Trans-complementation by the RecB nuclease domain of RecBCD enzyme reveals new insight into RecA loading upon χ recognition
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Abstract
Summary The loading of RecA onto ssDNA by RecBCD is an essential step of RecBCD-mediated homologous recombination. RecBCD facilitates RecA-loading onto ssDNA in a χ-dependent manner via its RecB nuclease domain (RecB n ). Before recognition of χ, RecB n is sequestered through interactions with RecBCD. It was proposed that upon χ-recognition, RecB n undocks, allowing RecB n to swing out via a contiguous 70 amino acid linker to reveal the RecA-loading surface, and then recruit and load RecA onto ssDNA. We tested this hypothesis by examining the interactions between RecB n (RecB 928–1180 ) and truncated RecBCD (RecB 1–927 CD) lacking the nuclease domain. The reconstituted complex of RecB 1–927 CD and RecB n is functional in vitro and in vivo . Our results indicate that despite being covalently severed from RecB 1–927 CD, RecB n can still load RecA onto ssDNA, establishing that RecB n does not function at the end of its flexible linker. Instead, RecBCD undergoes a χ-induced intramolecular rearrangement to reveal a RecA-loading surface.
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