Keywords
pertussis; pertussis infection; pertussis vaccines; seroprevalence; serosurveys
Corresponding author: Dr. Matthieu Domenech de Cellès. Address: Max Planck Institute for Infection
Biology, Charitéplatz 1, Campus Charité Mitte, 10117 Berlin, Germany. Email: domenech@mpiib-
berlin.mpg.de
*These authors contributed equally.
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Abstract
Seroepidemiology has significant potential for uncovering the unreported burden of infectious diseases.
However, for diseases without well -defined serological correlates of protection, the phenomenon of
immune boosting—whereby pathogen exposure triggers a detectable immune response without causing
a transmissible infection—can complicate the interpretation of seroprevalence data from serosurveys.
This issue is relevant to pertussis, a highly contagious and vaccine -preventable disease that remains a
significant public health concern worldwide. Here, we aimed to evaluate the reliability of pertussis
serosurveys—in particular, how immune boosting may cause these studies to overestimate transmissible
infections—based on a population-based model of pertussis transmission that tracked the dynamics of
infection, immune boosting, and seropositivity of IgG against pertussis toxin. By fitting this model to
seroprevalence data from the late whole -cell pertussis vaccine era in six European countries, we
estimated immunity conferred by infection or vaccination to last, on average, for several decades. We
then predicted the prevalence and positive predictive value (PPV) —the proportion of true positives—
of seropositivity in serosurveys among adult age groups across twelve countries broadly representative
of transmission patterns worldwide. Overall, we predicted a low PPV across multiple scenarios,
especially in young adults aged 20–39 years, where it dropped below 50% in almost all tested scenarios.
Thus, the common interpret ation of seroprevalence as a measure of recent infections may lead to an
overly pessimistic view of pertussis circulation. Our model is applicable to numerous other infectious
disease systems and may be used to efficiently synthesize evidence from multiple data streams,
including case-based and seroprevalence data.
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Introduction
Pertussis, also known as whooping cough, is a highly contagious respiratory disease caused
predominantly by infection with the bacterium Bordetella pertussis, as well as other bacteria of the
Bordetella genus (1). Historically, this common childhood disease led to high infant mortality (2), until
the development and widespread use of whole -cell pertussis (wP) vaccines significantly reduced
reported cases during the second half of the twentieth century (3, 4). While wP vaccines remain widely
used globally, many high -income countries have switched to acellular pertussis (aP) vaccines that
became available in the 1990s (5, 6). Despite relatively high vaccine coverage worldwide (~85% for
the primary series in the last ten years (7)), the burden of pertussis remains considerable, with an
estimated 161,000 global deaths in children <5 years in 2014, mostly in low -income countries (8).
Unexpectedly, a long -term resurgence of pertussis has also been observed in several high -income
countries with sustained high vaccination coverage, including the USA, Sweden, and Denmark (5).
Although reported pertussis cases plummeted shortly after the start of the COVID-19 pandemic (9–11),
many countries—especially in Europe (12)—are now witnessing large epidemics, resulting in infant
deaths (13). These alarming trends highlight the ongoing threats of pertussis, which remains one of the
least controlled vaccine-preventable diseases worldwide.
A major challenge in pertussis epidemiological research is to accurately estimate the rates of pertussis
infections. Standard surveillance systems often fall short because infections are reported only when
cases exhibit symptoms, seek healthcare, and receive a clinical or laboratory diagnosis—with potential
case loss at every step (14). For pertussis, this problem is thought to be acute for at least three reasons.
First, asymptomatic infections may be common, especially (but not only) among vaccinated age groups
(15). Second, clinical diagnosis based on typical pertussis symptoms —such as paroxysmal coughing,
whooping, and posttussive vomiting —can be inaccurate (16). Third, non -pediatricians may lack
awareness of pertussis disease and fail to diagnose it in adult patients (17). These factors collectively
contribute to case underreporting, which is estimated to be substantial for pertussis (18–20).
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Due to the limitations of standard surveillance data, seroepidemiology is frequently used to assess the
prevalence of antibodies against B. pertussis antigens, typically immunoglobulin G (IgG) against
pertussis toxin (PT, a toxin unique to B. pertussis ) (21). However, since serological correlates of
protection remain unidentified for pertussis (22), anti-PT IgG titers do not correlate well with immunity
against infection. Indeed, anti -PT IgG antibodies from vaccination decrease to undetectable levels
within a few years, while protection persists for longer (22). This continued protection may be attributed
to the relatively slow progression of pertussis infection (mean serial interval of ~3 weeks (23)), such
that recall responses from memory cells may be rapid enough to provide partial protection, even in the
absence of circulating antibodies (24). Hence, in most seroprevalence studies, or serosurveys,
seropositivity is interpreted as evidence of a recent infection, where the recency depends on the IgG
threshold used to define seropositivity. As both symptomatic (25) and asymptomatic (26) infections
generally induce an immune response, serosurveys can hypothetically quantify recent transmission
levels, including asymptomatic infections. As a result, the baseline hypothesis of many serosurveys is
that seroprevalence is a more accurate measure of pertu ssis circulation compared to case -based
surveillance data, especially among adults (21). Seemingly supporting this view, studies have found
significant discrepancies between infection rates derived from serosurveys and those reported through
surveillance data, with serosurveys often revealing infection rates that are much higher—sometimes by
several orders of magnitude (21).
Several investigators, however, have questioned this view and cautioned that serological data may lack
specificity (27, 28). This criticism is based on the fact that serology alone cannot distinguish between
infection and subclinical immune boosting (29). In other words, exposure to B. pertussis may trigger an
immune boost—or anamnestic response—in individuals protected by earlier infection or vaccination,
leading to seropositivity but not to a productive infection that can be transmitted to other hosts ( i.e., a
transmissible infection). To clarify our terminology regarding the outcomes of B. pertussis exposures
resulting in seropositivity, we henceforth restrict our definition of infection to an exposure leading to
transmissible infection (either symptomatic or asymptomatic), and we define other exposures as
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subclinical immune boosts. We believe this definition is justified, as transmissible infections are
arguably the most pertinent from an epidemiological and evolutionary perspective.
Empirical evidence supports the idea that immune boosting occurs for pertussis (30). A household study
conducted as part of the aP clinical trial in Sweden reported frequent observations of seropositivity
without culture positivity (31). Similarly, in a human challenge experiment in adults aged 18 –45, the
highest inoculum dose of 100,000 cfu caused seroconversion in all participants; however, extensive
environmental sampling could not detect any bacterial shedding, thus suggesting the ab sence of
transmissible infection (26). In a study of aP vaccines in adults over 50 years in Australia, vaccine
effectiveness was substantially underestimated when cases were identified by single -titer serology,
compared to PCR -confirmed cases; the authors interpreted this discrepancy as evide nce of case
misclassification and poor diagnostic specificity of serology in their setting (32). This body of evidence
suggests that serosurveys may overestimate the incidence of pertussis infections.
Despite occasional mentions of these complexities (28, 29), the potential unreliability of serosurveys
and the implications of immune boosting on the interpretation of seropositivity are frequently
overlooked in the literature. To support this assertion, we reviewed 19 pertussis seroprevalence studies
published in the last five years (see PRISMA flow diagram in Fig. S1). We specifically examined how
investigators interpreted seropositivity and whether they addressed the issue of immune boosting or,
more broadly, the possibility of false positives among seropositiv e cases. Through this analysis, we
identified two broad categories of seroprevalence studies with distinct aims. In the first category of
studies (Table S1), the investigators considered low to moderate anti -PT IgG thresholds to evaluate
immune protection. However, the threshold to differentiate protection from lack of protection varied
across studies, ranging from 5 IU/mL (33, 34) to 50 IU/mL (35). Furthermore, these studies were
inherently limited because anti -PT IgG titers do not correlate well with immunity, as the serological
correlates of protection remain unidentified for pertussis (22). Only two studies explicitly recognized
this limitation (33, 36).
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In the second group of studies (Table S2), the investigators defined moderate to high anti -PT IgG
thresholds to evaluate recent exposure or infection. With few exceptions (36–39) , the threshold
considered was 100 IU/mL; based on this cut-off, seropositivity was generally interpreted as evidence
of exposure or infection within the last year. However, a few studies interpreted seropositivity as
evidence of more immediate exposure or infection (acute infection (33, 34) or within the past 58.6 days
(40)), and many studies did not explicitly define what constitutes recency. In four studies (33, 37, 41,
42), the term “exposure” was used instead of “infection," but no definition of exposure was provided.
Notably, the issues of immune boosting and false positives were not discussed in any study, highlighting
a lack of awareness surrounding this problem.
Because of this lack of awareness, the reliability of serosurveys has not been systematically examined.
Bridging this knowledge gap is essential to reconcile the different estimates of pertussis infection from
serosurveys and case -based surveillance and to evaluate the impact of pertussis vaccines more
accurately. Here, we developed a population -based model of pertussis transmission that tracked the
dynamics of infection, immune boosting, and seropositivity. Through a comprehensive simulation
study, we aime d to predict the prevalence and reliability of seropositivity in various countries
worldwide.
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Methods
Model structure
We developed a stochastic model of pertussis transmission that generated serological endpoints in
addition to standard prevalence and incidence endpoints (Fig. 1). Briefly, the backbone of this model
was similar to that of a previous model developed to explain the epidemiology of pertussis in the USA
(43, 44). The model distinguished between primary infections in fully susceptible individuals (i.e., never
vaccinated or infected) and secondary infections in susceptible individuals whose immunity was primed
by earlier vaccination or infection. Based on earlier evidence in the USA (43, 44), we assumed that
vaccine-derived immunity was imperfect and might immediately fail (primary vaccine failure), with
subsequent waning immunity. Similarly, infection-derived immunity was assumed to wane over time.
To generate serological endpoints, the model tracked the population -level dynamics of anti -PT IgG
seroconversions, seropositivity, and seroreversions (Fig. 1). Unless otherwise stated, seropositivity was
defined as an antibody titer exceeding 100 IU/mL, a standard threshold used in multiple seroprevalence
studies (Refs. (21, 45) and Table S2). Following recovery from either a primary or secondary infection,
seropositivity was assumed to occur and last, on average, 𝑡! years. In individuals with either infection-
or vaccine-derived immunity, exposure to B. pertussis also led to seropositivity (but not to transmissible
infection) at a rate proportional to the force of infection 𝜆. Because such seropositive cases arise due to
immune boosting, the proportionality constant 𝜌 is called the immune-boosting coefficient (30). This
parameter controls the sensitivity of immune boosting: for 𝜌 1 an exposure insufficient for infection can still
Result
in immune boosting. The latter scenario, known as hypersensitive boosting, can also be
interpreted as follows: an exposure dose of B. pertussis antigen lower than what is needed for infection
can still result in immune boosting.
We note that, in this model, seropositivity implies protection from infection; the converse, however, is
not true, as seronegative individuals ( V and R compartments in Fig. 1) can still be protected. Hence,
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seropositivity is assumed to be sufficient but not necessary for protection against infection, consistent
with the fact that anti-PT IgG antibodies are not a serological correlate of protection (22). We also note
that seropositivity due to recent vaccination is ignored in this model. This assumption is justified
because recently vaccinated individuals are generally excluded from serosurveys to limit the risk of
false positives from causes different from exposure or infection (45).
By design, this model thus produced serological endpoints—such as seroprevalence and sero-incidence
rates—comparable to serosurveys. In the following, we focus only on seroprevalence, the endpoint most
typically estimated in these surveys (see Fig. 1 for t he model-based definition). However, because we
assume that seropositivity lasts, on average, one year (see below), the seroprevalence approximately
equals the yearly sero-incidence rate in our model. To assess whether seropositivity can reliably indicate
a recent infection, we further calculated the positive predictive value (PPV) of serology, which is
defined here as the conditional probability of past infection given seropositivity. Equivalently, the PPV
represents the proportion of true cases among seropositive cases in serosurveys (PPV = true positives /
(true positives + false positives)); it ranges from 0 (all seropositives result from immune boosting) to 1
(all seropositives result from a transmissible infection).
Hence, this model allowed us to parsimoniously capture and study the interpretation problem described
in the introduction: without other information, seroprevalence includes both recent transmissible
infections and immune boosts; consequently, seropositivity does not always indicate a recent infection,
which may lead to false positives and a low PPV of serology for a given prevalence of actual infections.
Model parametrization
Fixed model parameters
The model was structured by age, dividing individuals into two age groups during the first year of life
and into 1-year age groups from ages 1 to 79, resulting in a total of 81 age groups. The first age group
represented newborns aged <2 or <3 months, refl ecting current pertussis vaccination schedules that
recommend administering the first vaccine dose a few months after birth (5). Contacts between age
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groups were parameterized using social contact matrices (SCMs) derived from the work of Mistry et
al. (46). These SCMs were available in 35 countries worldwide and provided an age resolution of one
year from age 0 to 79, enabling us to accurately capture contact patterns among infants and preschool
children. Additionally, the model incorporated country -specific population age structures based on
demographic data from 2010, as provided by Mistry et al. (46).
The main transmission parameters were fixed based on earlier modeling studies (43, 44) . These
parameters included the average latent and infectious periods and the relative transmissibility of
secondary infections (Table 1). Importantly, since we focused exclusively on infection endpoints, we
did not add an observation model to link our model outputs to reported disease cases.
Some serological parameters were assumed to be known and fixed according to a previous modeling
study of the kinetics of anti -PT IgG after a lab -confirmed infection [5]. Specifically, we used the
posterior distribution from the best-fitting power decay model described by Teunis et al. (25) to estimate
the average time to seroconversion after exposure ( 𝑡" = 23 days) and the average duration of
seropositivity (𝑡! = 1 year), both defined for a seropositivity threshold of 100 IU/mL.
Estimated model parameters
In contrast to the fixed parameters described above, the immune -boosting coefficient and the duration
of immunity were assumed to be unknown. This assumption was justified because of structural
differences between our model and previous immune-boosting models (30, 47–49), which prevented us
from directly incorporating estimates from earlier studies. For example, though both our model and
Lavine et al.’s model (30, 48) stratify immunity into a boosted and waning stage, the duration spent in
the boosted stage (representing the duration of seropositivity) is shorter in our model. As a result, using
the estimates from Lavine et al. would lead to a higher force of infection in our model, requiring
parametric adjustment (e.g., by increasing immune boosting or extending the duration of immunity) to
ensure comparability between the two models. In addition, there remains considerable uncertainty in
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the estimates of the immune -boosting coefficient, which were estimated at ≥10 in Ref. (30) and 6.6
(0.6–66) in Ref. (48).
To simplify our analysis, we further assumed that infection - and wP-derived immunities had identical
properties in terms of immune boosting (𝜌# = 𝜌$ = 𝜌) and the average duration of protection (𝛼#
%& =
𝛼$
%& = 𝛼%&). This assumption is supported by immunological evidence showing that both natural
infection and wP vaccination elicit a similar immune response (50, 51), as well as epidemiological
evidence from modeling studies (49, 52).
To estimate these two unknown parameters, we fitted our model to seroprevalence data from two large
serosurveys in Europe (53, 54). We focused on these two studies because their results were standardized
to ensure comparability of the serological assays across the participating countries. The first study,
conducted in six countries in the mid-1990s, covered all age groups and reported seroprevalence based
on a seropositivity threshold of 125 IU/mL (53). The second study, conducted in fourteen countries
during the early 2010s, focused only on adults aged 20 –39 and reported seroprevalence based on a
seropositivity threshold of 100 IU/mL (54).
To include countries in our study, we applied three criteria:
1. Social contact data available from Mistry et al. (46)
2. Stable high (>80%) vaccine coverage from the start of wP vaccination until the collection of
serological samples.
3. Switch to aP vaccines for primary immunization ≤5 years before the collection of serological
samples.
These criteria, thus, restricted our analysis to countries with mature and stable vaccination programs
before or very shortly after the switch to aP vaccines. Of note, we did not consider a more recent
European serosurvey (41) because all participating countries had switched to aP vaccines >5 years
before sample collection.
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In each selected country, we ran 10 stochastic simulations from the beginning of wP vaccination until
the serological survey period. We then calculated the model -predicted seroprevalence in adults aged
20–44 (for countries from Ref. (53)) or 20 –39 (for countries from Ref. (54)). For model -data
comparison, we used weighted linear regression with the observed seroprevalence as the outcome and
the predicted seroprevalence as an offset, with weights equal to the inverse variance of the observed
seroprevalence estimates. Such weighting allowed us to account for the statistical uncertainty due to the
limited sample size of the serosurveys. In this regression model, the opposite of the intercept thus
represented the mean weighted squared error (MWSE) between the model predictions and the data.
We repeated this procedure for multiple pairs of the immune-boosting coefficient and average duration
of immunity (𝜌, 𝛼%&). Specifically, we considered four values of immune -boosting (0.5, 1, 2, 5) and
multiple average durations of immunity ranging from 10 to 90 years (by increments of 10 years). Of
note, in the absence of immune boosting (𝜌 = 0), the duration of vaccine-derived immunity follows an
exponential distribution (with rate 𝛼) and the duration of infection -derived immunity a generalized
Erlang distribution (a sum of two exponential distributions with rates 1/𝑡! and 𝛼). In both cases, the
duration of immunity is inherently variable, with a large fraction of individuals losing immunity before
the average duration (63% for the exponential distribution). Any pair resulting in a non -significant
MWSE (i.e., not significantly different from 0) was considered an admissible estimate consistent with
the data. For a given immune -boosting level, we calculated an approximate 95% confidence interval
for the average duration of immunity as the range of all admissible estimates.
Model predictions across representative countries
NGM clustering
To get a broader picture of the potential shortcomings of seropositivity, we predicted the seroprevalence
and PPV of serology from serosurveys across various countries worldwide. To simplify our analysis,
we did not consider all 35 countries with social contact data available from Mistry et al. (46). Instead,
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we clustered the next-generation matrices (NGMs) to identify groups of countries with broadly similar
transmission dynamics.
In every country, we first calculated the NGM and the corresponding basic reproduction number ( R0,
defined as the leading eigenvalue of the NGM) (55). Next, we computed the pairwise Manhattan
distance between every pair of country -level NGMs to create a dissimilarity matrix encompassing all
countries. Finally, we applied agglomerative nested hierarchical clustering and used the silhouette
Method
to determine the optimal number of clusters. For every cluster with ≥2 countries, we selected
the country with the largest population as the representative for that cluster.
Simulation protocol
In every representative country identified through NGM clustering, we simulated our serotransmission
model for 150 years to reach equilibrium in the prevaccine era and another 150 years in the vaccine era.
We ran ten replicate stochastic simulations and recorded the seroprevalence in three adult age groups—
20–39, 40–59, and 60–79—for the last twenty years of the simulated period (200 simulation -years in
each age group). We considered these specific age groups because serosurveys often focus on adults
(41, 54), in whom pertussis is less likely to be reported.
Numerical implementation & Code availability statement
The serotransmission model was developed using the pomp package (version 5.10) (56, 57) in R version
4.4.1 (58). The NGM clustering was performed using the R package clValid (59), with visualization
done using the package factoextra (60). All programming codes are currently available on GitHub
(https://gitfront.io/r/MDdC/xSdjztUmzRY3/Pertussis-seroprevalence/) and will be archived in
Edmond, the Open Data Repository of the Max Planck Society, after publication.
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Results
Estimation and model fit to seroprevalence data
After applying our inclusion criteria (Table S5), we selected six countries for the model -data
comparison of seroprevalence. These included four countries (Finland, France, East Germany, and the
Netherlands) from Ref. (53) and two countries (Lithuania and Romania) from Ref. (54). Serological
samples were collected approximately 30 –45 years after the start of wP vaccination in the first four
countries and 50 years after in the latter two. In all six countries, the primary vaccine series started 2–3
months after birth with an addi tional booster dose at age 1 –3 years, and the vaccination coverage
remained high (over 85%) until the serosurvey (Table S6). Keeping in mind the different seropositivity
thresholds used in the two studies (100 IU/mL and 125 IU/mL), the seroprevalence estimates were fairly
consistent across countries, ranging from 0.9% (standard error [SE]: 0.2 %) in the Netherlands to 2.9%
(SE: 0.5%) in Finland.
The model fit to seroprevalence data for every immune -boosting scenario is displayed in Fig. 2. The
average duration of infection/wP-derived immunity was estimated at several decades in all scenarios,
with point estimates ranging from 30 to 50 years (Table 2). These averages translated into a fraction of
10–15% of vaccinees losing immunity within 5 years and 18 –28% within 10 years. These estimates
resulted in a low MWSE (<0.5%) in every scenario, demonstrating strong model -data agreement
irrespective of the fixed boosting level. Hence, the immune-boosting coefficient could not be estimated
from these data. Across the scenarios, the PPV of serology decreased as immune boosting increased,
with a range (across countries) of 47 –62% for the lowest boosting level and 6–12% for the highest
(Table 2). These results suggest that the seroprevalence data were consistent with a long average
duration of immunity, with immune boosting accounting for a large part —if not the majority —of
seropositive cases.
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NGM clustering
The clustering analysis identified 11 clusters among the 35 country-level NGMs. We decided to separate
the China NGM (initially grouped with the NGMs from Australia, Canada, and the US), resulting in 12
clusters overall. As shown in the resulting dendrogram (Fig. S2), the number of countries in each cluster
varied, ranging from 1 (Israel, China) to 5. Some clusters comprised countries from the same
geographical region (e.g., the Norway-Denmark and France-Italy-UK clusters), while others included
geographically distant countries ( e.g., the India -South Africa cluster). To reduce our subsequent
analysis, we selected one representative country from each cluster, resulting in the following 12
countries: China, Czechia (aka the Czech Republic), Denmark, Germany, India, Israel, Japan, the
Netherlands, Sweden, Switzerland, the UK, and the USA. The corresponding SCMs are plotted in Fig.
S3.
Model predictions in 12 representative countries
The model reached equilibrium across all boosting levels in the 12 countries (see Fig. S4 for
representative time series in the USA). Even though our model did not include seasonality in
transmission, the simulated seroprevalence exhibited multiannual cycles in the hyper-sensitive boosting
scenarios (𝜌 > 1). This behavior has been reported in previous theoretical analyses of hyper -sensitive
boosting models (30, 61).
Figure 3 shows the variation in seroprevalence and PPV across countries, age groups, and immune -
boosting levels based on an average duration of immunity of 40 years (consistent with the
seroprevalence data for all boosting levels; see Table 2). The predicted seroprevalence ranged from 0.5
to 2.5%, displaying large variability across scenarios. The key factors contributing to this variability
were age and immune-boosting levels, with seroprevalence predicted to increase as age decreased or
immune boosting i ntensified. In contrast, variations in SCMs resulted in less variability in
seroprevalence.
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The PPV of serology in seroprevalence studies ranged from 20 to 80% across scenarios. As for the
seroprevalence, the PPV varied sensitively with the strength of immune boosting and age. Specifically,
the PPV increased with age but decreased as the immune -boosting strength increased. Consequently,
seropositivity was predicted to be most reliable in the elderly (60 –79 yr) when boosting was low and
least reliable in young adults (20–39 yr) when boosting was high.
In Table 3, we present additional predictions of seroprevalence and PPV across all scenarios consistent
with the empirical seroprevalence data. Overall, the median predicted seroprevalence (PPV) from the
model was in the range 0.6 –2.2% in 20 –39, 0.4 –1.8% i n 40 –59, and 0.2 –1.1% in 60 –79. These
additional simulations confirmed the variations observed in Fig. 3: for fixed duration of immunity and
immune-boosting strength, seroprevalence decreased while the PPV of serology increased in older age
groups; in cont rast, when the duration of immunity and age were held constant, stronger boosting
resulted in higher seroprevalence but lower PPV. Additionally, at fixed age and immune-boosting level,
a shorter duration of immunity led to both higher seroprevalence and PP V of serology. These results
illustrate that the reliability of serology in seroprevalence studies varies with age and the characteristics
of immunity, which complicates the interpretation of serosurveys when these characteristics are
unknown.
To better understand how the prevalence and reliability of seropositivity vary with age, we dissected
seroprevalence across different age groups (Fig. 4). At a fixed boosting level, the force of infection
decreased with age, reflecting general age-specific contact patterns, particularly the lower contact rates
in the elderly (Fig. S3). Meanwhile, the fraction susceptible to infection increased with age due to the
gradual loss of infection-/wP-derived immunity. As a result of these two effects, the seroprevalence due
to true infections peaked in the intermediate age group of 40 –59 yo. Conversely, the seroprevalence
resulting from immune boosts declined as age increased, as loss of immunity gradually reduced
protection against infection and thus opportunities for immune boosting in older age groups. Overall,
this decline outweighed the variations in the true seroprevalence so that the overall seroprevalence
decreased with age. Consequently, seropositivity was less frequent but also more likely to represent a
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true infection because of reduced immune boosts in older age groups. These results highlight the
complexity of interpreting seropositivity and suggest that seroprevalence may not even qualitatively
capture age variations in infection.
We repeated these simulations to examine how immune-boosting strength affects seroprevalence (Fig.
4). In a given age group, the force of infection was predicted to decrease as the strength of immune
boosting increased. This effect can be explained as follows: assuming all other factors remain constant,
increasing the strength of immune boosting is analogous to extending the duration of immunity (Fig.
1), resulting in reduced circulation and a lower prevalence of infection —and thus a lower force of
infection—across age groups. As a result, the seroprevalence due to true infections decreased with
stronger immune boosting. In contrast, the seroprevalence from immune boosts increased with immune-
boosting strength. This increase dominated the variations in seroprevalence from true infections, so that
the overall seroprevalence increased with immune -boosting strength. Thus, higher levels of immune
boosting resulted in fewer true positives ( i.e., seropositive cases after a true infection) and more false
positives (i.e., seropositive cases after an immune boost). By definition of the PPV, these two effects
combined to diminish the PPV of serology in seroprevalence studies (as also observed in Fig. 3 and
Table 3).
In conclusion, these results illustrate how the complex interplay between waning immunity, immune
boosting, and the age -specific contact patterns and force of infection sensitively determines
seroprevalence and the reliability of seropositivity as an indicator of recent infection in seroprevalence
studies.
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Discussion
In this study, we aimed to evaluate the reliability of pertussis seroprevalence studies, particularly how
the well-documented phenomenon of immune boosting may lead such studies to overestimate pertussis
infections. To address this, we developed a new mode l of pertussis transmission that tracked the
dynamics of seroprevalence, enabling a comparison with empirical estimates from serosurveys. Fitting
this model to two large European serosurveys in the late wP era, we estimated infection -/wP-derived
immunity t o last, on average, for several decades. We then predicted the prevalence and PPV of
seropositivity among adult age groups in twelve countries broadly representative of transmission
patterns worldwide. Overall, we predicted a low PPV of serology for seropr evalence studies across
multiple scenarios, especially in young adults aged 20 –39 yr, where it fell below 50% in almost all
scenarios tested. We conclude that the issue of immune boosting is likely severe, making raw
seroprevalence estimates potentially misleading when interpreted in isolation. Our model can be useful
for analyzing seroprevalence data, ideally in conjunction with case-based incidence data to synthesize
all available evidence and derive more accurate estimates of pertussis infections.
When comparing our model to seroprevalence data from two large European serosurveys, we found the
best model-data agreement for average durations of infection -/wP-derived immunity of 30 –50 years
(uncertainty range: 20 –80 years). As our model did not includ e several real -world complexities of
pertussis (such as seasonality in transmission, variations in vaccine coverage or changes in demographic
structure), we emphasize this estimation is only approximate. Nevertheless, these durations are
consistent with previous estimates from immune-boosting models fitted to case report incidence data.
Wearing & Rohani estimated that durations of infection -/wP-derived immunity of 20 –40 yr best
reproduced the interepidemic periods, and of 40–100 yr the patterns of epidemic fade-outs observed in
the wP era in England and Wales (assuming an immune boosting level of 0.5) (47). Based on incidence
data in the prevaccine era in Copenhagen, Denmark, Lavine et al. estimated infection-derived immunity
to last on average 34 (95% CI: 17–66) years, a value well identified despite considerable uncertainty in
the immune-boosting parameter (6.6, 95% CI: 0.66 –66) (48). Using the same model, Rozhnova et al.
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found that an average duration infection-derived immunity of 40 years (assuming an immune boosting
coefficient of 1) resulted in periodic epidemic patterns consistent with those observed in the prevaccine
era in Ontario, Canada, and London, UK (62).
Although differences in model structure preclude an exact comparison of all available estimates, our
Results
add to the large body of modeling and epidemiological evidence about the long protection
conferred by natural infection and wP vaccines against pertussis and the marked impact of wP vaccines
on pertussis transmission (63–65). They also suggest that, due to immune boosting and the high
transmissibility of pertussis, seroprevalence estimates of a few percent in adults are expected for
imperfect yet highly effective vaccines, even in populations with near -perfect pediatric vacc ination
coverage.
In contrast to the duration of immunity, all tested values for immune boosting resulted in an equally
good model-data agreement. Hence, we could not estimate this parameter based on seroprevalence data
alone. Other attempts to identify this parameter based on incidence data yielded similarly uncertain
estimates (30, 48, 49) . A lower bound of 0.66 was identified in Lavine et al.’s study in Copenhagen
(48). A lower bound of 10 was estimated based on prevaccine era data in Massachusetts, USA (30), but
a subsequent study in the USA reported such levels to be too high to reproduce the observed patterns
of pertussis resurgence from the 1970s (52). Given this admittedly limited evidence, we believe the
range we considered (0.5 –5) is reasonable, but we acknowledge the remaining uncertainties.
Consequently, a promising avenue for future research will be to fit our model to multiple real -world
data so urces to more accurately estimate the level of immune boosting and the rates of pertussis
symptomatic and asymptomatic infections.
Our results suggest that interpreting raw estimates of pertussis seroprevalence is challenging, if not
impossible. Specifically, we find that the prevalence and reliability of seropositivity result from a
complex interplay between immune boosting, waning i mmunity, and age-specific contact patterns. In
particular, we predict that the PPV of serology in seroprevalence studies varies with age, with the lowest
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values in young adults (20–39 yo) who more often experience immune boosting. Strikingly, in almost
all scenarios tested, the PPV fell below 50% in this age group. In other words, interpreting seropositivity
as evidence of a recent infection may be incorrec t more than half of the time in this age group. This
finding is noteworthy, as our review showed that this interpretation was nearly universal in
seroprevalence studies. In the older age groups (40 –59 yo, 60–79 yo), the reliability of seropositivity
was better but still low in many scenarios, with the maximum PPV ranging from 27–40% at the highest
boosting level to 79 –85% at the lowest. Hence, in line with earlier suspicions (27–29) and empirical
evidence (26, 31, 32) , our results highlight that the issue of immune boosting is consequential when
analyzing pertussis seroprevalence data. More broadly, our study emphasizes the key difference
between exposure and infection, as seropositivity always indicates the former but not necessarily the
latter.
Another implication of our study is that comparing case report data to seroprevalence data will not yield
valid estimates of under -reporting. As immune boosting will generally cause seroprevalence to
overestimate true infection rates, this ratio will tend to underestimate the reporting probability or,
equivalently, overestimate under -reporting. This overestimation will, in turn, lead to an ove rly
pessimistic understanding of the impact of pertussis vaccines on pertussis circulation. Hence, our results
lead us to question the widespread, but likely misguided, narrative about the high circulation and
shortcomings of pertussis vaccines that has emerged from the analysis of multiple serosurveys.
Our study has several important limitations that relate to the formulation of our model. First, we
assumed that the serological parameters did not vary with age, as the serological data available (25) did
not permit an age -specific parametrization. However, age variations in the immune response —e.g.,
because of immunosenescence—may cause these parameters to differ between age groups, especially
in the elderly (66). Second, given the limited information in seroprevalence data, we made the
simplifying assumption that infection- and wP-derived immunities had identical properties (in terms of
immune boosting and duration of protection). This assumption is justified by epidemiological evidence
(49, 52) and immunological evidence showing that natural infection and wP vaccination trigger a similar
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immune response (50, 51) . Nevertheless, this assumption would be invalid for aP vaccines, which
trigger a different immune response (67) that may be less prone to subsequent boosting by natural
exposure (68). Epidemiological evidence also shows that these vaccines, though effective at reducing
transmission and inducing herd immunity (5, 69), confer shorter-lived protection against infection, with
waning rates of 2–10% per year (43, 44, 52, 70). Hence, extending our model to the aP era would require
a separate parametrization for infection/wP -derived aP -derived immunities. This complication
prevented us from considering more recent seroprevalence data, especially those from another large
serosurvey in adults aged 40 –59 conducted in 18 European countries in 2015 (41). Still, we note that
the seroprevalence estimates in this study (range: 2.7 –5.8% across 13/18 countries) were only
moderately larger than those considered here.
Other limitations of this study relate to our estimation method. First, we only considered data from two
large serosurveys conducted in European countries, as their serological results were standardized and
ensured comparability across countries. However, many other seroprevalence data are available and
could be used to estimate the parameters and test the predictions of our model (21). Nevertheless,
seroprevalences of similar magnitude (a few percent) have been estimated among adults in various other
countries (e.g., in Australia (71), Israel (72), Japan (21), and the USA (21)), so we believe our results
should remain robust even with the inclusion of additional data. Second, as discussed above, when
fitting our model to seroprevalence data, we did not consider seasonal or long-term parameter variations
that may affect seroprevalence. Thus, our estimates are approximate, though they generally agree with
previous estimates from more detailed models. Third, we assumed identical properties of wP vaccines
across the six countries, although these vaccines were produced by different n ational or commercial
manufacturers during the study period (53, 73). Finally, even though we tested a range of realistic
values, we could not estimate the strength of immune boosting, a parameter that sensitively controls the
prevalence and reliability of seropositivity. Acknowledging these limitations, our model could serve as
a building block to investigate the remaining unknowns in pertussis epidemiology.
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There is growing interest in collecting serological data to inform the immunity landscape and tap into
the “epidemiological dark matter” of infectious diseases (74–76). For pathogens with identified
correlates of protection (like neutralizing antibodies for measles and mumps (77, 78) ), serology is
relatively unequivocal and can directly inform specific variables of transmission models, such as
recovered or vaccinated compartments. In the case of pertussis and other pathogens (74), however, the
picture is much more complex, as seropositivity is not a marker of immunity but of recent exposure. As
a result, interpreting serological data is inherently ambiguous and requires careful consideration of
waning immunity and immune boosting using transmission models. Hence, our model —or variations
thereof—may prove useful for analyzing seroprevalence data and synthesizing evidence from other
sources, including case notification data. Eventually, fitting such models to all available data will
improve our estimates of pertussis infection rates and help resolve the ongoing disagreements within
the field.
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Acknowledgements
We thank Peter Teunis for sharing codes and data to estimate the serological parameters. This study
was funded by the Max Planck Society.
Data and code availability
All programming codes are currently available on GitHub
(https://gitfront.io/r/MDdC/xSdjztUmzRY3/Pertussis-seroprevalence/) and will be archived in
Edmond, the Open Data Repository of the Max Planck Society, after publication.
Competing interests
P.R. received funding from Sanofi for a research project on pertussis vaccines. All other others declare
no competing interests related to this study.
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Figures
Figure 1: Schematic representation of the serotransmission model. For clarity, only one age group
is depicted, and demographic transitions such as birth, aging, and death are not represented. The
serological parameters are highlighted in blue, and the seropositive states are circled in blue (see Table
S3 for the defini tion of all state variables). Following either primary (state variables 𝑆&, 𝐸&, 𝐼&) or
secondary infection (state variables 𝑆', 𝐸', 𝐼'), individuals are assumed to remain seropositive for an
average duration 𝑡! (state variable 𝑅(,&). Upon exposure to B. pertussis, seronegative individuals with
either infection -derived (state variable 𝑅) or vaccine -derived immunity (state variable 𝑉) against
infection may undergo an immune boost and become seropositive (state variables 𝑅( and 𝑉(,
respectively). State variables with an E index represent individuals exposed to B. pertussis and about to
seroconvert. The diagram highlights a key issue with seroprevalence studies: generally, seroprevalence
(represented as 𝑆" = 𝑅(,& + 𝑅(,' + 𝑉(, the sum of the blue states) includes both recent infections (𝑅(,&)
and immune boosts from individuals with immunity derived from earlier infection (𝑅(,') or vaccination
(𝑉(). Consequently, seropositivity does not always indicate a recent infection, which may lead to false
positives and a low positive predictive value (defined here as 𝑃𝑃𝑉 = 𝑅(,&/𝑆"). In this model, infections
are defined by their ability to transmit to other hosts, whereas immune boosts do not contribute to
transmission.
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Figure 2: Model fit to empirical seroprevalence data in six European countries . Abbreviations:
PPV: positive predictive value of serology; IU: international unit. The dashed line is the identity line,
representing a perfect match between the model and the data. The 2-letter codes indicate the countries
considered for model-data comparison: DE (East Germany), FI (Finland), FR (France), LT (Lithuania),
NL (Netherlands), and RO (Romania). The data and predictions represent seroprevalence in adults aged
20–39 in Lithuania and Romania (54) or 20–44 in other countries (53). For each immune-boosting level
(𝜌), the graph shows the model predictions for the duration of infection/wP -derived immunity that
produced the best fit to the seroprevalence data (see Table 2 for the corresponding value).
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Figure 3: Predicted seroprevalence in 12 representative countries . In each country, the location
(size) of the points indicates the median seroprevalence (PPV) from 200 simulation -years (10 model
simulations, each spanning 20 years). The panel title specifies the fixed value of the boosting coefficient
for infection- or vaccine-derived immunity (𝜌). The average duration of infection - or vaccine-derived
immunity was set to 𝛼%& = 40 years in all simulations, a value within the confidence interval for all
tested values of the boosting coefficient (see Table 2).
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Figure 4: Breakdown of seroprevalence and illustration of age-specific transmission dynamics in
the US. The values shown represent the median across 200 simulation years (derived from 10 model
simulations, each spanning 20 years) for six model variables indicated by the panels’ titles (see Figure
1 for the corresponding mathematical definitions indicated b etween parentheses). The color indicates
the fixed value of the boosting coefficient for infection - or vaccine -derived immunity ( 𝜌). In all
simulations, the average duration of infection- or vaccine-derived immunity was set to 𝛼%& = 40 years,
a value within the confidence interval for all tested values of the boosting coefficient (see Table 2). All
the variables are dimensionless except for the force of infection, which is expressed as a yearly rate.
The y-axis values differ between panels.
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Tables
Parameter Meaning Value(s) Source/Comment
𝜎%& Average latent period 8 days (43)
𝛾%& Average infectious period 15 days (43)
𝜃 Relative infectiousness of
secondary infections 0.99 (43)
𝑀*+ Social contact matrix Fig. S3
(46)
Country-specific
𝑅, Basic reproduction number 11–16 Country-specific
𝑡" Average time from exposure to
seroconversion 23 days (25)
𝑡!
Average duration of
seropositivity after
seroconversion
1 yr (seropositivity
cut-off of 100 IU/mL)
0.75 yr (seropositivity
cut-off of 125 IU/mL)
(25)
𝑝$ Effective vaccination coverage
(all doses) 0.9 Table S6
𝑣 Effective vaccination rate Calculated from 𝑝$ Supplementary
Methods
𝜌 Boosting coefficient of
infection/wP-derived immunity 0.5, 1, 2, 5
Range of values tested
based on earlier
studies (30, 47, 48, 62)
Assumption:
𝜌 = 𝜌$ = 𝜌#
𝛼%&
Average duration of
infection/wP-derived immunity
(if no immune boosting)
Estimated based on
empirical serosurveys
in the late wP era
Assumption:
𝛼%& = 𝛼$
%& = 𝛼#
%&
Table 1: Main model parameters.
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Table 2: Estimates of the average duration of immunity. MWSE stands for mean weighted squared
error, while PPV represents the positive predictive value of serology. The uncertainty interval indicates
the range of values for which the MWSE was not significantly different from zero. The PPV range
indicates the range of median PPV across the six countries included in the model-data comparison and
across scenarios where the MWSE was non-significant.
Fixed value
of boosting
coefficient
(𝜌)
Estimate (uncertainty interval)
of the average duration of
infection/wP-derived immunity
(𝛼%&), years
MWSE, % PPV range, %
0.5 30 (20–40) –0.4 47–62
1.0 30 (30–50) 0.0 29–41
2.0 40 (30–60) –0.1 16–27
5.0 50 (40–80) 0.1 6–12
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Table 3: Predicted seroprevalence and positive predictive value of serology across 12
representative countries . The values indicate the median (95% prediction intervals) from 200
simulation years (10 model simulations, each spanning 20 years) across the 12 countries.
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S1 E1 I1 RP,1 RE
S2 E2 I2 R RP,2
V VE VP
1/tp
1/tn
1/tp
1/tn
λ
λ σ
σ
ρV λ
ρRλ
v
v
γ
αV
αR
1/tn
Seroconversion (true infection)
Seroconversion (immune boost)
Seroreversion
Seropositive (true infection)
Seropositive (immune boost)
Vaccination
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FI
FRDE
LT
NL
RO
FI
FR
DE
LT
NL
RO
FI
FR
DE
LT
NL
RO
FI
FR
DE
LT
NL
RO
ρ = 2 ρ = 5
ρ = 0.5 ρ = 1
0 2 4 6 0 2 4 6
0
2
4
6
8
0
2
4
6
8
Observed seroprevalence (%)
Predicted seroprevalence (%)
PPV (%)
10 20 30 40 50
IgG seropositivity threshold 100 IU/mL 125 IU/mL
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ρ = 2 ρ = 5
ρ = 0.5 ρ = 1
0.5 1.0 1.5 2.0 2.5 0.5 1.0 1.5 2.0 2.5
UK
USA
Switzerland
Sweden
Netherlands
Japan
Israel
India
Germany
Denmark
Czechia
China
UK
USA
Switzerland
Sweden
Netherlands
Japan
Israel
India
Germany
Denmark
Czechia
China
Seroprevalence (%)
Country
Age group (yrs) 20−39 40−59 60−79 PPV (%) 20 40 60 80
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Fraction immune to infection (V + R) Seroprevalence from immune boosts (VP + RP2)
Fraction susceptible to infection (S1 + S2) Seroprevalence from true infections (RP1)
Force of Infection (λ) Overall seroprevalence
20−39 40−59 60−79 20−39 40−59 60−79
0.5
1.0
1.5
2.0
0.2
0.3
0.0
0.5
1.0
1.5
0.2
0.4
0.6
40
50
60
30
40
50
60
Age group (yrs)
Value (%)
Boosting coefficient (ρ) 0.5 1 2 5
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