AB003. The path towards translational medicine for common reproductive diseases

In: Ann Transl Med · 2015 · vol. 3(2) , pp. 4 · doi:10.3978/j.issn.2305-5839.2015.ab003 · W2281732555
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Genome-wide association studies identified seven genomic regions associated with endometriosis risk, and researchers are now investigating gene expression and epigenetic regulation in endometrial tissue to understand the functional impact of these genetic variations.

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This abstract outlines a research program utilizing genome-wide association studies to investigate the genetic architecture of common reproductive traits, specifically focusing on endometriosis, dizygotic twinning, and menarche age. The authors identified seven genomic regions significantly associated with endometriosis risk and emphasize the need for fine mapping and functional annotation to link these variants to specific target genes within the endometrium. Current efforts involve analyzing gene expression and epigenetic regulation in endometrial samples from carriers of risk alleles to understand how DNA sequence variations alter biological pathways. This paper is centrally about endometriosis — specifically the identification of genetic risk factors and the subsequent functional investigation of their impact on endometrial biology.

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Abstract

Genetic factors contribute to risk for many common traits and diseases affecting reproduction and fertility. We have used genome-wide association (GWA) studies to understand the genetic architecture and discover genomic regions associated with risk for endometriosis, dizygotic twinning, age at menarche and age at menopause. The next steps are to determine how DNA sequence variation alters regulation and/or function of specific genes and pathways to increase disease risk. Multiple approaches are required to interpret the genetic association results, identify the specific genes likely to be responsible, and obtain the necessary genomic evidence connecting the genetic results to the target genes. Strategies include fine mapping, functional annotation, genomics, and target gene identification through gene expression, epigenetics, and cell-based studies to define direct interactions between causal single nucleotide polymorphisms (SNPs) and target genes. GWA and replication studies have identified seven genomic regions with strong evidence for association with endometriosis risk. The target tissue for functional effects is not known, but current theories suggest changes in the endometrium. We are conducting studies of gene expression and epigenetic regulation in samples of endometrium in carriers of the risk alleles. Development of applications to use GWA data for risk prediction and studies of comorbidity also provide valuable insights into the genetic architecture of endometriosis and overlap in risk with other conditions such as ovarian cancer. Multidisciplinary studies combining genetics, genomics, functional biology, and clinical research will be essential better understand disease biology and translate the new knowledge into better outcomes for patients.
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Abstract

Genetic factors contribute to risk for many common traits and diseases affecting reproduction and fertility. We have used genome-wide association (GWA) studies to understand the genetic architecture and discover genomic regions associated with risk for endometriosis, dizygotic twinning, age at menarche and age at menopause. The next steps are to determine how DNA sequence variation alters regulation and/or function of specific genes and pathways to increase disease risk. Multiple approaches are required to interpret the genetic association results, identify the specific genes likely to be responsible, and obtain the necessary genomic evidence connecting the genetic results to the target genes. Strategies include fine mapping, functional annotation, genomics, and target gene identification through gene expression, epigenetics, and cell-based studies to define direct interactions between causal single nucleotide polymorphisms (SNPs) and target genes. GWA and replication studies have identified seven genomic regions with strong evidence for association with endometriosis risk. The target tissue for functional effects is not known, but current theories suggest changes in the endometrium. We are conducting studies of gene expression and epigenetic regulation in samples of endometrium in carriers of the risk alleles. Development of applications to use GWA data for risk prediction and studies of comorbidity also provide valuable insights into the genetic architecture of endometriosis and overlap in risk with other conditions such as ovarian cancer. Multidisciplinary studies combining genetics, genomics, functional biology, and clinical research will be essential better understand disease biology and translate the new knowledge into better outcomes for patients.

Keywords

Genome-wide association (GWA); genetic architecture; reproduction; fertility; endometriosis

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endometriosis

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