{"paper_id":"f1205973-b316-4e9e-bf58-074cd983f92b","body_text":"Published January 5, 2024\n| Version v1\nDataset\nOpen\nOscillatory dynamics of mRNA metabolism and chromatin accessibility in mESCs during the cell cycle\nAuthors/Creators\nDescription\nProcessed single-cell RNAseq and multiome sequencing--single-nucleus RNAseq and ATACseq for mESCs\n| Filename | Description |\n| scrna_deepdycle.h5ad | single-cell RNAseq data, has information about unsplcied and spliced levels and the inferred cell cycle phase |\n| snrna_deepdycle_rep1.h5ad | single-nulceus RNAseq data (replicate 1), has information about unsplcied and spliced levels and the inferred cell cycle phase |\n| snrna_deepdycle_rep2.h5ad | single-nulceus RNAseq data (replicate 2), has information about unsplcied and spliced levels and the inferred cell cycle phase |\n| body_coverage_lif1.tsv.gz | single nucleus ATACseq data (replicate 1), counts table of ATACseq peaks mapped to the genes |\n| body_coverage_lif2.tsv.gz | single nucleus ATACseq data (replicate 2), counts table of ATACseq peaks mapped to the genes |\n| model_predictions.zip | gene-wise predictions for gene expression--unspliced and spliced, and mRNA metabolism rates--synthesis, splicing, export, and degradation rates for single-cell and single-nucleus data |\nFiles\nmodel_predictions.zip\nFiles\n(2.4 GB)\n| Name | Size | Download all |\n|---|---|---|\n|\nmd5:1a8aa0b0879c42e92e187b15899e2759\n|\n42.0 MB | Download |\n|\nmd5:56c577bee80eab1bef94022a56e5dfe6\n|\n44.1 MB | Download |\n|\nmd5:8fbbda62f90aef11f48ee7fc62fe9c45\n|\n125.9 MB | Preview Download |\n|\nmd5:a520f23a14954a64a9f977818cc37c9c\n|\n829.4 MB | Download |\n|\nmd5:61fb5ec86486c2a0c53a94adc728139a\n|\n683.2 MB | Download |\n|\nmd5:9dbdfc9bd2f48faf3e8b444a2c2260c2\n|\n698.1 MB | Download |","source_license":"CC0","license_restricted":false}