Material and methods
79
Entomological longitudinal analysis 80
Our analysis basis on entomological surveillance observations provided by the Altopictus vector -81
control agency ovitrap collection in four different locations in mainland France, i.e. Pérols and 82
Murviel-les-Montpellier (Occitanie), Bayonne and Saint -Médard-en-Jalle (Nouvelle -Aquitaine; Fig. 83
1). According to the Corine Land Cover classification , the monitored areas correspond to 84
discontinuous urban fabric, whereas some ovitraps in Bayonne were located within continuous 85
urban fabric (European Union’s Copernicus Land Monitoring Service information, 2020) . Ovitraps 86
consist of artificial egg-laying containers made of 3-Liter black plastic buckets filled with 2 L of Bti -87
treated (Bacillus thuringiensis israelensis biolarvicide) tap water. A floating polystyrene square (5 x 88
5 x 2 cm) provided a substrate for oviposition. They are used to monitor the oviposition intensity, i.e. 89
the abundance of laid eggs, a proxy of the density of locally active females. These ovitraps have been 90
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inspected every 1 -2 weeks between 2023 and 2024 (Tab. SI4). Surveillance operations were 91
interrupted from June 2024 onwards in Bayonne and Saint -Médard-en-Jalle. Records have been 92
aggregated using the mean value for each inspection date and site. 93
94
Fig. 1 - Spatial setup of the Altopictus ovitrap surveillance network in southwestern France: a) Pérols, b) Murviel -les-95
Montpellier, c) Bayonne, d) Saint-Médard-en-Jalle, over a OpenStreetMap land cover and land use layer. 96
To assess the impacts of different weather conditions over oviposition activity, we first analyzed the 97
ovitrap series site by site. Each time series was divided into three seasons, i.e. “spring” (May-June), 98
“summer” (July -August) and “autumn” (September -October). For each site and season, we 99
determined the presence of an interannual trend via the two -tailed two-samples Wilcoxon test by 100
comparing the statistical distribution of the ovitrap records of the two years of collection. 101
Input data 102
Both mechanistic and statistic models are driven by weather inputs. We retrieved daily precipitation 103
(mm), daily mean, maximum and minimum temperatures ( °C), relative humidity (%), average and 104
maximum wind speed (m/s) from MétéoFrance (details in Tab SI4). We retrieved human population 105
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density raster at 30”, aggregated over a grid of 0.1° , based on the 2015 GPWv4 data for 2015 (Doxsey-106
Whitfield et al., 2015). 107
Statistical model 108
In statistical modelling, the response variables and their predictors have to be defined first. Here, we 109
considered the oviposition (measured as “ daily number of eggs per ovitrap ”), averaged by site and 110
collection date, as the response variable. To distinguish between those weather drivers that induce 111
the onset of mosquito activity and those governing oviposition intensity, we developed two separate 112
models. The first model, called “presence/absence model”, aims to identify the conditions that 113
allow mosquito activity with a binary response (1 = presence of eggs, 0 = absence). The second, 114
called “abundance model”, aims to predict the oviposition intensity as a continuous variable (mean 115
number of eggs per trap per day, restricted to positive trapping events). The modeling pipeline 116
described below was implemented for both model types. 117
To investigate the temporal relationships between mosquito activity and weather conditions, we first 118
computed cross-correlation maps (CCMs) between the response variable and weekly averaged 119
weather variables at lags ranging from 0 to 12 weeks prior to each trapping date (Curriero et al., 120
2005). CCMs enable to assess and visualize associations between two time series, such as 121
mosquito abundance and weather conditions, which may be lagged in time. Here, we measured the 122
strength of the association using the Distance correlation coefficient (Székely et al., 2007). Distance 123
correlation captures non-linear associations between variables, hence being more suited to analyze 124
complex ecological systems compared to linear correlation coefficients. These CCMs were 125
computed for each weather variable at each site to identify site -specific patterns, and were also 126
pooled across all sites to assess overall associations for each environmental variable. 127
For each pooled weather variable, the lag with the strongest correlation to the response variable was 128
retained as a predictor for multivariate modeling. Weather variables displaying weak associations 129
(distance correlation coefficient 0.7), by selecting those 131
predictors with the highest ecological relevance and interpretability. 132
The final set of selected predictors was used to train multivariate Random Forest (RF) models 133
(Breiman, 2001). Binary classification RFs were applied for presence modeling, while regression RFs 134
were used for abundance modeling. To avoid overfitting and inflated performance estimates, we 135
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implemented a spatial leave-one-site-out cross-validation (LOSO-CV) framework. In this approach, 136
models were iteratively trained on data from three sites and tested on the fourth. This strategy not 137
only mitigates overfitting but also provides a robust assessment of the model’s generalizability to 138
previously unseen locations, for both presence/absence and abundance predictions (Meyer et al., 139
2018). Finally, the outputs of the presence and abundance models were combined to generate a 140
unified prediction. Specifically, if the predicted probability of presence exceeded the threshold value 141
of 0.5, the corresponding value from the abundance model was retained; otherwise, the prediction 142
was set to zero. 143
Mechanistic model 144
As a mechanistic model, we used the model by Metelmann et al. (2019), currently used and validated 145
in temperate areas in Europe (Barman et al., 2025; Radici et al., 2025), which describes the dynamics 146
of the mosquito population (mosquito/ha) via ordinary differential equations into five stages (eggs 𝐸, 147
diapausing eggs 𝐸𝑑, larvae and pupae as juveniles 𝐽, unfed immature female adults 𝐼, mature female 148
adults 𝐴). These equations specify mortality, development and fertility rates, which rely on 149
environmental (photoperiod 𝑃 and human density 𝐻) and weather (rainfall 𝑅 and temperature 𝑇) 150
drivers. 151
{
𝐸˙ =𝛽(𝑇)(1−𝜔(𝑃))𝐴−(ℎ(𝑅,𝐻)𝛿𝐸+𝜇𝐸(𝑇))𝐸
𝐽˙=ℎ(𝑅,𝐻)(𝛿𝐸𝐸+𝜎(𝑇,𝑃)𝛾(𝑇)𝐸𝑑)−(𝛿𝐽(𝑇)+𝜇𝐽(𝑇)+ 𝐽
𝐾(𝑅,𝐻))𝐽
𝐼˙=1
2𝛿𝐽(𝑇)𝐽−(𝛿𝐼(𝑇)+𝜇𝐴(𝑇))𝐼
𝐴˙=𝛿𝐼(𝑇)𝐼−𝜇𝐴(𝑇)𝐴
𝐸𝑑˙ =𝛽𝜔(𝑃)𝐴−ℎ(𝑅,𝐻)𝜎(𝑇,𝑃)𝐸𝑑
152
153
Where 𝛽 represent the fertility rate, 𝛿𝐸, 𝛿𝐽 and 𝛿𝐼the development rate of eggs, juveniles and adults, 154
𝜇𝐸, 𝜇𝐽, 𝜇𝐴, their mortality, 𝜔 the fraction of diapausing laid eggs, ℎ the hatching rate, 𝜎 the fraction of 155
diapausing eggs ready to hatch, 𝛾 the probability of winter survival, 𝐾 the carrying capacity of 156
juveniles (Table SI1 for details on weather dependencies ). This model allowed to estimate the 157
observed oviposition abundance via the indicator 𝐿𝐸𝑖𝑡 of eggs laid per day per hectare in site at time 158
in site 𝑖 at time 𝑡: 159
𝐿𝐸𝑖𝑡=𝛽̃𝑖𝑡𝐴𝑖𝑡 160
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Where 𝐴𝑖𝑡 is the simulated density of adult female mosquitoes, and 𝛽̃𝑖𝑡 is the temperature -161
dependent fertility rate. In order to compare our simulations with observed ovitrap data, we averaged 162
𝐿𝐸𝑖𝑡 with a moving window of two weeks and we normalized it with respect to the highest value. 163
Model evaluation 164
We assessed the ability of both models to capture the temporal dynamics of mosquito oviposition 165
by computing the Spearman and Pearson correlation coefficients between predicted and observed 166
egg counts. The statistical significance of each correlation was evaluated using a two -sided 167
Student’s t-test. 168
Analysis of weather determinants of oviposition 169
To investigate the role of weather drivers in shaping oviposition dynamics, we interpreted the trained 170
machine learning (ML) models using Variable Importance Plots (VIPs) and Partial Dependence Plots 171
(PDPs). VIPs measure each variable’s contribution to the model performance, while PDPs visualize 172
its average effect on predictions, accounting for interactions with other predictors. These tools 173
enable to highlight which environmental variables mostly influence mosquito presence or 174
abundance. 175
To complement these global interpretations with fine-scale ecological insights, we applied the Local 176
Interpretable Model-agnostic Explanations (LIME) method (Ribeiro et al., 2016). LIME approximates 177
the complex ML model locally using a simpler and interpretable surrogate (e.g. a linear model). It 178
provides local contributions of each predictor to individual model predictions, indicating both the 179
direction (positive = increasing, negative = decreasing) and the magnitude of influence relative to 180
other predictors at that specific site and time point. 181
Analysis of weather-driven demographic determinants of oviposition 182
For the sites and seasons in which the Wilcoxon test of ovitrap abundance revealed a significant 183
difference between 2023 and 2024 (p -value < 0.05), we analyzed the statistical significance of the 184
weather-dependent demographic rates between those two years using the same Wilcoxon test. The 185
weather-dependent demographic rates considered here are the fertility (𝛽), juvenile development 186
(𝛿𝐽), immature adult development ( 𝛿𝐼), egg survival ( 𝑒−𝜇𝐸), juvenile survival ( 𝑒−𝜇𝐽), adult survival 187
(𝑒−𝜇𝐴), hatching (ℎ), carrying capacity (𝐾). The carrying capacity was considered as a demographic 188
trait as its role in intraspecific competition makes it proportional to survival rate. By testing the inter-189
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(which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made
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annual variability of those rates , we identified th ose that varied the most “consistently” with 190
oviposition, and can be considered as determinants of mosquito activity. 191
Hereinafter, we will use “ inconsistent” as a synonym for “significantly sharing the opposite 192
interannual trend as the observed oviposition” and, “consistent” as a synonym for “significantly 193
sharing the same interannual trend as the observed oviposition”. 194
Software 195
All analyses were conducted using open -source software. The R programming language (R Core 196
Team, 2024) served as the primary platform. The Wilcoxon statistical analysis of time series was 197
performed using the ‘stat’ package (version 4.4.1). Correlation analyses were performed with the 198
‘correlation’ package (0.8.8; Makowski et al., 2020) . Random forest models were fitted using the 199
‘caret’ (7.0-1; Kuhn, 2008) and ‘ranger’ (0.17.0) packages, while spatial folds for cross -validation 200
were generated with the ‘CAST’ package (1.0.3). Model interpretability analyses relied on the ‘vip’ 201
(0.4.1; Greenwell & Boehmke, 2020) and ‘pdp’ (‘0.8.2’; Greenwell, 2017) packages to produce 202
variable importance and partial dependence plots, respectively, and the ‘lime’ package (0.5.3, 203
Hvitfeldt et al., 2022) to perform the LIME analysis. Among the inputs of the mechanistic model, we 204
retrieved the photoperiod (in hours) using the ‘suncalc’ (0.5.1), based on the latitude, longitude and 205
date. 206
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