341
performance in both periods was the same) (F) Same as in (E) but for CBA CT and DE groups. 342
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343
Figure 3: Rescuing effects of DE emerge in Period 3 of the C57BL/6J group. 344
(A) (Left axis) Normalized hit rates for 4kHz, 8kHz, and 40kHz tones for CT C57BL/6J (red) and 345
DE C57BL/6J (blue) ToneBoxes. Data averaged over all SPL levels. The shaded error bar 346
represents the standard error of the mean. Red and blue arrowheads in the right panel for 40kHz 347
mark the point in the timeline (days 45 and 57) where mean NHR deviated from the baseline by 348
two standard deviations for CT and DE groups respectively. (Right axis) The absolute value of t-349
statistic from a two-sample t-test, if the t-test was performed at a given point in time. Green bars 350
show data points of statistical significance (t-test, p < 0.05). (B) Same as in (A), but for the CBA 351
CT and DE groups. 352
353
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354
Figure 4: Frequency-amplitude-dependent performance is not altered by DE in CBA mice. 355
(A) Normalized hit rate audiograms for all stimulus conditions for periods I (left) and V (right) of 356
the C57BL/6J CT group (upper row) and C57BL/6J DE group (middle row). Dashed lines indicate 357
quartiles of smoothed NHR. Red IQR lines for the DE group are plotted as CT reference. (lower 358
row) The ratio of normalized hit rates between CT and DE C57BL/6J. (B) Same as in (A) but for 359
the CBA CT and DE groups. 360
361
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362
Figure 5: DE performance increases are multiplicative across levels. 363
(A) Scatter points show normalized hit rates for 8kHz and 40kHz as a function of amplitude in the 364
C57BL/6J CT (red) and DE (blue) group during Period I (left column) and Period V (right column). 365
Vertical lines show SEM. Scatter points are overlapped with linear regression model fit in 366
matching colors. Shaded areas are 95% confidence intervals of the fit. Intercept (IC) or slope (SL) 367
Difference appears if the p-value of the F-test showed significance for either parameter of the 368
group difference linear fit model ( F-test, Bejnamini & Hochberg false discovery rate procedure 369
applied. Does not appear for non -significant, * for p < 0.05, & ** for p < 0.01). Dashed black 370
horizontal lines outline an NHR level of 1. (B) Same as in (A) but for CBA CT and DE groups. 371
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372
Figure 6: DE performance for quietest high-frequency tones increases after the first DE 373
period. 374
(A) The ratio of hit rates between CT and DE for all stimulus combinations of the C57BL/6J group. 375
Arrows: Differences for 40kHz emerge after day 40, while differences for 32kHz emerge around 376
day 65. Dashed vertical lines mark the individual periods. 377
(B) Same as in (A) but for the CBA group. 378
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Acknowledgments 468
We thank members of the Kanold lab for their comments on the manuscript. 469
We thank Dr. Behtash Babadi for his advice regarding interpreting the results of the manuscript. 470
Conflict of interest: The authors declare no competing financial interests. 471
Funding: Supported by NIH R01DC018790 (POK, HKL) 472
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Author contributions: 473
Conceptualization: POK, HKL, PJ 474
Methodology: PJ, POK 475
Investigation: PJ 476
Visualization: PJ, POK 477
Funding acquisition: POK, HKL 478
Project administration: PJ, POK 479
Supervision: POK 480
Writing – original draft: PJ, POK 481
Writing – review & editing: PJ, HKL, POK 482
483
Data and materials availability: All data supporting the findings from this study will be available 484
upon publication at the Johns Hopkins Data Archive (https://archive.data.jhu.edu). 485
Supplementary Materials 486
Materials and methods
487
Supplementary Figures S1-S6 488
Supplementary Table S1 489
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