A Self-Attention Mechanism Neural Network for Detection and Diagnosis of COVID-19 from Chest X-Ray Images

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This study proposes a self-attention mechanism neural network to detect COVID-19 from chest X-rays, enhancing data and highlighting diagnostic features to aid clinicians.

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This preprint studied whether a deep learning model with a self-attention mechanism can detect and help diagnose COVID-19 from chest X-ray images, using an approach that includes data enhancement, a modified DPN-SE architecture, and interpretability via LIME visualizations. The authors used DPN-SE, adding an attention mechanism to the DPN network, and report improved performance while aiming to require less data preprocessing because the model benefits from increased dataset diversity. A major stated caveat is that the work is a preprint that has not been peer reviewed. Relevance to endometriosis: this paper is not about endometriosis or adenomyosis and does not explicitly discuss them; it was included in the corpus via a keyword match related to medical imaging/diagnostic modeling.

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Abstract

The new type of coronavirus is called COVID-19. The virus can cause respiratory diseases, accompanied by cough, fever, difficulty breathing, and in severe cases, it can also cause symptoms such as pneumonia. It began to spread at the end of 2019 and has now spread to all parts of the world. The limited test kits and increasing number of cases encourage us to propose a deep learning model that can help radiologists and clinicians use chest X-rays to detect COVID-19 cases and show the diagnostic features of pneumonia. In this study, our methods are: 1) Propose a data enhancement method to increase the diversity of the data set, thereby improving the generalization performance of the network. 2) Using the deep convolutional neural network model DPN-SE, an attention mechanism is added on the basis of the DPN network, which greatly improves the performance of the network. 3) Use the lime interpretable library to mark the X-ray, the characteristic area on the medical image that is helpful for the doctor to make a diagnosis. The model we proposed can obtain better results with the least amount of data preprocessing given limited data. In general, the proposed method and model can effectively become a very useful tool for clinical practitioners and radiologists.
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A Self-Attention Mechanism Neural Network for Detection and Diagnosis of COVID-19 from Chest X-Ray Images | Research Square window.SnipcartSettings = { analytics: { enabled: false } }; (function() { var accessVector = localStorage.getItem('access_vector') || ''; window.dataLayer = window.dataLayer || []; if (accessVector) { window.dataLayer.push({ user: { profile: { profileInfo: { snid: accessVector } } } }); } })(); (function(w,d,s,l,i){w[l]=w[l]||[];w[l].push({'gtm.start':new Date().getTime(),event:'gtm.js'});var f=d.getElementsByTagName(s)[0],j=d.createElement(s),dl=l!='dataLayer'?'&l='+l:'';j.async=true;j.src='https://www.googletagmanager.com/gtm.js?id='+i+dl;f.parentNode.insertBefore(j,f);})(window,document,'script','dataLayer','GTM-K279D39R'); Browse Preprints In Review Journals COVID-19 Preprints AJE Video Bytes Research Tools Research Promotion AJE Professional Editing AJE Rubriq About Preprint Platform In Review Editorial Policies Our Team Advisory Board Help Center Sign In Submit a Preprint Cite Share Download PDF Research Article A Self-Attention Mechanism Neural Network for Detection and Diagnosis of COVID-19 from Chest X-Ray Images Bo Cheng, Wei Xiang, Ruhui Xue, Hang Yang, Laili Zhu This is a preprint; it has not been peer reviewed by a journal. https://doi.org/ 10.21203/rs.3.rs-577494/v1 This work is licensed under a CC BY 4.0 License Status: Posted Version 1 posted You are reading this latest preprint version Abstract The new type of coronavirus is called COVID-19. The virus can cause respiratory diseases, accompanied by cough, fever, difficulty breathing, and in severe cases, it can also cause symptoms such as pneumonia. It began to spread at the end of 2019 and has now spread to all parts of the world. The limited test kits and increasing number of cases encourage us to propose a deep learning model that can help radiologists and clinicians use chest X-rays to detect COVID-19 cases and show the diagnostic features of pneumonia. In this study, our methods are: 1) Propose a data enhancement method to increase the diversity of the data set, thereby improving the generalization performance of the network. 2) Using the deep convolutional neural network model DPN-SE, an attention mechanism is added on the basis of the DPN network, which greatly improves the performance of the network. 3) Use the lime interpretable library to mark the X-ray, the characteristic area on the medical image that is helpful for the doctor to make a diagnosis. The model we proposed can obtain better results with the least amount of data preprocessing given limited data. In general, the proposed method and model can effectively become a very useful tool for clinical practitioners and radiologists. Artificial Intelligence and Machine Learning Computational Biology coronavirus respiratory diseases radiologists medical image Figures Figure 1 Figure 2 Figure 3 Figure 4 Figure 5 Figure 6 Figure 7 Full Text Additional Declarations No competing interests reported. Cite Share Download PDF Status: Posted Version 1 posted You are reading this latest preprint version Research Square lets you share your work early, gain feedback from the community, and start making changes to your manuscript prior to peer review in a journal. As a division of Research Square Company, we’re committed to making research communication faster, fairer, and more useful. We do this by developing innovative software and high quality services for the global research community. Our growing team is made up of researchers and industry professionals working together to solve the most critical problems facing scientific publishing. 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